RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene SWS2, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWS2YNL081C IFH1P39520 1085 aa7.1□□□□□ -1.27
SWS2YNL081C YNL035CP53962 389 aaKnown RBP7.1□□□□□ -1.27
SWS2YNL081C JIP4Q03361 876 aa7.1□□□□□ -1.27
SWS2YNL081C RTG1P32607 177 aa7.08□□□□□ -1.28
SWS2YNL081C PTC4P38089 393 aa7.08□□□□□ -1.28
SWS2YNL081C SEC61P32915 480 aa7.07□□□□□ -1.28
SWS2YNL081C FKH1P40466 484 aa7.07□□□□□ -1.28
SWS2YNL081C TFG1P41895 735 aaPredicted RBP7.07□□□□□ -1.28
SWS2YNL081C NCR1Q12200 1170 aa7.07□□□□□ -1.28
SWS2YNL081C YEL023CP39992 682 aa7.06□□□□□ -1.28
SWS2YNL081C YJL171CP46992 396 aa7.06□□□□□ -1.28
SWS2YNL081C AIR2Q12476 344 aaKnown RBP7.04□□□□□ -1.28
SWS2YNL081C DAN4P47179 1161 aa7.02□□□□□ -1.29
SWS2YNL081C YGR273CP53329 174 aa6.98□□□□□ -1.29
SWS2YNL081C BMT6Q12291 365 aa6.98□□□□□ -1.29
SWS2YNL081C AI4P03878 556 aa6.96□□□□□ -1.3
SWS2YNL081C MPH3P0CE00 602 aa6.96□□□□□ -1.3
SWS2YNL081C SOL3P38858 249 aa6.96□□□□□ -1.3
SWS2YNL081C YPR148CQ06523 435 aa6.96□□□□□ -1.3
SWS2YNL081C NST1P53935 1240 aa6.95□□□□□ -1.3
SWS2YNL081C VPS70P47161 811 aa6.94□□□□□ -1.3
SWS2YNL081C YDL129WQ07555 291 aa6.94□□□□□ -1.3
SWS2YNL081C CKB1P43639 278 aa6.91□□□□□ -1.3
SWS2YNL081C PML39Q03760 334 aa6.91□□□□□ -1.3
SWS2YNL081C REF2P42073 533 aaPredicted RBP6.9□□□□□ -1.3
SWS2YNL081C SAS10Q12136 610 aaPredicted RBP6.9□□□□□ -1.3
SWS2YNL081C SAP30P38429 201 aa6.89□□□□□ -1.31
SWS2YNL081C KEX1P09620 729 aa6.87□□□□□ -1.31
SWS2YNL081C UBP14P38237 781 aaKnown RBP6.87□□□□□ -1.31
SWS2YNL081C VHR2P40041 505 aa6.87□□□□□ -1.31
SWS2YNL081C KIC1P38692 1080 aa6.85□□□□□ -1.31
SWS2YNL081C PEX29Q03370 554 aa6.84□□□□□ -1.31
SWS2YNL081C YLR326WQ06170 240 aaKnown RBP6.84□□□□□ -1.31
SWS2YNL081C RAD54P32863 898 aa6.83□□□□□ -1.32
SWS2YNL081C ILV3P39522 585 aaKnown RBP6.83□□□□□ -1.32
SWS2YNL081C MID1P41821 548 aa6.83□□□□□ -1.32
SWS2YNL081C MAK21Q12176 1025 aaKnown RBP6.83□□□□□ -1.32
SWS2YNL081C RPP1BP10622 106 aaKnown RBP6.81□□□□□ -1.32
SWS2YNL081C SLI15P38283 698 aa6.81□□□□□ -1.32
SWS2YNL081C COX6P00427 148 aa6.79□□□□□ -1.32
SWS2YNL081C CHL1P22516 861 aaPredicted RBP6.79□□□□□ -1.32
SWS2YNL081C PCS60P38137 543 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
SWS2YNL081C ELP4Q02884 456 aaKnown RBP6.79□□□□□ -1.32
SWS2YNL081C PRE3P38624 215 aa6.78□□□□□ -1.32
SWS2YNL081C ARH1P48360 493 aa6.78□□□□□ -1.32
SWS2YNL081C PBS2P08018 668 aa6.77□□□□□ -1.33
SWS2YNL081C SPB4P25808 606 aaPredicted RBP6.77□□□□□ -1.33
SWS2YNL081C YDR090CQ03193 310 aa6.77□□□□□ -1.33
SWS2YNL081C DPL1Q05567 589 aa6.77□□□□□ -1.33
SWS2YNL081C MPC54Q08550 464 aa6.75□□□□□ -1.33
SWS2YNL081C NMA111P53920 997 aa6.74□□□□□ -1.33
SWS2YNL081C HAP5Q02516 242 aa6.74□□□□□ -1.33
SWS2YNL081C SPT23P35210 1082 aa6.72□□□□□ -1.33
SWS2YNL081C ISU2Q12056 156 aa6.72□□□□□ -1.33
SWS2YNL081C DSF2P38213 736 aa6.7□□□□□ -1.34
SWS2YNL081C CDC73Q06697 393 aa6.7□□□□□ -1.34
SWS2YNL081C MAM3Q12296 706 aa6.7□□□□□ -1.34
SWS2YNL081C PEX21P50091 288 aa6.68□□□□□ -1.34
SWS2YNL081C BNI4P53858 892 aa6.68□□□□□ -1.34
SWS2YNL081C CSC1Q06538 782 aa6.68□□□□□ -1.34
SWS2YNL081C YDR344CQ05510 147 aa6.66□□□□□ -1.34
SWS2YNL081C BCK2P33306 851 aa6.65□□□□□ -1.34
SWS2YNL081C PTC2P39966 464 aaKnown RBP6.65□□□□□ -1.34
SWS2YNL081C TFB4Q12004 338 aa6.65□□□□□ -1.34
SWS2YNL081C ORC6P38826 435 aa6.63□□□□□ -1.35
SWS2YNL081C YML082WQ04533 649 aaKnown RBP6.63□□□□□ -1.35
SWS2YNL081C GAP1P19145 602 aaPredicted RBP6.62□□□□□ -1.35
SWS2YNL081C VRP1P37370 817 aa6.62□□□□□ -1.35
SWS2YNL081C IES2P40154 320 aa6.61□□□□□ -1.35
SWS2YNL081C PSE1P32337 1089 aaKnown RBP6.6□□□□□ -1.35
SWS2YNL081C MVP1P40959 511 aaKnown RBP6.59□□□□□ -1.35
SWS2YNL081C TUM1Q08686 304 aaKnown RBP6.59□□□□□ -1.35
SWS2YNL081C YRR1Q12172 810 aa6.59□□□□□ -1.35
SWS2YNL081C RGR1P19263 1082 aa6.58□□□□□ -1.36
SWS2YNL081C NUP42P49686 430 aaKnown RBP6.56□□□□□ -1.36
SWS2YNL081C YPR109WQ06104 294 aa6.56□□□□□ -1.36
SWS2YNL081C XDJ1P39102 459 aa6.55□□□□□ -1.36
SWS2YNL081C PDR1P12383 1068 aa6.54□□□□□ -1.36
SWS2YNL081C DIT2P21595 489 aa6.54□□□□□ -1.36
SWS2YNL081C CLB5P30283 435 aa6.54□□□□□ -1.36
SWS2YNL081C NPL4P33755 580 aa6.54□□□□□ -1.36
SWS2YNL081C RAM1P22007 431 aa6.52□□□□□ -1.37
SWS2YNL081C YNR021WP53723 404 aaKnown RBP6.51□□□□□ -1.37
SWS2YNL081C LEU3P08638 886 aa6.5□□□□□ -1.37
SWS2YNL081C NUD1P32336 851 aa6.5□□□□□ -1.37
SWS2YNL081C TEA1P47988 759 aa6.5□□□□□ -1.37
SWS2YNL081C ATF2P53296 535 aa6.5□□□□□ -1.37
SWS2YNL081C GYP1Q08484 637 aa6.5□□□□□ -1.37
SWS2YNL081C SAS4Q04003 481 aa6.49□□□□□ -1.37
SWS2YNL081C YPR015CQ12531 247 aa6.47□□□□□ -1.37
SWS2YNL081C PRT1P06103 763 aaKnown RBP6.45□□□□□ -1.38
SWS2YNL081C GCD11P32481 527 aaKnown RBP6.45□□□□□ -1.38
SWS2YNL081C ISM1P48526 1002 aa6.45□□□□□ -1.38
SWS2YNL081C BUD20Q08004 166 aaPredicted RBP6.45□□□□□ -1.38
SWS2YNL081C STR2P47164 639 aa6.44□□□□□ -1.38
SWS2YNL081C MRF1P30775 413 aaPredicted RBP6.43□□□□□ -1.38
SWS2YNL081C GLC3P32775 704 aa6.42□□□□□ -1.38
SWS2YNL081C RPN1P38764 993 aaKnown RBP6.42□□□□□ -1.38
SWS2YNL081C AIM7Q12156 149 aa6.42□□□□□ -1.38
SWS2YNL081C PAT1P25644 796 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms