RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene SWS2, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWS2YNL081C MTC1P47018 478 aaKnown RBP11.86□□□□□ -0.51
SWS2YNL081C DRS1P32892 752 aaKnown RBP11.49□□□□□ -0.57
SWS2YNL081C FAP1P53971 965 aa10.28□□□□□ -0.76
SWS2YNL081C DIP2Q12220 943 aaPredicted RBP9.94□□□□□ -0.82
SWS2YNL081C ISW2Q08773 1120 aa9.82□□□□□ -0.84
SWS2YNL081C PRI1P10363 409 aa9.78□□□□□ -0.84
SWS2YNL081C BFR2Q06631 534 aaKnown RBP9.75□□□□□ -0.85
SWS2YNL081C AAD16Q02895 342 aa9.72□□□□□ -0.85
SWS2YNL081C AVT3P36062 692 aa9.65□□□□□ -0.86
SWS2YNL081C RPG1P38249 964 aaKnown RBP9.65□□□□□ -0.86
SWS2YNL081C PRY3P47033 881 aa9.61□□□□□ -0.87
SWS2YNL081C RSE1Q04693 1361 aaKnown RBP9.52□□□□□ -0.88
SWS2YNL081C TSR3Q12094 313 aaKnown RBP9.25□□□□□ -0.93
SWS2YNL081C RPL17AP05740 184 aaKnown RBP9.17□□□□□ -0.94
SWS2YNL081C RPL17BP46990 184 aaKnown RBP9.17□□□□□ -0.94
SWS2YNL081C REB1P21538 810 aa9.13□□□□□ -0.95
SWS2YNL081C HAA1Q12753 694 aaKnown RBP9.1□□□□□ -0.95
SWS2YNL081C MRPL32P25348 183 aa8.97□□□□□ -0.97
SWS2YNL081C YCK3P39962 524 aa8.96□□□□□ -0.98
SWS2YNL081C TFA1P36100 482 aa8.87□□□□□ -0.99
SWS2YNL081C SPT21P35209 758 aa8.74□□□□□ -1.01
SWS2YNL081C RIM101P33400 625 aa8.57□□□□□ -1.04
SWS2YNL081C YKR023WP36119 530 aaKnown RBP8.57□□□□□ -1.04
SWS2YNL081C YGL015CP33199 130 aa8.52□□□□□ -1.05
SWS2YNL081C CDC27P38042 758 aa8.48□□□□□ -1.05
SWS2YNL081C TFC8Q12308 588 aa8.42□□□□□ -1.06
SWS2YNL081C HOP09932 586 aa8.4□□□□□ -1.06
SWS2YNL081C DCD1P06773 312 aa8.31□□□□□ -1.08
SWS2YNL081C OXP1P28273 1286 aa8.27□□□□□ -1.09
SWS2YNL081C UBP10P53874 792 aaPredicted RBP8.27□□□□□ -1.09
SWS2YNL081C YIL055CP40523 627 aaKnown RBP8.26□□□□□ -1.09
SWS2YNL081C MAP2P38174 421 aaKnown RBP8.2□□□□□ -1.1
SWS2YNL081C PTP3P40048 928 aa8.19□□□□□ -1.1
SWS2YNL081C BCH2P36122 765 aa8.16□□□□□ -1.1
SWS2YNL081C SCY1P53009 804 aa8.12□□□□□ -1.11
SWS2YNL081C YAH1Q12184 172 aaKnown RBP8.1□□□□□ -1.11
SWS2YNL081C RSM7P47150 247 aa8.09□□□□□ -1.11
SWS2YNL081C SLX5P32828 619 aaKnown RBP8.03□□□□□ -1.12
SWS2YNL081C SSP1P38871 571 aa8.02□□□□□ -1.13
SWS2YNL081C BBC1P47068 1157 aa8□□□□□ -1.13
SWS2YNL081C TIF4632P39936 914 aaKnown RBP7.99□□□□□ -1.13
SWS2YNL081C EPS1P40557 701 aa7.99□□□□□ -1.13
SWS2YNL081C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
SWS2YNL081C YLR271WQ06152 274 aa7.97□□□□□ -1.13
SWS2YNL081C AI2P03876 854 aa7.96□□□□□ -1.14
SWS2YNL081C BDF1P35817 686 aa7.94□□□□□ -1.14
SWS2YNL081C TGL3P40308 642 aa7.93□□□□□ -1.14
SWS2YNL081C PSD2P53037 1138 aaKnown RBP7.81□□□□□ -1.16
SWS2YNL081C MGA2P40578 1113 aa7.8□□□□□ -1.16
SWS2YNL081C MRM1P25270 412 aa7.68□□□□□ -1.18
SWS2YNL081C CST9Q06032 482 aa7.68□□□□□ -1.18
SWS2YNL081C NSR1P27476 414 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18 RIP-Chip
SWS2YNL081C YAP5P40574 245 aa7.64□□□□□ -1.19
SWS2YNL081C YOR238WQ08634 303 aa7.64□□□□□ -1.19
SWS2YNL081C UBP9P39967 754 aa7.61□□□□□ -1.19
SWS2YNL081C MST1P07236 462 aa7.6□□□□□ -1.19
SWS2YNL081C RTG3P38165 486 aa7.6□□□□□ -1.19
SWS2YNL081C BUD31P25337 157 aaPredicted RBP7.57□□□□□ -1.2
SWS2YNL081C YMR1P47147 688 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
SWS2YNL081C VPS29P38759 282 aa7.49□□□□□ -1.21
SWS2YNL081C GTT3P39996 337 aa7.47□□□□□ -1.21
SWS2YNL081C DBP1P24784 617 aaKnown RBP7.45□□□□□ -1.22
SWS2YNL081C RCR1P38212 213 aa7.44□□□□□ -1.22
SWS2YNL081C PIB1Q06651 286 aa7.43□□□□□ -1.22
SWS2YNL081C YFR006WP43590 535 aa7.39□□□□□ -1.23
SWS2YNL081C STS1P38637 319 aa7.38□□□□□ -1.23
SWS2YNL081C YBL029C-AQ3E756 94 aa7.38□□□□□ -1.23
SWS2YNL081C WSC3Q12215 556 aa7.37□□□□□ -1.23
SWS2YNL081C RAM2P29703 316 aa7.36□□□□□ -1.23
SWS2YNL081C VNX1P42839 908 aa7.36□□□□□ -1.23
SWS2YNL081C MAK11P20484 414 aaKnown RBP7.34□□□□□ -1.23
SWS2YNL081C VMA1P17255 1071 aaKnown RBP7.33□□□□□ -1.24
SWS2YNL081C SPP1Q03012 353 aa7.33□□□□□ -1.24
SWS2YNL081C SIS1P25294 352 aaKnown RBP7.3□□□□□ -1.24
SWS2YNL081C MSB4Q12317 492 aa7.3□□□□□ -1.24
SWS2YNL081C TIF11P38912 153 aaKnown RBP7.29□□□□□ -1.24
SWS2YNL081C EAP1P36041 632 aaKnown RBP7.28□□□□□ -1.24
SWS2YNL081C SAM3Q08986 587 aa7.28□□□□□ -1.24
SWS2YNL081C MIF2P35201 549 aa7.26□□□□□ -1.25
SWS2YNL081C YOL036WQ08206 761 aa7.25□□□□□ -1.25
SWS2YNL081C SET4P42948 560 aa7.24□□□□□ -1.25
SWS2YNL081C ABP1P15891 592 aaKnown RBP7.23□□□□□ -1.25
SWS2YNL081C COQ8P27697 501 aa7.23□□□□□ -1.25
SWS2YNL081C ULI1P43604 169 aa7.23□□□□□ -1.25
SWS2YNL081C GYP5Q12344 894 aa7.23□□□□□ -1.25
SWS2YNL081C NOP53Q12080 455 aaKnown RBP7.22□□□□□ -1.25
SWS2YNL081C GRE2Q12068 342 aaKnown RBP7.19□□□□□ -1.26
SWS2YNL081C RQC2Q12532 1038 aaKnown RBP7.19□□□□□ -1.26
SWS2YNL081C PTC3P34221 468 aaKnown RBP7.17□□□□□ -1.26
SWS2YNL081C SET1P38827 1080 aaKnown RBP7.17□□□□□ -1.26
SWS2YNL081C EDS1P38073 919 aa7.16□□□□□ -1.26
SWS2YNL081C ATH1P48016 1211 aa7.16□□□□□ -1.26
SWS2YNL081C IOC2Q12072 812 aa7.16□□□□□ -1.26
SWS2YNL081C TRP5P00931 707 aaKnown RBP7.15□□□□□ -1.26
SWS2YNL081C HTA1P04911 132 aaKnown RBP7.15□□□□□ -1.26
SWS2YNL081C HTA2P04912 132 aa7.15□□□□□ -1.26
SWS2YNL081C GUT1P32190 709 aa7.14□□□□□ -1.27
SWS2YNL081C DCW1P36091 449 aa7.14□□□□□ -1.27
SWS2YNL081C LDB19Q12502 818 aa7.14□□□□□ -1.27
SWS2YNL081C DMA1P38823 416 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms