RNA–Protein interactions for RNA: YMR131C

RRB1, Transcript of Nuclear protein involved in early steps of ribosome biogenesis, yeastyeast

Gene RRB1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRB1YMR131C RTG3P38165 486 aa8.56□□□□□ -1.04
RRB1YMR131C STS1P38637 319 aa8.56□□□□□ -1.04
RRB1YMR131C YEL023CP39992 682 aa8.55□□□□□ -1.04
RRB1YMR131C ELP4Q02884 456 aaKnown RBP8.54□□□□□ -1.04
RRB1YMR131C DCW1P36091 449 aa8.52□□□□□ -1.05
RRB1YMR131C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
RRB1YMR131C SRC1Q03707 834 aa8.41□□□□□ -1.06
RRB1YMR131C PML39Q03760 334 aa8.41□□□□□ -1.06
RRB1YMR131C YDR344CQ05510 147 aa8.4□□□□□ -1.06
RRB1YMR131C ARH1P48360 493 aa8.39□□□□□ -1.07
RRB1YMR131C SPT23P35210 1082 aa8.33□□□□□ -1.08
RRB1YMR131C CST9Q06032 482 aa8.27□□□□□ -1.09
RRB1YMR131C GRE2Q12068 342 aaKnown RBP8.24□□□□□ -1.09
RRB1YMR131C MGA2P40578 1113 aa8.24□□□□□ -1.09
RRB1YMR131C SSP1P38871 571 aa8.23□□□□□ -1.09
RRB1YMR131C RCR1P38212 213 aa8.21□□□□□ -1.1
RRB1YMR131C PEX29Q03370 554 aa8.19□□□□□ -1.1
RRB1YMR131C MID1P41821 548 aa8.18□□□□□ -1.1
RRB1YMR131C YML082WQ04533 649 aaKnown RBP8.18□□□□□ -1.1
RRB1YMR131C TFA1P36100 482 aa8.17□□□□□ -1.1
RRB1YMR131C HAP5Q02516 242 aa8.16□□□□□ -1.1
RRB1YMR131C BNI4P53858 892 aa8.15□□□□□ -1.1
RRB1YMR131C PTC2P39966 464 aaKnown RBP8.13□□□□□ -1.11
RRB1YMR131C GUT1P32190 709 aa8.11□□□□□ -1.11
RRB1YMR131C ATH1P48016 1211 aa8.11□□□□□ -1.11
RRB1YMR131C RAS1P01119 309 aa8.07□□□□□ -1.12
RRB1YMR131C TRK1P12685 1235 aa8.06□□□□□ -1.12
RRB1YMR131C NST1P53935 1240 aa8.02□□□□□ -1.13
RRB1YMR131C YPL062WQ02781 134 aa8.02□□□□□ -1.13
RRB1YMR131C AI4P03878 556 aa8.01□□□□□ -1.13
RRB1YMR131C MPH3P0CE00 602 aa8.01□□□□□ -1.13
RRB1YMR131C MON2P48563 1636 aaPredicted RBP7.98□□□□□ -1.13
RRB1YMR131C PTC3P34221 468 aaKnown RBP7.98□□□□□ -1.13
RRB1YMR131C MIF2P35201 549 aa7.98□□□□□ -1.13
RRB1YMR131C SGS1P35187 1447 aa7.97□□□□□ -1.13
RRB1YMR131C AMS1P22855 1083 aa7.93□□□□□ -1.14
RRB1YMR131C SOL3P38858 249 aa7.92□□□□□ -1.14
RRB1YMR131C MPC54Q08550 464 aa7.92□□□□□ -1.14
RRB1YMR131C NMA111P53920 997 aa7.9□□□□□ -1.14
RRB1YMR131C EDS1P38073 919 aa7.88□□□□□ -1.15
RRB1YMR131C INO80P53115 1489 aa7.86□□□□□ -1.15
RRB1YMR131C MAK11P20484 414 aaKnown RBP7.85□□□□□ -1.15
RRB1YMR131C GYP1Q08484 637 aa7.84□□□□□ -1.15
RRB1YMR131C ILV3P39522 585 aaKnown RBP7.83□□□□□ -1.16
RRB1YMR131C DPL1Q05567 589 aa7.8□□□□□ -1.16
RRB1YMR131C YPR015CQ12531 247 aa7.78□□□□□ -1.16
RRB1YMR131C SAS4Q04003 481 aa7.78□□□□□ -1.16
RRB1YMR131C GBP2P25555 427 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
RRB1YMR131C YEL077CQ3E7X8 1277 aa7.75□□□□□ -1.17
RRB1YMR131C TCB3Q03640 1545 aaKnown RBP7.74□□□□□ -1.17
RRB1YMR131C RAM1P22007 431 aa7.73□□□□□ -1.17
RRB1YMR131C YGR273CP53329 174 aa7.73□□□□□ -1.17
RRB1YMR131C ISU2Q12056 156 aa7.73□□□□□ -1.17
RRB1YMR131C COQ8P27697 501 aa7.72□□□□□ -1.17
RRB1YMR131C SLI15P38283 698 aa7.71□□□□□ -1.18
RRB1YMR131C GCR2Q01722 534 aa7.7□□□□□ -1.18
RRB1YMR131C GAR1P28007 205 aaKnown RBP7.69□□□□□ -1.18
RRB1YMR131C SPA2P23201 1466 aaKnown RBP7.68□□□□□ -1.18
RRB1YMR131C MRF1P30775 413 aaPredicted RBP7.66□□□□□ -1.18
RRB1YMR131C BRE2P43132 505 aa7.66□□□□□ -1.18
RRB1YMR131C NOP53Q12080 455 aaKnown RBP7.65□□□□□ -1.18
RRB1YMR131C SDH2P21801 266 aa7.64□□□□□ -1.19
RRB1YMR131C RAM2P29703 316 aa7.64□□□□□ -1.19
RRB1YMR131C SSN2P38931 1420 aa7.63□□□□□ -1.19
RRB1YMR131C TY1B-DR4Q07793 1604 aa7.62□□□□□ -1.19
RRB1YMR131C DNA2P38859 1522 aa7.57□□□□□ -1.2
RRB1YMR131C PDR1P12383 1068 aa7.52□□□□□ -1.21
RRB1YMR131C HSL1P34244 1518 aa7.5□□□□□ -1.21
RRB1YMR131C SPT6P23615 1451 aaKnown RBP7.49□□□□□ -1.21
RRB1YMR131C CDC73Q06697 393 aa7.49□□□□□ -1.21
RRB1YMR131C ERG12P07277 443 aa7.48□□□□□ -1.21
RRB1YMR131C KEX1P09620 729 aa7.46□□□□□ -1.22
RRB1YMR131C SWR1Q05471 1514 aa7.44□□□□□ -1.22
RRB1YMR131C PRT1P06103 763 aaKnown RBP7.43□□□□□ -1.22
RRB1YMR131C RPP1BP10622 106 aaKnown RBP7.43□□□□□ -1.22
RRB1YMR131C AIR1P40507 360 aaKnown RBP7.43□□□□□ -1.22
RRB1YMR131C MET22P32179 357 aa7.42□□□□□ -1.22
RRB1YMR131C ENV9Q08651 330 aa7.42□□□□□ -1.22
RRB1YMR131C BUD20Q08004 166 aaPredicted RBP7.39□□□□□ -1.23
RRB1YMR131C HIR3P47171 1648 aa7.37□□□□□ -1.23
RRB1YMR131C CDC4P07834 779 aa7.36□□□□□ -1.23
RRB1YMR131C XRN1P22147 1528 aaKnown RBP7.35□□□□□ -1.23
RRB1YMR131C KOG1P38873 1557 aa7.34□□□□□ -1.23
RRB1YMR131C CLA4P48562 842 aa7.34□□□□□ -1.23
RRB1YMR131C CST6P40535 587 aa7.33□□□□□ -1.24
RRB1YMR131C MTC5Q03897 1148 aa7.33□□□□□ -1.24
RRB1YMR131C YDR444WQ04093 687 aa7.32□□□□□ -1.24
RRB1YMR131C LAM6Q08001 693 aa7.3□□□□□ -1.24
RRB1YMR131C REV3P14284 1504 aa7.25□□□□□ -1.25
RRB1YMR131C SPT16P32558 1035 aaKnown RBP7.25□□□□□ -1.25
RRB1YMR131C YLR326WQ06170 240 aaKnown RBP7.25□□□□□ -1.25
RRB1YMR131C PEX21P50091 288 aa7.24□□□□□ -1.25
RRB1YMR131C YRR1Q12172 810 aa7.24□□□□□ -1.25
RRB1YMR131C THO2P53552 1597 aaKnown RBP7.24□□□□□ -1.25
RRB1YMR131C RAD54P32863 898 aa7.23□□□□□ -1.25
RRB1YMR131C UBP14P38237 781 aaKnown RBP7.23□□□□□ -1.25
RRB1YMR131C STR2P47164 639 aa7.23□□□□□ -1.25
RRB1YMR131C LCB5Q06147 687 aaKnown RBP7.23□□□□□ -1.25
RRB1YMR131C ISM1P48526 1002 aa7.22□□□□□ -1.25
RRB1YMR131C PCS60P38137 543 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms