RNA–Protein interactions for RNA: YMR131C

RRB1, Transcript of Nuclear protein involved in early steps of ribosome biogenesis, yeastyeast

Gene RRB1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRB1YMR131C FAP1P53971 965 aa15.17■□□□□ 0.02
RRB1YMR131C MTC1P47018 478 aaKnown RBP14.83□□□□□ -0.04
RRB1YMR131C PRY3P47033 881 aa14.3□□□□□ -0.12
RRB1YMR131C AAD16Q02895 342 aa13.59□□□□□ -0.23
RRB1YMR131C PRI1P10363 409 aa13.42□□□□□ -0.26
RRB1YMR131C HAA1Q12753 694 aaKnown RBP13.42□□□□□ -0.26
RRB1YMR131C YCK3P39962 524 aa13.33□□□□□ -0.28
RRB1YMR131C ISW2Q08773 1120 aa12.72□□□□□ -0.37
RRB1YMR131C RPG1P38249 964 aaKnown RBP12.57□□□□□ -0.4
RRB1YMR131C TSR3Q12094 313 aaKnown RBP12.55□□□□□ -0.4
RRB1YMR131C DRS1P32892 752 aaKnown RBP12.25□□□□□ -0.45
RRB1YMR131C MRPL32P25348 183 aa12.17□□□□□ -0.46
RRB1YMR131C YGL015CP33199 130 aa12.16□□□□□ -0.46
RRB1YMR131C BUD31P25337 157 aaPredicted RBP11.8□□□□□ -0.52
RRB1YMR131C RSE1Q04693 1361 aaKnown RBP11.45□□□□□ -0.58
RRB1YMR131C DIP2Q12220 943 aaPredicted RBP11.34□□□□□ -0.59
RRB1YMR131C REB1P21538 810 aa11.28□□□□□ -0.6
RRB1YMR131C UBP10P53874 792 aaPredicted RBP11.16□□□□□ -0.62
RRB1YMR131C CDC27P38042 758 aa11.15□□□□□ -0.62
RRB1YMR131C RPL17AP05740 184 aaKnown RBP11.14□□□□□ -0.63
RRB1YMR131C RPL17BP46990 184 aaKnown RBP11.14□□□□□ -0.63
RRB1YMR131C SIS1P25294 352 aaKnown RBP11.11□□□□□ -0.63
RRB1YMR131C MAP2P38174 421 aaKnown RBP11.01□□□□□ -0.65
RRB1YMR131C UBP9P39967 754 aa10.94□□□□□ -0.66
RRB1YMR131C TIF4632P39936 914 aaKnown RBP10.77□□□□□ -0.69
RRB1YMR131C YKR023WP36119 530 aaKnown RBP10.75□□□□□ -0.69
RRB1YMR131C TGL3P40308 642 aa10.74□□□□□ -0.69
RRB1YMR131C TFC8Q12308 588 aa10.57□□□□□ -0.72
RRB1YMR131C SLX5P32828 619 aaKnown RBP10.54□□□□□ -0.72
RRB1YMR131C SCY1P53009 804 aa10.53□□□□□ -0.72
RRB1YMR131C HOP09932 586 aa10.53□□□□□ -0.72
RRB1YMR131C SPT21P35209 758 aa10.5□□□□□ -0.73
RRB1YMR131C DCD1P06773 312 aa10.47□□□□□ -0.73
RRB1YMR131C AVT3P36062 692 aa10.45□□□□□ -0.74
RRB1YMR131C BCH2P36122 765 aa10.15□□□□□ -0.78
RRB1YMR131C YBL029C-AQ3E756 94 aa10.08□□□□□ -0.8
RRB1YMR131C MST1P07236 462 aa10.07□□□□□ -0.8
RRB1YMR131C YOR238WQ08634 303 aa9.97□□□□□ -0.81
RRB1YMR131C VNX1P42839 908 aa9.95□□□□□ -0.82
RRB1YMR131C YJL171CP46992 396 aa9.92□□□□□ -0.82
RRB1YMR131C SPP1Q03012 353 aa9.89□□□□□ -0.83
RRB1YMR131C RIM101P33400 625 aa9.83□□□□□ -0.84
RRB1YMR131C AIR2Q12476 344 aaKnown RBP9.82□□□□□ -0.84
RRB1YMR131C BDF1P35817 686 aa9.79□□□□□ -0.84
RRB1YMR131C EPS1P40557 701 aa9.78□□□□□ -0.84
RRB1YMR131C NSR1P27476 414 aaKnown RBP RIP-Chip data9.77□□□□□ -0.84not detected
RRB1YMR131C FKH1P40466 484 aa9.74□□□□□ -0.85
RRB1YMR131C WSC3Q12215 556 aa9.71□□□□□ -0.86
RRB1YMR131C TIF11P38912 153 aaKnown RBP9.68□□□□□ -0.86
RRB1YMR131C YAP5P40574 245 aa9.66□□□□□ -0.86
RRB1YMR131C BMT6Q12291 365 aa9.61□□□□□ -0.87
RRB1YMR131C GTT3P39996 337 aa9.52□□□□□ -0.88
RRB1YMR131C LDB19Q12502 818 aa9.51□□□□□ -0.89
RRB1YMR131C ULI1P43604 169 aa9.46□□□□□ -0.9
RRB1YMR131C BFR2Q06631 534 aaKnown RBP9.43□□□□□ -0.9
RRB1YMR131C BBC1P47068 1157 aa9.42□□□□□ -0.9
RRB1YMR131C IOC2Q12072 812 aa9.42□□□□□ -0.9
RRB1YMR131C OXP1P28273 1286 aa9.4□□□□□ -0.91
RRB1YMR131C PTP3P40048 928 aa9.38□□□□□ -0.91
RRB1YMR131C YIL055CP40523 627 aaKnown RBP9.38□□□□□ -0.91
RRB1YMR131C EAP1P36041 632 aaKnown RBP9.27□□□□□ -0.93
RRB1YMR131C MSB4Q12317 492 aa9.25□□□□□ -0.93
RRB1YMR131C AI2P03876 854 aa9.23□□□□□ -0.93
RRB1YMR131C NCR1Q12200 1170 aa9.23□□□□□ -0.93
RRB1YMR131C RTG1P32607 177 aa9.21□□□□□ -0.93
RRB1YMR131C RSM7P47150 247 aa9.21□□□□□ -0.93
RRB1YMR131C SEC61P32915 480 aa9.12□□□□□ -0.95
RRB1YMR131C BCK2P33306 851 aa9.1□□□□□ -0.95
RRB1YMR131C YNL035CP53962 389 aaKnown RBP9.1□□□□□ -0.95
RRB1YMR131C PIB1Q06651 286 aa9.1□□□□□ -0.95
RRB1YMR131C TRP5P00931 707 aaKnown RBP9.08□□□□□ -0.96
RRB1YMR131C TFG1P41895 735 aaPredicted RBP9.05□□□□□ -0.96
RRB1YMR131C SET4P42948 560 aa9.01□□□□□ -0.97
RRB1YMR131C YOL036WQ08206 761 aa9.01□□□□□ -0.97
RRB1YMR131C CHL1P22516 861 aaPredicted RBP8.98□□□□□ -0.97
RRB1YMR131C SAP30P38429 201 aa8.92□□□□□ -0.98
RRB1YMR131C RGA2Q06407 1009 aa8.92□□□□□ -0.98
RRB1YMR131C YAH1Q12184 172 aaKnown RBP8.9□□□□□ -0.98
RRB1YMR131C PRE3P38624 215 aa8.87□□□□□ -0.99
RRB1YMR131C YDL129WQ07555 291 aa8.85□□□□□ -0.99
RRB1YMR131C JIP4Q03361 876 aa8.84□□□□□ -0.99
RRB1YMR131C XDJ1P39102 459 aa8.83□□□□□ -1
RRB1YMR131C DAN4P47179 1161 aa8.8□□□□□ -1
RRB1YMR131C MRM1P25270 412 aa8.8□□□□□ -1
RRB1YMR131C SAM3Q08986 587 aa8.79□□□□□ -1
RRB1YMR131C YMR1P47147 688 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
RRB1YMR131C PSD2P53037 1138 aaKnown RBP8.77□□□□□ -1.01
RRB1YMR131C VMA1P17255 1071 aaKnown RBP8.75□□□□□ -1.01
RRB1YMR131C DBP1P24784 617 aaKnown RBP8.74□□□□□ -1.01
RRB1YMR131C ABP1P15891 592 aaKnown RBP8.72□□□□□ -1.01
RRB1YMR131C VRP1P37370 817 aa8.72□□□□□ -1.01
RRB1YMR131C YLR271WQ06152 274 aa8.7□□□□□ -1.02
RRB1YMR131C DPS1P04802 557 aaKnown RBP8.68□□□□□ -1.02
RRB1YMR131C RGA1P39083 1007 aa8.66□□□□□ -1.02
RRB1YMR131C PTC4P38089 393 aa8.64□□□□□ -1.03
RRB1YMR131C VPS29P38759 282 aa8.64□□□□□ -1.03
RRB1YMR131C YFR006WP43590 535 aa8.64□□□□□ -1.03
RRB1YMR131C HTA1P04911 132 aaKnown RBP8.61□□□□□ -1.03
RRB1YMR131C HTA2P04912 132 aa8.61□□□□□ -1.03
RRB1YMR131C GYP5Q12344 894 aa8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms