RNA–Protein interactions for RNA: YML116W

ATR1, Transcript of Multidrug efflux pump of the major facilitator superfamily, yeastyeast

Gene ATR1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATR1YML116W MAM3Q12296 706 aa8.36□□□□□ -1.07
ATR1YML116W GRE2Q12068 342 aaKnown RBP8.35□□□□□ -1.07
ATR1YML116W ATH1P48016 1211 aa8.34□□□□□ -1.07
ATR1YML116W SPT6P23615 1451 aaKnown RBP8.34□□□□□ -1.08
ATR1YML116W GUT1P32190 709 aa8.33□□□□□ -1.08
ATR1YML116W IES2P40154 320 aa8.33□□□□□ -1.08
ATR1YML116W COX6P00427 148 aa8.32□□□□□ -1.08
ATR1YML116W UBP14P38237 781 aaKnown RBP8.32□□□□□ -1.08
ATR1YML116W NUP42P49686 430 aaKnown RBP8.32□□□□□ -1.08
ATR1YML116W DIT2P21595 489 aa8.32□□□□□ -1.08
ATR1YML116W YNR021WP53723 404 aaKnown RBP8.32□□□□□ -1.08
ATR1YML116W VHR2P40041 505 aa8.31□□□□□ -1.08
ATR1YML116W YDR090CQ03193 310 aa8.3□□□□□ -1.08
ATR1YML116W MAK21Q12176 1025 aaKnown RBP8.3□□□□□ -1.08
ATR1YML116W SOL3P38858 249 aa8.29□□□□□ -1.08
ATR1YML116W GYP5Q12344 894 aa8.29□□□□□ -1.08
ATR1YML116W GLC3P32775 704 aa8.28□□□□□ -1.08
ATR1YML116W GTT3P39996 337 aa8.28□□□□□ -1.08
ATR1YML116W YLR326WQ06170 240 aaKnown RBP8.28□□□□□ -1.08
ATR1YML116W YGR273CP53329 174 aa8.27□□□□□ -1.09
ATR1YML116W YOL036WQ08206 761 aa8.25□□□□□ -1.09
ATR1YML116W KIN1P13185 1064 aa8.25□□□□□ -1.09
ATR1YML116W NST1P53935 1240 aa8.24□□□□□ -1.09
ATR1YML116W SET4P42948 560 aa8.23□□□□□ -1.09
ATR1YML116W DCW1P36091 449 aa8.22□□□□□ -1.09
ATR1YML116W KEX1P09620 729 aa8.21□□□□□ -1.1
ATR1YML116W AIM7Q12156 149 aa8.21□□□□□ -1.1
ATR1YML116W SPA2P23201 1466 aaKnown RBP8.21□□□□□ -1.1
ATR1YML116W HIR3P47171 1648 aa8.2□□□□□ -1.1
ATR1YML116W PCS60P38137 543 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
ATR1YML116W RAD54P32863 898 aa8.16□□□□□ -1.1
ATR1YML116W WSC3Q12215 556 aa8.16□□□□□ -1.1
ATR1YML116W ILV3P39522 585 aaKnown RBP8.15□□□□□ -1.1
ATR1YML116W HTA1P04911 132 aaKnown RBP8.14□□□□□ -1.11
ATR1YML116W HTA2P04912 132 aa8.14□□□□□ -1.11
ATR1YML116W KIC1P38692 1080 aa8.14□□□□□ -1.11
ATR1YML116W ATF2P53296 535 aa8.14□□□□□ -1.11
ATR1YML116W ECM5Q03214 1411 aa8.14□□□□□ -1.11
ATR1YML116W MSB4Q12317 492 aa8.14□□□□□ -1.11
ATR1YML116W MPH3P0CE00 602 aa8.11□□□□□ -1.11
ATR1YML116W GUA1P38625 525 aaKnown RBP8.11□□□□□ -1.11
ATR1YML116W THO2P53552 1597 aaKnown RBP8.1□□□□□ -1.11
ATR1YML116W AI4P03878 556 aa8.1□□□□□ -1.11
ATR1YML116W YBL029C-AQ3E756 94 aa8.1□□□□□ -1.11
ATR1YML116W ORC6P38826 435 aa8.08□□□□□ -1.12
ATR1YML116W YEL023CP39992 682 aa8.08□□□□□ -1.12
ATR1YML116W PSE1P32337 1089 aaKnown RBP8.07□□□□□ -1.12
ATR1YML116W VNX1P42839 908 aa8.07□□□□□ -1.12
ATR1YML116W BUD4P47136 1447 aa8.06□□□□□ -1.12
ATR1YML116W TRP5P00931 707 aaKnown RBP8.06□□□□□ -1.12
ATR1YML116W DAN4P47179 1161 aa8.05□□□□□ -1.12
ATR1YML116W EAP1P36041 632 aaKnown RBP8.03□□□□□ -1.12
ATR1YML116W SLI15P38283 698 aa8.03□□□□□ -1.12
ATR1YML116W XRN1P22147 1528 aaKnown RBP8.02□□□□□ -1.13
ATR1YML116W RGR1P19263 1082 aa8.02□□□□□ -1.13
ATR1YML116W PTC4P38089 393 aa8.02□□□□□ -1.13
ATR1YML116W MDS3P53094 1487 aa8.02□□□□□ -1.13
ATR1YML116W YML020WQ03722 664 aa8□□□□□ -1.13
ATR1YML116W GAP1P19145 602 aaPredicted RBP8□□□□□ -1.13
ATR1YML116W TIF11P38912 153 aaKnown RBP8□□□□□ -1.13
ATR1YML116W MVP1P40959 511 aaKnown RBP8□□□□□ -1.13
ATR1YML116W ULI1P43604 169 aa8□□□□□ -1.13
ATR1YML116W PEP1P32319 1579 aa7.99□□□□□ -1.13
ATR1YML116W HPC2Q01448 625 aa7.97□□□□□ -1.13
ATR1YML116W CDC73Q06697 393 aa7.97□□□□□ -1.13
ATR1YML116W IOC2Q12072 812 aa7.97□□□□□ -1.13
ATR1YML116W TEA1P47988 759 aa7.96□□□□□ -1.13
ATR1YML116W SPP1Q03012 353 aa7.96□□□□□ -1.13
ATR1YML116W JIP4Q03361 876 aa7.96□□□□□ -1.13
ATR1YML116W ATG2P53855 1592 aa7.96□□□□□ -1.14
ATR1YML116W HGH1P48362 394 aaKnown RBP7.96□□□□□ -1.14
ATR1YML116W TFB3Q03290 321 aa7.95□□□□□ -1.14
ATR1YML116W CSN12P47130 423 aa7.94□□□□□ -1.14
ATR1YML116W KTR1P27810 393 aaKnown RBP7.93□□□□□ -1.14
ATR1YML116W UBP9P39967 754 aa7.92□□□□□ -1.14
ATR1YML116W MID1P41821 548 aa7.92□□□□□ -1.14
ATR1YML116W CSC1Q06538 782 aa7.92□□□□□ -1.14
ATR1YML116W NOP8Q08287 484 aaPredicted RBP7.92□□□□□ -1.14
ATR1YML116W YPR109WQ06104 294 aa7.91□□□□□ -1.14
ATR1YML116W PKC1P24583 1151 aa7.9□□□□□ -1.14
ATR1YML116W YNL035CP53962 389 aaKnown RBP7.9□□□□□ -1.14
ATR1YML116W ORC1P54784 914 aaPredicted RBP7.9□□□□□ -1.14
ATR1YML116W PML39Q03760 334 aa7.9□□□□□ -1.14
ATR1YML116W TYW1Q08960 810 aaKnown RBP7.9□□□□□ -1.14
ATR1YML116W NIS1P53939 407 aa7.89□□□□□ -1.15
ATR1YML116W CLB5P30283 435 aa7.89□□□□□ -1.15
ATR1YML116W REV3P14284 1504 aa7.89□□□□□ -1.15
ATR1YML116W SSA2P10592 639 aaKnown RBP7.88□□□□□ -1.15
ATR1YML116W AIM44Q99299 758 aa7.88□□□□□ -1.15
ATR1YML116W RPP1BP10622 106 aaKnown RBP7.87□□□□□ -1.15
ATR1YML116W MPC54Q08550 464 aa7.87□□□□□ -1.15
ATR1YML116W TFB4Q12004 338 aa7.87□□□□□ -1.15
ATR1YML116W LDB19Q12502 818 aa7.87□□□□□ -1.15
ATR1YML116W FPK1P53739 893 aa7.86□□□□□ -1.15
ATR1YML116W SSN2P38931 1420 aa7.86□□□□□ -1.15
ATR1YML116W RTG1P32607 177 aa7.85□□□□□ -1.15
ATR1YML116W BRL1P38770 471 aa7.85□□□□□ -1.15
ATR1YML116W SLX8P40072 274 aa7.85□□□□□ -1.15
ATR1YML116W DPL1Q05567 589 aa7.85□□□□□ -1.15
ATR1YML116W TUM1Q08686 304 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms