RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C MAK21Q12176 1025 aaKnown RBP6.44□□□□□ -1.38
VPS33YLR396C UBP14P38237 781 aaKnown RBP6.43□□□□□ -1.38
VPS33YLR396C NST1P53935 1240 aa6.43□□□□□ -1.38
VPS33YLR396C COX6P00427 148 aa6.43□□□□□ -1.38
VPS33YLR396C HTA1P04911 132 aaKnown RBP6.43□□□□□ -1.38
VPS33YLR396C HTA2P04912 132 aa6.43□□□□□ -1.38
VPS33YLR396C VHR2P40041 505 aa6.43□□□□□ -1.38
VPS33YLR396C VNX1P42839 908 aa6.43□□□□□ -1.38
VPS33YLR396C YDR090CQ03193 310 aa6.42□□□□□ -1.38
VPS33YLR396C YLR326WQ06170 240 aaKnown RBP6.42□□□□□ -1.38
VPS33YLR396C MAM3Q12296 706 aa6.42□□□□□ -1.38
VPS33YLR396C RPN1P38764 993 aaKnown RBP6.41□□□□□ -1.38
VPS33YLR396C UBP9P39967 754 aa6.41□□□□□ -1.38
VPS33YLR396C EAP1P36041 632 aaKnown RBP6.39□□□□□ -1.39
VPS33YLR396C KEX1P09620 729 aa6.38□□□□□ -1.39
VPS33YLR396C IES2P40154 320 aa6.38□□□□□ -1.39
VPS33YLR396C TIF11P38912 153 aaKnown RBP6.37□□□□□ -1.39
VPS33YLR396C NUP42P49686 430 aaKnown RBP6.37□□□□□ -1.39
VPS33YLR396C TRP5P00931 707 aaKnown RBP6.37□□□□□ -1.39
VPS33YLR396C YEL023CP39992 682 aa6.37□□□□□ -1.39
VPS33YLR396C AI4P03878 556 aa6.36□□□□□ -1.39
VPS33YLR396C MPH3P0CE00 602 aa6.36□□□□□ -1.39
VPS33YLR396C YNR021WP53723 404 aaKnown RBP6.36□□□□□ -1.39
VPS33YLR396C PCS60P38137 543 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
VPS33YLR396C ILV3P39522 585 aaKnown RBP6.35□□□□□ -1.39
VPS33YLR396C ULI1P43604 169 aa6.35□□□□□ -1.39
VPS33YLR396C SPP1Q03012 353 aa6.35□□□□□ -1.39
VPS33YLR396C DIT2P21595 489 aa6.34□□□□□ -1.39
VPS33YLR396C RAD54P32863 898 aa6.34□□□□□ -1.39
VPS33YLR396C PTC4P38089 393 aa6.33□□□□□ -1.4
VPS33YLR396C KIC1P38692 1080 aa6.33□□□□□ -1.4
VPS33YLR396C IOC2Q12072 812 aa6.33□□□□□ -1.4
VPS33YLR396C DAN4P47179 1161 aa6.31□□□□□ -1.4
VPS33YLR396C JIP4Q03361 876 aa6.31□□□□□ -1.4
VPS33YLR396C BUD31P25337 157 aaPredicted RBP6.3□□□□□ -1.4
VPS33YLR396C GLC3P32775 704 aa6.3□□□□□ -1.4
VPS33YLR396C AIM7Q12156 149 aa6.29□□□□□ -1.4
VPS33YLR396C SLI15P38283 698 aa6.27□□□□□ -1.41
VPS33YLR396C YNL035CP53962 389 aaKnown RBP6.27□□□□□ -1.41
VPS33YLR396C LDB19Q12502 818 aa6.27□□□□□ -1.41
VPS33YLR396C ORC6P38826 435 aa6.26□□□□□ -1.41
VPS33YLR396C KIN1P13185 1064 aa6.26□□□□□ -1.41
VPS33YLR396C PSE1P32337 1089 aaKnown RBP6.25□□□□□ -1.41
VPS33YLR396C RTG1P32607 177 aa6.23□□□□□ -1.41
VPS33YLR396C SEC61P32915 480 aa6.23□□□□□ -1.41
VPS33YLR396C GAP1P19145 602 aaPredicted RBP6.22□□□□□ -1.41
VPS33YLR396C ATF2P53296 535 aa6.22□□□□□ -1.41
VPS33YLR396C TAF7Q05021 590 aa6.21□□□□□ -1.41
VPS33YLR396C PML39Q03760 334 aa6.21□□□□□ -1.42
VPS33YLR396C RGR1P19263 1082 aa6.19□□□□□ -1.42
VPS33YLR396C MID1P41821 548 aa6.19□□□□□ -1.42
VPS33YLR396C CDC73Q06697 393 aa6.19□□□□□ -1.42
VPS33YLR396C MVP1P40959 511 aaKnown RBP6.19□□□□□ -1.42
VPS33YLR396C RPP1BP10622 106 aaKnown RBP6.18□□□□□ -1.42
VPS33YLR396C CSC1Q06538 782 aa6.18□□□□□ -1.42
VPS33YLR396C FKH1P40466 484 aa6.17□□□□□ -1.42
VPS33YLR396C NCR1Q12200 1170 aa6.17□□□□□ -1.42
VPS33YLR396C DMA2P53924 522 aa6.16□□□□□ -1.42
VPS33YLR396C MPC54Q08550 464 aa6.16□□□□□ -1.42
VPS33YLR396C DPL1Q05567 589 aa6.15□□□□□ -1.42
VPS33YLR396C TEA1P47988 759 aa6.14□□□□□ -1.43
VPS33YLR396C YDL129WQ07555 291 aa6.14□□□□□ -1.43
VPS33YLR396C TFG1P41895 735 aaPredicted RBP6.14□□□□□ -1.43
VPS33YLR396C TFB4Q12004 338 aa6.14□□□□□ -1.43
VPS33YLR396C CLB5P30283 435 aa6.13□□□□□ -1.43
VPS33YLR396C GUA1P38625 525 aaKnown RBP6.13□□□□□ -1.43
VPS33YLR396C PEX29Q03370 554 aa6.13□□□□□ -1.43
VPS33YLR396C YPR109WQ06104 294 aa6.12□□□□□ -1.43
VPS33YLR396C AIR2Q12476 344 aaKnown RBP6.12□□□□□ -1.43
VPS33YLR396C PEX21P50091 288 aa6.1□□□□□ -1.43
VPS33YLR396C ISU2Q12056 156 aa6.1□□□□□ -1.43
VPS33YLR396C NMA111P53920 997 aa6.1□□□□□ -1.43
VPS33YLR396C TUM1Q08686 304 aaKnown RBP6.09□□□□□ -1.43
VPS33YLR396C SAP30P38429 201 aa6.08□□□□□ -1.44
VPS33YLR396C NIS1P53939 407 aa6.08□□□□□ -1.44
VPS33YLR396C HPC2Q01448 625 aa6.08□□□□□ -1.44
VPS33YLR396C CSN12P47130 423 aa6.07□□□□□ -1.44
VPS33YLR396C YDR344CQ05510 147 aa6.06□□□□□ -1.44
VPS33YLR396C YRR1Q12172 810 aa6.06□□□□□ -1.44
VPS33YLR396C ARH1P48360 493 aa6.06□□□□□ -1.44
VPS33YLR396C FPK1P53739 893 aa6.05□□□□□ -1.44
VPS33YLR396C HAP5Q02516 242 aa6.05□□□□□ -1.44
VPS33YLR396C SIS1P25294 352 aaKnown RBP6.05□□□□□ -1.44
VPS33YLR396C KTR1P27810 393 aaKnown RBP6.05□□□□□ -1.44
VPS33YLR396C SSA2P10592 639 aaKnown RBP6.04□□□□□ -1.44
VPS33YLR396C SIT4P20604 311 aa6.03□□□□□ -1.44
VPS33YLR396C HST2P53686 357 aa6.03□□□□□ -1.44
VPS33YLR396C TYW1Q08960 810 aaKnown RBP6.03□□□□□ -1.44
VPS33YLR396C TFB3Q03290 321 aa6.02□□□□□ -1.45
VPS33YLR396C HGH1P48362 394 aaKnown RBP6.02□□□□□ -1.45
VPS33YLR396C YMR196WQ04336 1088 aa6.02□□□□□ -1.45
VPS33YLR396C PDR1P12383 1068 aa6.01□□□□□ -1.45
VPS33YLR396C GLN1P32288 370 aaKnown RBP6.01□□□□□ -1.45
VPS33YLR396C BNI4P53858 892 aa6□□□□□ -1.45
VPS33YLR396C BMT6Q12291 365 aa6□□□□□ -1.45
VPS33YLR396C NUD1P32336 851 aa6□□□□□ -1.45
VPS33YLR396C MMP1Q12372 583 aa5.99□□□□□ -1.45
VPS33YLR396C SCJ1P25303 377 aa5.98□□□□□ -1.45
VPS33YLR396C BRL1P38770 471 aa5.98□□□□□ -1.45
VPS33YLR396C YJL171CP46992 396 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms