RNA–Protein interactions for RNA: YLR368W

MDM30, Transcript of F-box component of an SCF ubiquitin protein ligase complex, yeastyeast

Gene MDM30, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDM30YLR368W MSB4Q12317 492 aa5.87□□□□□ -1.47
MDM30YLR368W SAS10Q12136 610 aaPredicted RBP5.86□□□□□ -1.47
MDM30YLR368W LDB19Q12502 818 aa5.86□□□□□ -1.47
MDM30YLR368W VMA1P17255 1071 aaKnown RBP5.85□□□□□ -1.47
MDM30YLR368W YOL036WQ08206 761 aa5.85□□□□□ -1.47
MDM30YLR368W MDG1P53885 366 aa5.84□□□□□ -1.47
MDM30YLR368W BRL1P38770 471 aa5.83□□□□□ -1.48
MDM30YLR368W SET4P42948 560 aa5.83□□□□□ -1.48
MDM30YLR368W EAP1P36041 632 aaKnown RBP5.83□□□□□ -1.48
MDM30YLR368W SAM3Q08986 587 aa5.83□□□□□ -1.48
MDM30YLR368W RAM2P29703 316 aa5.8□□□□□ -1.48
MDM30YLR368W TRP5P00931 707 aaKnown RBP5.8□□□□□ -1.48
MDM30YLR368W YJL171CP46992 396 aa5.79□□□□□ -1.48
MDM30YLR368W CWC22P53333 577 aaKnown RBP5.78□□□□□ -1.48
MDM30YLR368W RTG1P32607 177 aa5.75□□□□□ -1.49
MDM30YLR368W SWE1P32944 819 aa5.75□□□□□ -1.49
MDM30YLR368W GIN4Q12263 1142 aa5.75□□□□□ -1.49
MDM30YLR368W NUG1P40010 520 aaKnown RBP5.75□□□□□ -1.49
MDM30YLR368W MAK11P20484 414 aaKnown RBP5.74□□□□□ -1.49
MDM30YLR368W YNL035CP53962 389 aaKnown RBP5.73□□□□□ -1.49
MDM30YLR368W BMT6Q12291 365 aa5.73□□□□□ -1.49
MDM30YLR368W SEC61P32915 480 aa5.72□□□□□ -1.49
MDM30YLR368W RPN1P38764 993 aaKnown RBP5.72□□□□□ -1.49
MDM30YLR368W SUB1P54000 292 aaKnown RBP5.72□□□□□ -1.49
MDM30YLR368W NCR1Q12200 1170 aa5.72□□□□□ -1.49
MDM30YLR368W GYP5Q12344 894 aa5.72□□□□□ -1.49
MDM30YLR368W VPS72Q03388 795 aa5.71□□□□□ -1.5
MDM30YLR368W YML020WQ03722 664 aa5.71□□□□□ -1.5
MDM30YLR368W DAN4P47179 1161 aa5.7□□□□□ -1.5
MDM30YLR368W SET1P38827 1080 aaKnown RBP5.68□□□□□ -1.5
MDM30YLR368W ATG36P46983 293 aa5.67□□□□□ -1.5
MDM30YLR368W HTA1P04911 132 aaKnown RBP5.67□□□□□ -1.5
MDM30YLR368W HTA2P04912 132 aa5.67□□□□□ -1.5
MDM30YLR368W ASF1P32447 279 aa5.67□□□□□ -1.5
MDM30YLR368W DCW1P36091 449 aa5.67□□□□□ -1.5
MDM30YLR368W JIP4Q03361 876 aa5.67□□□□□ -1.5
MDM30YLR368W HIF1Q12373 385 aa5.67□□□□□ -1.5
MDM30YLR368W YPR148CQ06523 435 aa5.65□□□□□ -1.5
MDM30YLR368W NOP53Q12080 455 aaKnown RBP5.65□□□□□ -1.5
MDM30YLR368W TOA1P32773 286 aa5.65□□□□□ -1.51
MDM30YLR368W RTS3P53289 263 aa5.65□□□□□ -1.51
MDM30YLR368W RLP24Q07915 199 aaKnown RBP5.65□□□□□ -1.51
MDM30YLR368W EDS1P38073 919 aa5.64□□□□□ -1.51
MDM30YLR368W YEL023CP39992 682 aa5.64□□□□□ -1.51
MDM30YLR368W NOP7P53261 605 aaKnown RBP5.64□□□□□ -1.51
MDM30YLR368W TPO2P53283 614 aa5.64□□□□□ -1.51
MDM30YLR368W LAM6Q08001 693 aa5.64□□□□□ -1.51
MDM30YLR368W NOP8Q08287 484 aaPredicted RBP5.64□□□□□ -1.51
MDM30YLR368W COQ8P27697 501 aa5.63□□□□□ -1.51
MDM30YLR368W MIF2P35201 549 aa5.63□□□□□ -1.51
MDM30YLR368W PTC4P38089 393 aa5.63□□□□□ -1.51
MDM30YLR368W GRE2Q12068 342 aaKnown RBP5.62□□□□□ -1.51
MDM30YLR368W TFG1P41895 735 aaPredicted RBP5.62□□□□□ -1.51
MDM30YLR368W PTC3P34221 468 aaKnown RBP5.61□□□□□ -1.51
MDM30YLR368W DEF1P35732 738 aaKnown RBP5.6□□□□□ -1.51
MDM30YLR368W PSH1Q12161 406 aa5.6□□□□□ -1.51
MDM30YLR368W BRN1P38170 754 aa5.6□□□□□ -1.51
MDM30YLR368W SAP30P38429 201 aa5.6□□□□□ -1.51
MDM30YLR368W VPS70P47161 811 aa5.6□□□□□ -1.51
MDM30YLR368W YDL129WQ07555 291 aa5.6□□□□□ -1.51
MDM30YLR368W OSW7P43611 510 aa5.59□□□□□ -1.51
MDM30YLR368W YJR008WP47085 338 aa5.59□□□□□ -1.51
MDM30YLR368W GUT1P32190 709 aa5.58□□□□□ -1.52
MDM30YLR368W CKB1P43639 278 aa5.57□□□□□ -1.52
MDM30YLR368W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
MDM30YLR368W ATH1P48016 1211 aa5.57□□□□□ -1.52
MDM30YLR368W NST1P53935 1240 aa5.57□□□□□ -1.52
MDM30YLR368W BUD21Q08492 214 aaPredicted RBP5.57□□□□□ -1.52
MDM30YLR368W FAR11P53917 953 aa5.57□□□□□ -1.52
MDM30YLR368W SLX8P40072 274 aa5.56□□□□□ -1.52
MDM30YLR368W SOL3P38858 249 aa5.55□□□□□ -1.52
MDM30YLR368W NHA1Q99271 985 aa5.54□□□□□ -1.52
MDM30YLR368W YTA7P40340 1379 aa5.54□□□□□ -1.52
MDM30YLR368W SPC42P36094 363 aa5.53□□□□□ -1.52
MDM30YLR368W GEF1P37020 779 aa5.53□□□□□ -1.52
MDM30YLR368W SSF1P38789 453 aaPredicted RBP5.53□□□□□ -1.52
MDM30YLR368W CHL1P22516 861 aaPredicted RBP5.52□□□□□ -1.53
MDM30YLR368W SPT16P32558 1035 aaKnown RBP5.52□□□□□ -1.53
MDM30YLR368W ISW1P38144 1129 aa5.52□□□□□ -1.53
MDM30YLR368W PML39Q03760 334 aa5.52□□□□□ -1.53
MDM30YLR368W RPS0AP32905 252 aaKnown RBP5.52□□□□□ -1.53
MDM30YLR368W PRE3P38624 215 aa5.52□□□□□ -1.53
MDM30YLR368W NOP2P40991 618 aaKnown RBP5.52□□□□□ -1.53
MDM30YLR368W MPP10P47083 593 aaKnown RBP5.52□□□□□ -1.53
MDM30YLR368W KIP3P53086 805 aaKnown RBP5.52□□□□□ -1.53
MDM30YLR368W SPB4P25808 606 aaPredicted RBP5.51□□□□□ -1.53
MDM30YLR368W NAB3P38996 802 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
MDM30YLR368W YDR344CQ05510 147 aa5.51□□□□□ -1.53
MDM30YLR368W PDR1P12383 1068 aa5.5□□□□□ -1.53
MDM30YLR368W DSF2P38213 736 aa5.5□□□□□ -1.53
MDM30YLR368W MET10P39692 1035 aa5.5□□□□□ -1.53
MDM30YLR368W ZDS1P50111 915 aaKnown RBP5.5□□□□□ -1.53
MDM30YLR368W SSA1P10591 642 aaKnown RBP5.49□□□□□ -1.53
MDM30YLR368W SSA2P10592 639 aaKnown RBP5.49□□□□□ -1.53
MDM30YLR368W MPH3P0CE00 602 aa5.48□□□□□ -1.53
MDM30YLR368W AIM21P40563 679 aa5.48□□□□□ -1.53
MDM30YLR368W DOS2P54858 310 aa5.48□□□□□ -1.53
MDM30YLR368W TLG1Q03322 224 aa5.48□□□□□ -1.53
MDM30YLR368W AI4P03878 556 aa5.47□□□□□ -1.53
MDM30YLR368W FPR3P38911 411 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms