RNA–Protein interactions for RNA: YLR368W

MDM30, Transcript of F-box component of an SCF ubiquitin protein ligase complex, yeastyeast

Gene MDM30, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDM30YLR368W MTC1P47018 478 aaKnown RBP9.6□□□□□ -0.87
MDM30YLR368W DRS1P32892 752 aaKnown RBP8.94□□□□□ -0.98
MDM30YLR368W FAP1P53971 965 aa8.68□□□□□ -1.02
MDM30YLR368W PRY3P47033 881 aa8.17□□□□□ -1.1
MDM30YLR368W PRI1P10363 409 aa8.15□□□□□ -1.11
MDM30YLR368W AAD16Q02895 342 aa8.08□□□□□ -1.12
MDM30YLR368W ISW2Q08773 1120 aa7.95□□□□□ -1.14
MDM30YLR368W RPG1P38249 964 aaKnown RBP7.88□□□□□ -1.15
MDM30YLR368W DIP2Q12220 943 aaPredicted RBP7.83□□□□□ -1.16
MDM30YLR368W YCK3P39962 524 aa7.79□□□□□ -1.16
MDM30YLR368W BFR2Q06631 534 aaKnown RBP7.74□□□□□ -1.17
MDM30YLR368W RQC2Q12532 1038 aaKnown RBP7.69□□□□□ -1.18
MDM30YLR368W TSR3Q12094 313 aaKnown RBP7.68□□□□□ -1.18
MDM30YLR368W HAA1Q12753 694 aaKnown RBP7.67□□□□□ -1.18
MDM30YLR368W RSE1Q04693 1361 aaKnown RBP7.57□□□□□ -1.2
MDM30YLR368W AVT3P36062 692 aa7.55□□□□□ -1.2
MDM30YLR368W TFA1P36100 482 aa7.47□□□□□ -1.21
MDM30YLR368W TAF7Q05021 590 aa7.41□□□□□ -1.22
MDM30YLR368W MRPL32P25348 183 aa7.36□□□□□ -1.23
MDM30YLR368W RPL17AP05740 184 aaKnown RBP7.33□□□□□ -1.24
MDM30YLR368W RPL17BP46990 184 aaKnown RBP7.33□□□□□ -1.24
MDM30YLR368W REB1P21538 810 aa7.29□□□□□ -1.24
MDM30YLR368W YGL015CP33199 130 aa7.08□□□□□ -1.28
MDM30YLR368W SPT21P35209 758 aa7.05□□□□□ -1.28
MDM30YLR368W CDC27P38042 758 aa7.02□□□□□ -1.29
MDM30YLR368W YKR023WP36119 530 aaKnown RBP7□□□□□ -1.29
MDM30YLR368W TFC8Q12308 588 aa6.84□□□□□ -1.31
MDM30YLR368W HOP09932 586 aa6.82□□□□□ -1.32
MDM30YLR368W UBP10P53874 792 aaPredicted RBP6.81□□□□□ -1.32
MDM30YLR368W DCD1P06773 312 aa6.8□□□□□ -1.32
MDM30YLR368W RIM101P33400 625 aa6.8□□□□□ -1.32
MDM30YLR368W MAP2P38174 421 aaKnown RBP6.8□□□□□ -1.32
MDM30YLR368W URN1Q06525 465 aaKnown RBP6.72□□□□□ -1.33
MDM30YLR368W SCY1P53009 804 aa6.63□□□□□ -1.35
MDM30YLR368W BCH2P36122 765 aa6.62□□□□□ -1.35
MDM30YLR368W OXP1P28273 1286 aa6.57□□□□□ -1.36
MDM30YLR368W SLX5P32828 619 aaKnown RBP6.54□□□□□ -1.36
MDM30YLR368W BUD31P25337 157 aaPredicted RBP6.54□□□□□ -1.36
MDM30YLR368W LEO1P38439 464 aa6.52□□□□□ -1.37
MDM30YLR368W TGL3P40308 642 aa6.52□□□□□ -1.37
MDM30YLR368W DMA1P38823 416 aa6.51□□□□□ -1.37
MDM30YLR368W TIF4632P39936 914 aaKnown RBP6.51□□□□□ -1.37
MDM30YLR368W EPS1P40557 701 aa6.44□□□□□ -1.38
MDM30YLR368W BDF1P35817 686 aa6.42□□□□□ -1.38
MDM30YLR368W PTP3P40048 928 aa6.41□□□□□ -1.38
MDM30YLR368W YIL055CP40523 627 aaKnown RBP6.41□□□□□ -1.38
MDM30YLR368W NAP1P25293 417 aaKnown RBP6.37□□□□□ -1.39
MDM30YLR368W IOC4Q04213 475 aa6.35□□□□□ -1.39
MDM30YLR368W RSM7P47150 247 aa6.34□□□□□ -1.39
MDM30YLR368W YAH1Q12184 172 aaKnown RBP6.31□□□□□ -1.4
MDM30YLR368W AI2P03876 854 aa6.3□□□□□ -1.4
MDM30YLR368W UBP9P39967 754 aa6.29□□□□□ -1.4
MDM30YLR368W SSP1P38871 571 aa6.29□□□□□ -1.4
MDM30YLR368W BBC1P47068 1157 aa6.29□□□□□ -1.4
MDM30YLR368W AIM44Q99299 758 aa6.28□□□□□ -1.4
MDM30YLR368W MST1P07236 462 aa6.26□□□□□ -1.41
MDM30YLR368W YRB30P53107 440 aaPredicted RBP6.26□□□□□ -1.41
MDM30YLR368W YLR271WQ06152 274 aa6.25□□□□□ -1.41
MDM30YLR368W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41 RIP-Chip
MDM30YLR368W NSR1P27476 414 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
MDM30YLR368W YOR238WQ08634 303 aa6.19□□□□□ -1.42
MDM30YLR368W SIS1P25294 352 aaKnown RBP6.18□□□□□ -1.42
MDM30YLR368W SIS2P36024 562 aa6.18□□□□□ -1.42
MDM30YLR368W PSD2P53037 1138 aaKnown RBP6.17□□□□□ -1.42
MDM30YLR368W IFH1P39520 1085 aa6.16□□□□□ -1.42
MDM30YLR368W YAP5P40574 245 aa6.15□□□□□ -1.43
MDM30YLR368W YBL029C-AQ3E756 94 aa6.13□□□□□ -1.43
MDM30YLR368W YFR016CP43597 1233 aaKnown RBP6.11□□□□□ -1.43
MDM30YLR368W MGA2P40578 1113 aa6.08□□□□□ -1.44
MDM30YLR368W VNX1P42839 908 aa6.08□□□□□ -1.44
MDM30YLR368W MRM1P25270 412 aa6.06□□□□□ -1.44
MDM30YLR368W ORC1P54784 914 aaPredicted RBP6.04□□□□□ -1.44
MDM30YLR368W CST9Q06032 482 aa6.03□□□□□ -1.44
MDM30YLR368W SNU71P53207 620 aaKnown RBP6.01□□□□□ -1.45
MDM30YLR368W WSC3Q12215 556 aa6.01□□□□□ -1.45
MDM30YLR368W TOP1P04786 769 aa6.01□□□□□ -1.45
MDM30YLR368W KRI1P42846 591 aaKnown RBP6.01□□□□□ -1.45
MDM30YLR368W SPP1Q03012 353 aa6□□□□□ -1.45
MDM30YLR368W DMA2P53924 522 aa5.99□□□□□ -1.45
MDM30YLR368W PIB1Q06651 286 aa5.99□□□□□ -1.45
MDM30YLR368W LEU3P08638 886 aa5.98□□□□□ -1.45
MDM30YLR368W GTT3P39996 337 aa5.98□□□□□ -1.45
MDM30YLR368W EBP2P36049 427 aaKnown RBP5.97□□□□□ -1.45
MDM30YLR368W VPS29P38759 282 aa5.95□□□□□ -1.46
MDM30YLR368W TIF11P38912 153 aaKnown RBP5.95□□□□□ -1.46
MDM30YLR368W RPS0BP46654 252 aaKnown RBP5.95□□□□□ -1.46
MDM30YLR368W ABP1P15891 592 aaKnown RBP5.94□□□□□ -1.46
MDM30YLR368W RTG3P38165 486 aa5.93□□□□□ -1.46
MDM30YLR368W YMR1P47147 688 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
MDM30YLR368W MNN4P36044 1178 aa5.91□□□□□ -1.46
MDM30YLR368W DBP1P24784 617 aaKnown RBP5.9□□□□□ -1.47
MDM30YLR368W AIR2Q12476 344 aaKnown RBP5.9□□□□□ -1.47
MDM30YLR368W RLF2Q12495 606 aa5.9□□□□□ -1.47
MDM30YLR368W RCR1P38212 213 aa5.89□□□□□ -1.47
MDM30YLR368W STS1P38637 319 aa5.89□□□□□ -1.47
MDM30YLR368W FKH1P40466 484 aa5.89□□□□□ -1.47
MDM30YLR368W IOC2Q12072 812 aa5.89□□□□□ -1.47
MDM30YLR368W CAB3P36076 571 aa5.88□□□□□ -1.47
MDM30YLR368W YFR006WP43590 535 aa5.88□□□□□ -1.47
MDM30YLR368W ULI1P43604 169 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms