RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	SPT7	P35177	1332 aa		5.26	□□□□□ -1.57
YSH1	YLR277C	TIF11	P38912	153 aa	Known RBP	5.25	□□□□□ -1.57
YSH1	YLR277C	SWE1	P32944	819 aa		5.25	□□□□□ -1.57
YSH1	YLR277C	SAS10	Q12136	610 aa	Predicted RBP	5.24	□□□□□ -1.57
YSH1	YLR277C	TCB2	P48231	1178 aa		5.24	□□□□□ -1.57
YSH1	YLR277C	GIN4	Q12263	1142 aa		5.24	□□□□□ -1.57
YSH1	YLR277C	ABP1	P15891	592 aa	Known RBP	5.23	□□□□□ -1.57
YSH1	YLR277C	RAM2	P29703	316 aa		5.23	□□□□□ -1.57
YSH1	YLR277C	STS1	P38637	319 aa		5.23	□□□□□ -1.57
YSH1	YLR277C	HIF1	Q12373	385 aa		5.23	□□□□□ -1.57
YSH1	YLR277C	TOA1	P32773	286 aa		5.22	□□□□□ -1.57
YSH1	YLR277C	RPN1	P38764	993 aa	Known RBP	5.21	□□□□□ -1.58
YSH1	YLR277C	SUB1	P54000	292 aa	Known RBP	5.21	□□□□□ -1.58
YSH1	YLR277C	NOP53	Q12080	455 aa	Known RBP	5.21	□□□□□ -1.58
YSH1	YLR277C	ULI1	P43604	169 aa		5.2	□□□□□ -1.58
YSH1	YLR277C	VMA1	P17255	1071 aa	Known RBP	5.2	□□□□□ -1.58
YSH1	YLR277C	YOL036W	Q08206	761 aa		5.2	□□□□□ -1.58
YSH1	YLR277C	MSB4	Q12317	492 aa		5.2	□□□□□ -1.58
YSH1	YLR277C	LEU3	P08638	886 aa		5.19	□□□□□ -1.58
YSH1	YLR277C	SSA1	P10591	642 aa	Known RBP	5.19	□□□□□ -1.58
YSH1	YLR277C	SSA2	P10592	639 aa	Known RBP	5.19	□□□□□ -1.58
YSH1	YLR277C	SET4	P42948	560 aa		5.19	□□□□□ -1.58
YSH1	YLR277C	HSP82	P02829	709 aa	Known RBP	5.18	□□□□□ -1.58
YSH1	YLR277C	GRX3	Q03835	250 aa		5.18	□□□□□ -1.58
YSH1	YLR277C	RPS0A	P32905	252 aa	Known RBP	5.18	□□□□□ -1.58
YSH1	YLR277C	EAP1	P36041	632 aa	Known RBP	5.18	□□□□□ -1.58
YSH1	YLR277C	ATG36	P46983	293 aa		5.17	□□□□□ -1.58
YSH1	YLR277C	LDB19	Q12502	818 aa		5.17	□□□□□ -1.58
YSH1	YLR277C	NHA1	Q99271	985 aa		5.17	□□□□□ -1.58
YSH1	YLR277C	FPR4	Q06205	392 aa	Predicted RBP	5.17	□□□□□ -1.58
YSH1	YLR277C	RLF2	Q12495	606 aa		5.17	□□□□□ -1.58
YSH1	YLR277C	FKH1	P40466	484 aa		5.16	□□□□□ -1.58
YSH1	YLR277C	RNA1	P11745	407 aa	Known RBP	5.15	□□□□□ -1.58
YSH1	YLR277C	TPO2	P53283	614 aa		5.15	□□□□□ -1.58
YSH1	YLR277C	PLP2	Q12017	286 aa		5.15	□□□□□ -1.58
YSH1	YLR277C	ENP1	P38333	483 aa	Known RBP	5.15	□□□□□ -1.59
YSH1	YLR277C	SAM3	Q08986	587 aa		5.15	□□□□□ -1.59
YSH1	YLR277C	IOC2	Q12072	812 aa		5.15	□□□□□ -1.59
YSH1	YLR277C	BRL1	P38770	471 aa		5.14	□□□□□ -1.59
YSH1	YLR277C	FPR3	P38911	411 aa	Known RBP	5.14	□□□□□ -1.59
YSH1	YLR277C	YGR130C	P53278	816 aa		5.14	□□□□□ -1.59
YSH1	YLR277C	TLG1	Q03322	224 aa		5.14	□□□□□ -1.59
YSH1	YLR277C	QCR6	P00127	147 aa		5.14	□□□□□ -1.59
YSH1	YLR277C	FUN12	P39730	1002 aa	Known RBP	5.14	□□□□□ -1.59
YSH1	YLR277C	YJL171C	P46992	396 aa		5.13	□□□□□ -1.59
YSH1	YLR277C	AIR2	Q12476	344 aa	Known RBP	5.13	□□□□□ -1.59
YSH1	YLR277C	ISW1	P38144	1129 aa		5.13	□□□□□ -1.59
YSH1	YLR277C	TRP5	P00931	707 aa	Known RBP	5.12	□□□□□ -1.59
YSH1	YLR277C	YNL011C	P53980	444 aa		5.11	□□□□□ -1.59
YSH1	YLR277C	GYP5	Q12344	894 aa		5.11	□□□□□ -1.59
YSH1	YLR277C	DMA2	P53924	522 aa		5.11	□□□□□ -1.59
YSH1	YLR277C	MAK11	P20484	414 aa	Known RBP	5.1	□□□□□ -1.59
YSH1	YLR277C	SPT16	P32558	1035 aa	Known RBP	5.1	□□□□□ -1.59
YSH1	YLR277C	RTG1	P32607	177 aa		5.09	□□□□□ -1.59
YSH1	YLR277C	MIF2	P35201	549 aa		5.09	□□□□□ -1.59
YSH1	YLR277C	INO80	P53115	1489 aa		5.09	□□□□□ -1.6
YSH1	YLR277C	BRN1	P38170	754 aa		5.08	□□□□□ -1.6
YSH1	YLR277C	YNL035C	P53962	389 aa	Known RBP	5.08	□□□□□ -1.6
YSH1	YLR277C	VPS72	Q03388	795 aa		5.08	□□□□□ -1.6
YSH1	YLR277C	LAM6	Q08001	693 aa		5.08	□□□□□ -1.6
YSH1	YLR277C	DAL5	P15365	543 aa		5.07	□□□□□ -1.6
YSH1	YLR277C	DCW1	P36091	449 aa		5.07	□□□□□ -1.6
YSH1	YLR277C	PIL1	P53252	339 aa	Known RBP	5.07	□□□□□ -1.6
YSH1	YLR277C	HTA1	P04911	132 aa	Known RBP	5.07	□□□□□ -1.6
YSH1	YLR277C	HTA2	P04912	132 aa		5.07	□□□□□ -1.6
YSH1	YLR277C	SPC110	P32380	944 aa		5.07	□□□□□ -1.6
YSH1	YLR277C	MPP10	P47083	593 aa	Known RBP	5.07	□□□□□ -1.6
YSH1	YLR277C	YTA7	P40340	1379 aa		5.06	□□□□□ -1.6
YSH1	YLR277C	BMT6	Q12291	365 aa		5.06	□□□□□ -1.6
YSH1	YLR277C	NMD2	P38798	1089 aa	Known RBP	5.06	□□□□□ -1.6
YSH1	YLR277C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
YSH1	YLR277C	ETT1	Q08421	412 aa	Known RBP	5.06	□□□□□ -1.6
YSH1	YLR277C	TAF13	P11747	167 aa		5.05	□□□□□ -1.6
YSH1	YLR277C	GRE2	Q12068	342 aa	Known RBP	5.05	□□□□□ -1.6
YSH1	YLR277C	NCR1	Q12200	1170 aa		5.05	□□□□□ -1.6
YSH1	YLR277C	ASF1	P32447	279 aa		5.05	□□□□□ -1.6
YSH1	YLR277C	SEC61	P32915	480 aa		5.05	□□□□□ -1.6
YSH1	YLR277C	EDS1	P38073	919 aa		5.05	□□□□□ -1.6
YSH1	YLR277C	RIX1	P38883	763 aa	Predicted RBP	5.05	□□□□□ -1.6
YSH1	YLR277C	YSH1	Q06224	779 aa	Predicted RBP	5.05	□□□□□ -1.6
YSH1	YLR277C	MCM1	P11746	286 aa		5.04	□□□□□ -1.6
YSH1	YLR277C	TFG1	P41895	735 aa	Predicted RBP	5.04	□□□□□ -1.6
YSH1	YLR277C	SEC3	P33332	1336 aa	Known RBP	5.04	□□□□□ -1.6
YSH1	YLR277C	COQ8	P27697	501 aa		5.03	□□□□□ -1.6
YSH1	YLR277C	VPS4	P52917	437 aa		5.03	□□□□□ -1.6
YSH1	YLR277C	JIP4	Q03361	876 aa		5.03	□□□□□ -1.6
YSH1	YLR277C	PTC3	P34221	468 aa	Known RBP	5.03	□□□□□ -1.6
YSH1	YLR277C	SET1	P38827	1080 aa	Known RBP	5.03	□□□□□ -1.6
YSH1	YLR277C	ATH1	P48016	1211 aa		5.03	□□□□□ -1.6
YSH1	YLR277C	DOS2	P54858	310 aa		5.03	□□□□□ -1.6
YSH1	YLR277C	SEC9	P40357	651 aa		5.02	□□□□□ -1.61
YSH1	YLR277C	YEL023C	P39992	682 aa		5.01	□□□□□ -1.61
YSH1	YLR277C	OSW7	P43611	510 aa		5.01	□□□□□ -1.61
YSH1	YLR277C	NNF2	P53253	936 aa		5.01	□□□□□ -1.61
YSH1	YLR277C	BUD21	Q08492	214 aa	Predicted RBP	5	□□□□□ -1.61
YSH1	YLR277C	GUT1	P32190	709 aa		5	□□□□□ -1.61
YSH1	YLR277C	TY1B-A	O13527	1196 aa	Known RBP	4.99	□□□□□ -1.61
YSH1	YLR277C	PTC4	P38089	393 aa		4.99	□□□□□ -1.61
YSH1	YLR277C	PEA2	P40091	420 aa		4.99	□□□□□ -1.61
YSH1	YLR277C	DAN4	P47179	1161 aa		4.99	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms