RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C NCR1Q12200 1170 aa7.94□□□□□ -1.14
UBI4YLL039C SSN2P38931 1420 aa7.93□□□□□ -1.14
UBI4YLL039C SEC61P32915 480 aa7.92□□□□□ -1.14
UBI4YLL039C DAN4P47179 1161 aa7.86□□□□□ -1.15
UBI4YLL039C GYP5Q12344 894 aa7.86□□□□□ -1.15
UBI4YLL039C XRN1P22147 1528 aaKnown RBP7.86□□□□□ -1.15
UBI4YLL039C ECM5Q03214 1411 aa7.85□□□□□ -1.15
UBI4YLL039C ABP1P15891 592 aaKnown RBP7.84□□□□□ -1.15
UBI4YLL039C JIP4Q03361 876 aa7.83□□□□□ -1.16
UBI4YLL039C THO2P53552 1597 aaKnown RBP7.81□□□□□ -1.16
UBI4YLL039C BUD4P47136 1447 aa7.81□□□□□ -1.16
UBI4YLL039C DCW1P36091 449 aa7.81□□□□□ -1.16
UBI4YLL039C HTA1P04911 132 aaKnown RBP7.8□□□□□ -1.16
UBI4YLL039C HTA2P04912 132 aa7.8□□□□□ -1.16
UBI4YLL039C TFG1P41895 735 aaPredicted RBP7.79□□□□□ -1.16
UBI4YLL039C PTC4P38089 393 aa7.76□□□□□ -1.17
UBI4YLL039C SAP30P38429 201 aa7.76□□□□□ -1.17
UBI4YLL039C YEL023CP39992 682 aa7.76□□□□□ -1.17
UBI4YLL039C YDL129WQ07555 291 aa7.75□□□□□ -1.17
UBI4YLL039C RAM2P29703 316 aa7.74□□□□□ -1.17
UBI4YLL039C MAK11P20484 414 aaKnown RBP7.72□□□□□ -1.17
UBI4YLL039C REV3P14284 1504 aa7.72□□□□□ -1.17
UBI4YLL039C GRE2Q12068 342 aaKnown RBP7.71□□□□□ -1.18
UBI4YLL039C EDS1P38073 919 aa7.7□□□□□ -1.18
UBI4YLL039C MDS3P53094 1487 aa7.69□□□□□ -1.18
UBI4YLL039C MIF2P35201 549 aa7.69□□□□□ -1.18
UBI4YLL039C CHL1P22516 861 aaPredicted RBP7.67□□□□□ -1.18
UBI4YLL039C PTC3P34221 468 aaKnown RBP7.67□□□□□ -1.18
UBI4YLL039C PEP1P32319 1579 aa7.67□□□□□ -1.18
UBI4YLL039C ATG2P53855 1592 aa7.66□□□□□ -1.18
UBI4YLL039C SIN3P22579 1536 aa7.65□□□□□ -1.18
UBI4YLL039C PRE3P38624 215 aa7.65□□□□□ -1.18
UBI4YLL039C TAF2P23255 1407 aa7.63□□□□□ -1.19
UBI4YLL039C GUT1P32190 709 aa7.63□□□□□ -1.19
UBI4YLL039C ATH1P48016 1211 aa7.63□□□□□ -1.19
UBI4YLL039C COQ8P27697 501 aa7.62□□□□□ -1.19
UBI4YLL039C BCK2P33306 851 aa7.62□□□□□ -1.19
UBI4YLL039C NST1P53935 1240 aa7.62□□□□□ -1.19
UBI4YLL039C YDR344CQ05510 147 aa7.62□□□□□ -1.19
UBI4YLL039C PML39Q03760 334 aa7.61□□□□□ -1.19
UBI4YLL039C SSK2P53599 1579 aa7.59□□□□□ -1.19
UBI4YLL039C SOL3P38858 249 aa7.58□□□□□ -1.2
UBI4YLL039C SKI3P17883 1432 aaKnown RBP7.58□□□□□ -1.2
UBI4YLL039C ESP1Q03018 1630 aa7.56□□□□□ -1.2
UBI4YLL039C MID1P41821 548 aa7.53□□□□□ -1.2
UBI4YLL039C MPH3P0CE00 602 aa7.51□□□□□ -1.21
UBI4YLL039C ELP4Q02884 456 aaKnown RBP7.51□□□□□ -1.21
UBI4YLL039C AI4P03878 556 aa7.49□□□□□ -1.21
UBI4YLL039C ILV3P39522 585 aaKnown RBP7.49□□□□□ -1.21
UBI4YLL039C ARH1P48360 493 aa7.49□□□□□ -1.21
UBI4YLL039C BPT1P14772 1559 aa7.49□□□□□ -1.21
UBI4YLL039C VRP1P37370 817 aa7.48□□□□□ -1.21
UBI4YLL039C NOP53Q12080 455 aaKnown RBP7.48□□□□□ -1.21
UBI4YLL039C MYO2P19524 1574 aaKnown RBP7.46□□□□□ -1.21
UBI4YLL039C YPK9Q12697 1472 aa7.46□□□□□ -1.22
UBI4YLL039C XDJ1P39102 459 aa7.45□□□□□ -1.22
UBI4YLL039C YGR273CP53329 174 aa7.44□□□□□ -1.22
UBI4YLL039C UFD4P33202 1483 aa7.43□□□□□ -1.22
UBI4YLL039C SCC2Q04002 1493 aa7.42□□□□□ -1.22
UBI4YLL039C PEX29Q03370 554 aa7.41□□□□□ -1.22
UBI4YLL039C RPO31P04051 1460 aa7.39□□□□□ -1.23
UBI4YLL039C SPT23P35210 1082 aa7.39□□□□□ -1.23
UBI4YLL039C HAP5Q02516 242 aa7.38□□□□□ -1.23
UBI4YLL039C MPC54Q08550 464 aa7.36□□□□□ -1.23
UBI4YLL039C YCF1P39109 1515 aaKnown RBP7.36□□□□□ -1.23
UBI4YLL039C SLI15P38283 698 aa7.34□□□□□ -1.23
UBI4YLL039C BNI4P53858 892 aa7.34□□□□□ -1.23
UBI4YLL039C TY2B-LR1P0C2J3 1770 aa7.33□□□□□ -1.24
UBI4YLL039C TY2B-FP0CX63 1770 aa7.33□□□□□ -1.24
UBI4YLL039C TY2B-GR2P0CX64 1770 aa7.33□□□□□ -1.24
UBI4YLL039C TY2B-CP25384 1770 aa7.33□□□□□ -1.24
UBI4YLL039C TY2B-DR2Q03494 1770 aa7.33□□□□□ -1.24
UBI4YLL039C TY1B-DR1Q03855 1755 aa7.33□□□□□ -1.24
UBI4YLL039C TY2B-DR3Q07791 1770 aaKnown RBP7.33□□□□□ -1.24
UBI4YLL039C TY2B-OR1Q12113 1770 aa7.33□□□□□ -1.24
UBI4YLL039C TY2B-DR1Q12472 1770 aa7.33□□□□□ -1.24
UBI4YLL039C TY2B-OR2Q12501 1770 aa7.33□□□□□ -1.24
UBI4YLL039C POL1P13382 1468 aa7.3□□□□□ -1.24
UBI4YLL039C TOP2P06786 1428 aaKnown RBP7.3□□□□□ -1.24
UBI4YLL039C NMA111P53920 997 aa7.3□□□□□ -1.24
UBI4YLL039C YML082WQ04533 649 aaKnown RBP7.3□□□□□ -1.24
UBI4YLL039C DPS1P04802 557 aaKnown RBP7.29□□□□□ -1.24
UBI4YLL039C KEX1P09620 729 aa7.28□□□□□ -1.24
UBI4YLL039C PTC2P39966 464 aaKnown RBP7.28□□□□□ -1.24
UBI4YLL039C DPL1Q05567 589 aa7.28□□□□□ -1.24
UBI4YLL039C RKR1Q04781 1562 aa7.28□□□□□ -1.24
UBI4YLL039C SET1P38827 1080 aaKnown RBP7.27□□□□□ -1.25
UBI4YLL039C CHD1P32657 1468 aa7.27□□□□□ -1.25
UBI4YLL039C CDC25P04821 1589 aa7.27□□□□□ -1.25
UBI4YLL039C TY1B-BRQ12193 1756 aa7.27□□□□□ -1.25
UBI4YLL039C TY1B-GR3Q12316 1755 aa7.27□□□□□ -1.25
UBI4YLL039C TY1B-ORQ92393 1755 aa7.27□□□□□ -1.25
UBI4YLL039C RQC2Q12532 1038 aaKnown RBP7.25□□□□□ -1.25
UBI4YLL039C STU1P38198 1513 aa7.25□□□□□ -1.25
UBI4YLL039C TY2B-BQ12491 1770 aa7.25□□□□□ -1.25
UBI4YLL039C TY1B-DR3Q99231 1755 aa7.25□□□□□ -1.25
UBI4YLL039C YLR326WQ06170 240 aaKnown RBP7.23□□□□□ -1.25
UBI4YLL039C YOR1P53049 1477 aa7.23□□□□□ -1.25
UBI4YLL039C TY1B-HO13535 1793 aa7.23□□□□□ -1.25
UBI4YLL039C TY1B-DR5P0C2I2 1755 aa7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms