RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C MAK21Q12176 1025 aaKnown RBP3.97□□□□□ -1.77
UBP11YKR098C VNX1P42839 908 aa3.96□□□□□ -1.78
UBP11YKR098C RGA2Q06407 1009 aa3.95□□□□□ -1.78
UBP11YKR098C PIB1Q06651 286 aa3.94□□□□□ -1.78
UBP11YKR098C YAP5P40574 245 aa3.93□□□□□ -1.78
UBP11YKR098C AIR2Q12476 344 aaKnown RBP3.93□□□□□ -1.78
UBP11YKR098C VMA1P17255 1071 aaKnown RBP3.93□□□□□ -1.78
UBP11YKR098C UBP14P38237 781 aaKnown RBP3.93□□□□□ -1.78
UBP11YKR098C GUA1P38625 525 aaKnown RBP3.93□□□□□ -1.78
UBP11YKR098C SPP1Q03012 353 aa3.92□□□□□ -1.78
UBP11YKR098C YDR090CQ03193 310 aa3.92□□□□□ -1.78
UBP11YKR098C VHR2P40041 505 aa3.92□□□□□ -1.78
UBP11YKR098C YJL171CP46992 396 aa3.92□□□□□ -1.78
UBP11YKR098C ATF2P53296 535 aa3.92□□□□□ -1.78
UBP11YKR098C ATH1P48016 1211 aa3.9□□□□□ -1.78
UBP11YKR098C HGH1P48362 394 aaKnown RBP3.9□□□□□ -1.78
UBP11YKR098C GUT1P32190 709 aa3.9□□□□□ -1.79
UBP11YKR098C YLR326WQ06170 240 aaKnown RBP3.9□□□□□ -1.79
UBP11YKR098C GRE2Q12068 342 aaKnown RBP3.9□□□□□ -1.79
UBP11YKR098C YGR273CP53329 174 aa3.88□□□□□ -1.79
UBP11YKR098C HPC2Q01448 625 aa3.88□□□□□ -1.79
UBP11YKR098C SAM3Q08986 587 aa3.88□□□□□ -1.79
UBP11YKR098C FKH1P40466 484 aa3.87□□□□□ -1.79
UBP11YKR098C SOL3P38858 249 aa3.87□□□□□ -1.79
UBP11YKR098C WSC3Q12215 556 aa3.87□□□□□ -1.79
UBP11YKR098C KEX1P09620 729 aa3.86□□□□□ -1.79
UBP11YKR098C PCS60P38137 543 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
UBP11YKR098C KIC1P38692 1080 aa3.86□□□□□ -1.79
UBP11YKR098C PSE1P32337 1089 aaKnown RBP3.85□□□□□ -1.79
UBP11YKR098C RAD54P32863 898 aa3.85□□□□□ -1.79
UBP11YKR098C TFB3Q03290 321 aa3.85□□□□□ -1.79
UBP11YKR098C GYP5Q12344 894 aa3.85□□□□□ -1.79
UBP11YKR098C NST1P53935 1240 aa3.84□□□□□ -1.79
UBP11YKR098C PKC1P24583 1151 aa3.82□□□□□ -1.8
UBP11YKR098C ORC6P38826 435 aa3.82□□□□□ -1.8
UBP11YKR098C CSN12P47130 423 aa3.82□□□□□ -1.8
UBP11YKR098C SSA2P10592 639 aaKnown RBP3.82□□□□□ -1.8
UBP11YKR098C BRL1P38770 471 aa3.82□□□□□ -1.8
UBP11YKR098C TIF11P38912 153 aaKnown RBP3.82□□□□□ -1.8
UBP11YKR098C DCW1P36091 449 aa3.81□□□□□ -1.8
UBP11YKR098C GTT3P39996 337 aa3.8□□□□□ -1.8
UBP11YKR098C TEA1P47988 759 aa3.8□□□□□ -1.8
UBP11YKR098C YOL036WQ08206 761 aa3.8□□□□□ -1.8
UBP11YKR098C KTR1P27810 393 aaKnown RBP3.8□□□□□ -1.8
UBP11YKR098C BMT6Q12291 365 aa3.8□□□□□ -1.8
UBP11YKR098C AI4P03878 556 aa3.79□□□□□ -1.8
UBP11YKR098C RGR1P19263 1082 aa3.79□□□□□ -1.8
UBP11YKR098C LDB19Q12502 818 aa3.79□□□□□ -1.8
UBP11YKR098C HTA1P04911 132 aaKnown RBP3.79□□□□□ -1.8
UBP11YKR098C HTA2P04912 132 aa3.79□□□□□ -1.8
UBP11YKR098C MPH3P0CE00 602 aa3.79□□□□□ -1.8
UBP11YKR098C ILV3P39522 585 aaKnown RBP3.79□□□□□ -1.8
UBP11YKR098C SET4P42948 560 aa3.79□□□□□ -1.8
UBP11YKR098C MVP1P40959 511 aaKnown RBP3.78□□□□□ -1.8
UBP11YKR098C GAP1P19145 602 aaPredicted RBP3.78□□□□□ -1.81
UBP11YKR098C GLN1P32288 370 aaKnown RBP3.78□□□□□ -1.81
UBP11YKR098C BIM1P40013 344 aa3.78□□□□□ -1.81
UBP11YKR098C YJL007CP47080 104 aa3.77□□□□□ -1.81
UBP11YKR098C TYW1Q08960 810 aaKnown RBP3.77□□□□□ -1.81
UBP11YKR098C CLB5P30283 435 aa3.76□□□□□ -1.81
UBP11YKR098C SLI15P38283 698 aa3.76□□□□□ -1.81
UBP11YKR098C NIS1P53939 407 aa3.76□□□□□ -1.81
UBP11YKR098C ATG32P40458 529 aa3.76□□□□□ -1.81
UBP11YKR098C MSB4Q12317 492 aa3.76□□□□□ -1.81
UBP11YKR098C YEL023CP39992 682 aa3.75□□□□□ -1.81
UBP11YKR098C DAN4P47179 1161 aa3.75□□□□□ -1.81
UBP11YKR098C FPK1P53739 893 aa3.75□□□□□ -1.81
UBP11YKR098C SUB2Q07478 446 aaKnown RBP3.75□□□□□ -1.81
UBP11YKR098C HST2P53686 357 aa3.74□□□□□ -1.81
UBP11YKR098C CSC1Q06538 782 aa3.74□□□□□ -1.81
UBP11YKR098C TIF1P10081 395 aaKnown RBP3.73□□□□□ -1.81
UBP11YKR098C IOC2Q12072 812 aa3.73□□□□□ -1.81
UBP11YKR098C SSA1P10591 642 aaKnown RBP3.73□□□□□ -1.81
UBP11YKR098C ULI1P43604 169 aa3.73□□□□□ -1.81
UBP11YKR098C YPR109WQ06104 294 aa3.73□□□□□ -1.81
UBP11YKR098C RPP1BP10622 106 aaKnown RBP3.72□□□□□ -1.81
UBP11YKR098C PTC4P38089 393 aa3.72□□□□□ -1.81
UBP11YKR098C YBL036CP38197 257 aa3.72□□□□□ -1.81
UBP11YKR098C YMR196WQ04336 1088 aa3.72□□□□□ -1.81
UBP11YKR098C CDC73Q06697 393 aa3.72□□□□□ -1.81
UBP11YKR098C ERG12P07277 443 aa3.72□□□□□ -1.81
UBP11YKR098C BIO2P32451 375 aa3.72□□□□□ -1.81
UBP11YKR098C MMP1Q12372 583 aa3.72□□□□□ -1.81
UBP11YKR098C SIT4P20604 311 aa3.71□□□□□ -1.82
UBP11YKR098C ESS1P22696 170 aa3.71□□□□□ -1.82
UBP11YKR098C SCJ1P25303 377 aa3.71□□□□□ -1.82
UBP11YKR098C GEF1P37020 779 aa3.71□□□□□ -1.82
UBP11YKR098C TFB4Q12004 338 aa3.71□□□□□ -1.82
UBP11YKR098C RAD59Q12223 238 aa3.71□□□□□ -1.82
UBP11YKR098C EAP1P36041 632 aaKnown RBP3.7□□□□□ -1.82
UBP11YKR098C RPL34BP40525 121 aaKnown RBP3.7□□□□□ -1.82
UBP11YKR098C PKH3Q03306 898 aaPredicted RBP3.7□□□□□ -1.82
UBP11YKR098C TRP5P00931 707 aaKnown RBP3.7□□□□□ -1.82
UBP11YKR098C SSA4P22202 642 aaKnown RBP3.7□□□□□ -1.82
UBP11YKR098C CSE4P36012 229 aa3.7□□□□□ -1.82
UBP11YKR098C YJU3P28321 313 aa3.69□□□□□ -1.82
UBP11YKR098C TUM1Q08686 304 aaKnown RBP3.69□□□□□ -1.82
UBP11YKR098C RTG2P32608 588 aaKnown RBP3.69□□□□□ -1.82
UBP11YKR098C YNL108CP53929 270 aa3.69□□□□□ -1.82
UBP11YKR098C JIP4Q03361 876 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms