RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	DAL5	P15365	543 aa		5.07	□□□□□ -1.6
NUP133	YKR082W	TY4A-J	P47023	414 aa		5.07	□□□□□ -1.6
NUP133	YKR082W	TAF13	P11747	167 aa		5.06	□□□□□ -1.6
NUP133	YKR082W	RPT2	P40327	437 aa	Known RBP	5.06	□□□□□ -1.6
NUP133	YKR082W	YAF9	P53930	226 aa		5.05	□□□□□ -1.6
NUP133	YKR082W	MAM3	Q12296	706 aa		5.05	□□□□□ -1.6
NUP133	YKR082W	HSP82	P02829	709 aa	Known RBP	5.04	□□□□□ -1.6
NUP133	YKR082W	MON2	P48563	1636 aa	Predicted RBP	5.04	□□□□□ -1.6
NUP133	YKR082W	TLG1	Q03322	224 aa		5.04	□□□□□ -1.6
NUP133	YKR082W	UBX5	Q06682	500 aa		5.03	□□□□□ -1.6
NUP133	YKR082W	SWR1	Q05471	1514 aa		5.03	□□□□□ -1.6
NUP133	YKR082W	GIR2	Q03768	265 aa	Predicted RBP	5.03	□□□□□ -1.6
NUP133	YKR082W	SPT16	P32558	1035 aa	Known RBP	5.03	□□□□□ -1.6
NUP133	YKR082W	MET10	P39692	1035 aa		5.03	□□□□□ -1.6
NUP133	YKR082W	GRX3	Q03835	250 aa		5.02	□□□□□ -1.61
NUP133	YKR082W	FPR4	Q06205	392 aa	Predicted RBP	5.02	□□□□□ -1.61
NUP133	YKR082W	REV3	P14284	1504 aa		5.01	□□□□□ -1.61
NUP133	YKR082W	NMD2	P38798	1089 aa	Known RBP	5.01	□□□□□ -1.61
NUP133	YKR082W	BOI2	P39969	1040 aa		5	□□□□□ -1.61
NUP133	YKR082W	SUB2	Q07478	446 aa	Known RBP	5	□□□□□ -1.61
NUP133	YKR082W	GAL11	P19659	1081 aa		5	□□□□□ -1.61
NUP133	YKR082W	VMA4	P22203	233 aa	Known RBP	5	□□□□□ -1.61
NUP133	YKR082W	HGH1	P48362	394 aa	Known RBP	5	□□□□□ -1.61
NUP133	YKR082W	SEC20	P28791	383 aa		4.99	□□□□□ -1.61
NUP133	YKR082W	TOM20	P35180	183 aa		4.99	□□□□□ -1.61
NUP133	YKR082W	TIF4632	P39936	914 aa	Known RBP	4.99	□□□□□ -1.61
NUP133	YKR082W	POL5	P39985	1022 aa	Known RBP	4.99	□□□□□ -1.61
NUP133	YKR082W	MFT1	P33441	392 aa	Known RBP	4.99	□□□□□ -1.61
NUP133	YKR082W	FUN12	P39730	1002 aa	Known RBP	4.98	□□□□□ -1.61
NUP133	YKR082W	PMC1	P38929	1173 aa	Predicted RBP	4.98	□□□□□ -1.61
NUP133	YKR082W	THO2	P53552	1597 aa	Known RBP	4.98	□□□□□ -1.61
NUP133	YKR082W	SKI3	P17883	1432 aa	Known RBP	4.98	□□□□□ -1.61
NUP133	YKR082W	FAF1	P40546	346 aa	Predicted RBP	4.98	□□□□□ -1.61
NUP133	YKR082W	PLP2	Q12017	286 aa		4.98	□□□□□ -1.61
NUP133	YKR082W	KEX1	P09620	729 aa		4.97	□□□□□ -1.61
NUP133	YKR082W	CEF1	Q03654	590 aa	Predicted RBP	4.97	□□□□□ -1.61
NUP133	YKR082W	TAF2	P23255	1407 aa		4.97	□□□□□ -1.61
NUP133	YKR082W	KIN1	P13185	1064 aa		4.97	□□□□□ -1.61
NUP133	YKR082W	RRN6	P32786	894 aa		4.97	□□□□□ -1.61
NUP133	YKR082W	SLD2	P34252	453 aa		4.97	□□□□□ -1.61
NUP133	YKR082W	SEN54	Q02825	467 aa	Predicted RBP	4.97	□□□□□ -1.61
NUP133	YKR082W	RSE1	Q04693	1361 aa	Known RBP	4.97	□□□□□ -1.61
NUP133	YKR082W	SIN3	P22579	1536 aa		4.97	□□□□□ -1.61
NUP133	YKR082W	SSK2	P53599	1579 aa		4.97	□□□□□ -1.61
NUP133	YKR082W	YMR196W	Q04336	1088 aa		4.96	□□□□□ -1.61
NUP133	YKR082W	HEM3	P28789	327 aa		4.96	□□□□□ -1.62
NUP133	YKR082W	PKH1	Q03407	766 aa		4.96	□□□□□ -1.62
NUP133	YKR082W	YPR148C	Q06523	435 aa		4.96	□□□□□ -1.62
NUP133	YKR082W	HSC82	P15108	705 aa	Known RBP	4.95	□□□□□ -1.62
NUP133	YKR082W	AIM21	P40563	679 aa		4.95	□□□□□ -1.62
NUP133	YKR082W	YDL121C	Q07541	149 aa		4.95	□□□□□ -1.62
NUP133	YKR082W	NFU1	P32860	256 aa		4.95	□□□□□ -1.62
NUP133	YKR082W	TPM2	P40414	161 aa		4.95	□□□□□ -1.62
NUP133	YKR082W	PSK2	Q08217	1101 aa		4.95	□□□□□ -1.62
NUP133	YKR082W	SSA4	P22202	642 aa	Known RBP	4.95	□□□□□ -1.62
NUP133	YKR082W	VPS27	P40343	622 aa	Known RBP	4.95	□□□□□ -1.62
NUP133	YKR082W	TMA64	Q04600	565 aa	Known RBP	4.95	□□□□□ -1.62
NUP133	YKR082W	PWP2	P25635	923 aa	Known RBP	4.94	□□□□□ -1.62
NUP133	YKR082W	MPE1	P35728	441 aa	Known RBP	4.94	□□□□□ -1.62
NUP133	YKR082W	YLR257W	Q06146	321 aa	Known RBP	4.94	□□□□□ -1.62
NUP133	YKR082W	MMS22	Q06164	1454 aa		4.94	□□□□□ -1.62
NUP133	YKR082W	ENP1	P38333	483 aa	Known RBP	4.93	□□□□□ -1.62
NUP133	YKR082W	ESF2	P53743	316 aa	Known RBP	4.93	□□□□□ -1.62
NUP133	YKR082W	NMD3	P38861	518 aa	Known RBP	4.93	□□□□□ -1.62
NUP133	YKR082W	YNR021W	P53723	404 aa	Known RBP	4.93	□□□□□ -1.62
NUP133	YKR082W	ALD4	P46367	519 aa	Known RBP	4.92	□□□□□ -1.62
NUP133	YKR082W	MEH1	Q02205	184 aa		4.92	□□□□□ -1.62
NUP133	YKR082W	AIM7	Q12156	149 aa		4.92	□□□□□ -1.62
NUP133	YKR082W	ESP1	Q03018	1630 aa		4.92	□□□□□ -1.62
NUP133	YKR082W	CHD1	P32657	1468 aa		4.92	□□□□□ -1.62
NUP133	YKR082W	RIM101	P33400	625 aa		4.92	□□□□□ -1.62
NUP133	YKR082W	DSF2	P38213	736 aa		4.92	□□□□□ -1.62
NUP133	YKR082W	RPA135	P22138	1203 aa	Known RBP	4.91	□□□□□ -1.62
NUP133	YKR082W	SPB4	P25808	606 aa	Predicted RBP	4.91	□□□□□ -1.62
NUP133	YKR082W	NOC2	P39744	710 aa	Known RBP	4.91	□□□□□ -1.62
NUP133	YKR082W	DJP1	P40564	432 aa		4.9	□□□□□ -1.62
NUP133	YKR082W	GDE1	Q02979	1223 aa		4.9	□□□□□ -1.62
NUP133	YKR082W	IMH1	Q06704	911 aa	Known RBP	4.9	□□□□□ -1.62
NUP133	YKR082W	CST6	P40535	587 aa		4.9	□□□□□ -1.63
NUP133	YKR082W	NOP53	Q12080	455 aa	Known RBP	4.9	□□□□□ -1.63
NUP133	YKR082W	NKP1	Q12493	238 aa		4.9	□□□□□ -1.63
NUP133	YKR082W	ERP2	P39704	215 aa		4.89	□□□□□ -1.63
NUP133	YKR082W	SYH1	Q02875	849 aa	Known RBP	4.89	□□□□□ -1.63
NUP133	YKR082W	RCF1	Q03713	159 aa		4.89	□□□□□ -1.63
NUP133	YKR082W	SEC9	P40357	651 aa		4.89	□□□□□ -1.63
NUP133	YKR082W	SEC27	P41811	889 aa	Known RBP	4.89	□□□□□ -1.63
NUP133	YKR082W	SVL3	Q03088	825 aa	Known RBP	4.89	□□□□□ -1.63
NUP133	YKR082W	NNF1	P47149	201 aa		4.89	□□□□□ -1.63
NUP133	YKR082W	HPC2	Q01448	625 aa		4.89	□□□□□ -1.63
NUP133	YKR082W	YSH1	Q06224	779 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP133	YKR082W	MAK16	P10962	306 aa	Predicted RBP	4.88	□□□□□ -1.63
NUP133	YKR082W	MYO2	P19524	1574 aa	Known RBP	4.88	□□□□□ -1.63
NUP133	YKR082W	PPX1	P38698	397 aa		4.88	□□□□□ -1.63
NUP133	YKR082W	IES1	P43579	692 aa		4.88	□□□□□ -1.63
NUP133	YKR082W	TAF1	P46677	1066 aa		4.88	□□□□□ -1.63
NUP133	YKR082W	CDC11	P32458	415 aa		4.87	□□□□□ -1.63
NUP133	YKR082W	STM1	P39015	273 aa	Known RBP	4.87	□□□□□ -1.63
NUP133	YKR082W	HOS2	P53096	452 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP133	YKR082W	SVF1	Q05515	481 aa		4.87	□□□□□ -1.63
NUP133	YKR082W	COG4	Q06096	861 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms