RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A YNL035CP53962 389 aaKnown RBP7.95□□□□□ -1.14
SFT1YKL006C-A YJL171CP46992 396 aa7.94□□□□□ -1.14
SFT1YKL006C-A YEL023CP39992 682 aa7.93□□□□□ -1.14
SFT1YKL006C-A FKH1P40466 484 aa7.92□□□□□ -1.14
SFT1YKL006C-A JIP4Q03361 876 aa7.92□□□□□ -1.14
SFT1YKL006C-A NCR1Q12200 1170 aa7.92□□□□□ -1.14
SFT1YKL006C-A PTC4P38089 393 aa7.91□□□□□ -1.14
SFT1YKL006C-A TFG1P41895 735 aaPredicted RBP7.91□□□□□ -1.14
SFT1YKL006C-A AIR2Q12476 344 aaKnown RBP7.91□□□□□ -1.14
SFT1YKL006C-A RQC2Q12532 1038 aaKnown RBP7.91□□□□□ -1.14
SFT1YKL006C-A SEC61P32915 480 aa7.89□□□□□ -1.15
SFT1YKL006C-A IFH1P39520 1085 aa7.85□□□□□ -1.15
SFT1YKL006C-A DAN4P47179 1161 aa7.85□□□□□ -1.15
SFT1YKL006C-A SOL3P38858 249 aa7.83□□□□□ -1.16
SFT1YKL006C-A BMT6Q12291 365 aa7.83□□□□□ -1.16
SFT1YKL006C-A YGR273CP53329 174 aa7.81□□□□□ -1.16
SFT1YKL006C-A VPS70P47161 811 aa7.79□□□□□ -1.16
SFT1YKL006C-A PML39Q03760 334 aa7.78□□□□□ -1.16
SFT1YKL006C-A MPH3P0CE00 602 aa7.77□□□□□ -1.17
SFT1YKL006C-A SAP30P38429 201 aa7.77□□□□□ -1.17
SFT1YKL006C-A NST1P53935 1240 aa7.77□□□□□ -1.17
SFT1YKL006C-A YDL129WQ07555 291 aa7.77□□□□□ -1.17
SFT1YKL006C-A AI4P03878 556 aa7.76□□□□□ -1.17
SFT1YKL006C-A YPR148CQ06523 435 aa7.74□□□□□ -1.17
SFT1YKL006C-A VHR2P40041 505 aa7.73□□□□□ -1.17
SFT1YKL006C-A MID1P41821 548 aa7.71□□□□□ -1.18
SFT1YKL006C-A KEX1P09620 729 aa7.69□□□□□ -1.18
SFT1YKL006C-A ILV3P39522 585 aaKnown RBP7.69□□□□□ -1.18
SFT1YKL006C-A REF2P42073 533 aaPredicted RBP7.69□□□□□ -1.18
SFT1YKL006C-A PEX29Q03370 554 aa7.69□□□□□ -1.18
SFT1YKL006C-A UBP14P38237 781 aaKnown RBP7.68□□□□□ -1.18
SFT1YKL006C-A YLR326WQ06170 240 aaKnown RBP7.67□□□□□ -1.18
SFT1YKL006C-A KIC1P38692 1080 aa7.65□□□□□ -1.18
SFT1YKL006C-A CKB1P43639 278 aa7.65□□□□□ -1.18
SFT1YKL006C-A RAD54P32863 898 aa7.64□□□□□ -1.19
SFT1YKL006C-A SLI15P38283 698 aa7.64□□□□□ -1.19
SFT1YKL006C-A SAS10Q12136 610 aaPredicted RBP7.64□□□□□ -1.19
SFT1YKL006C-A ELP4Q02884 456 aaKnown RBP7.62□□□□□ -1.19
SFT1YKL006C-A PCS60P38137 543 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
SFT1YKL006C-A CHL1P22516 861 aaPredicted RBP7.59□□□□□ -1.19
SFT1YKL006C-A PRE3P38624 215 aa7.59□□□□□ -1.19
SFT1YKL006C-A YDR090CQ03193 310 aa7.58□□□□□ -1.2
SFT1YKL006C-A MPC54Q08550 464 aa7.58□□□□□ -1.2
SFT1YKL006C-A PBS2P08018 668 aa7.57□□□□□ -1.2
SFT1YKL006C-A SPB4P25808 606 aaPredicted RBP7.57□□□□□ -1.2
SFT1YKL006C-A ARH1P48360 493 aa7.57□□□□□ -1.2
SFT1YKL006C-A DPL1Q05567 589 aa7.57□□□□□ -1.2
SFT1YKL006C-A COX6P00427 148 aa7.56□□□□□ -1.2
SFT1YKL006C-A RPP1BP10622 106 aaKnown RBP7.56□□□□□ -1.2
SFT1YKL006C-A YDR344CQ05510 147 aa7.56□□□□□ -1.2
SFT1YKL006C-A MAK21Q12176 1025 aaKnown RBP7.56□□□□□ -1.2
SFT1YKL006C-A NMA111P53920 997 aa7.55□□□□□ -1.2
SFT1YKL006C-A HAP5Q02516 242 aa7.54□□□□□ -1.2
SFT1YKL006C-A CDC73Q06697 393 aa7.54□□□□□ -1.2
SFT1YKL006C-A SPT23P35210 1082 aa7.5□□□□□ -1.21
SFT1YKL006C-A ISU2Q12056 156 aa7.5□□□□□ -1.21
SFT1YKL006C-A PEX21P50091 288 aa7.48□□□□□ -1.21
SFT1YKL006C-A MAM3Q12296 706 aa7.48□□□□□ -1.21
SFT1YKL006C-A DSF2P38213 736 aa7.45□□□□□ -1.22
SFT1YKL006C-A PTC2P39966 464 aaKnown RBP7.45□□□□□ -1.22
SFT1YKL006C-A BNI4P53858 892 aa7.45□□□□□ -1.22
SFT1YKL006C-A BCK2P33306 851 aa7.44□□□□□ -1.22
SFT1YKL006C-A VRP1P37370 817 aa7.44□□□□□ -1.22
SFT1YKL006C-A CSC1Q06538 782 aa7.43□□□□□ -1.22
SFT1YKL006C-A IES2P40154 320 aa7.41□□□□□ -1.22
SFT1YKL006C-A ORC6P38826 435 aa7.4□□□□□ -1.22
SFT1YKL006C-A TUM1Q08686 304 aaKnown RBP7.39□□□□□ -1.23
SFT1YKL006C-A TFB4Q12004 338 aa7.39□□□□□ -1.23
SFT1YKL006C-A YRR1Q12172 810 aa7.39□□□□□ -1.23
SFT1YKL006C-A YML082WQ04533 649 aaKnown RBP7.38□□□□□ -1.23
SFT1YKL006C-A PDR1P12383 1068 aa7.37□□□□□ -1.23
SFT1YKL006C-A GAP1P19145 602 aaPredicted RBP7.37□□□□□ -1.23
SFT1YKL006C-A MVP1P40959 511 aaKnown RBP7.37□□□□□ -1.23
SFT1YKL006C-A RGR1P19263 1082 aa7.35□□□□□ -1.23
SFT1YKL006C-A YPR109WQ06104 294 aa7.35□□□□□ -1.23
SFT1YKL006C-A PSE1P32337 1089 aaKnown RBP7.34□□□□□ -1.23
SFT1YKL006C-A DIT2P21595 489 aa7.33□□□□□ -1.24
SFT1YKL006C-A NUP42P49686 430 aaKnown RBP7.33□□□□□ -1.24
SFT1YKL006C-A NPL4P33755 580 aa7.31□□□□□ -1.24
SFT1YKL006C-A XDJ1P39102 459 aa7.31□□□□□ -1.24
SFT1YKL006C-A RAM1P22007 431 aa7.3□□□□□ -1.24
SFT1YKL006C-A GYP1Q08484 637 aa7.29□□□□□ -1.24
SFT1YKL006C-A YPR015CQ12531 247 aa7.29□□□□□ -1.24
SFT1YKL006C-A NUD1P32336 851 aa7.28□□□□□ -1.24
SFT1YKL006C-A ATF2P53296 535 aa7.26□□□□□ -1.25
SFT1YKL006C-A CLB5P30283 435 aa7.25□□□□□ -1.25
SFT1YKL006C-A TEA1P47988 759 aa7.25□□□□□ -1.25
SFT1YKL006C-A GCD11P32481 527 aaKnown RBP7.24□□□□□ -1.25
SFT1YKL006C-A ISM1P48526 1002 aa7.24□□□□□ -1.25
SFT1YKL006C-A BUD20Q08004 166 aaPredicted RBP7.23□□□□□ -1.25
SFT1YKL006C-A STR2P47164 639 aa7.22□□□□□ -1.25
SFT1YKL006C-A YNR021WP53723 404 aaKnown RBP7.22□□□□□ -1.25
SFT1YKL006C-A PRT1P06103 763 aaKnown RBP7.21□□□□□ -1.26
SFT1YKL006C-A GLC3P32775 704 aa7.2□□□□□ -1.26
SFT1YKL006C-A SAS4Q04003 481 aa7.2□□□□□ -1.26
SFT1YKL006C-A LEU3P08638 886 aa7.18□□□□□ -1.26
SFT1YKL006C-A KEX2P13134 814 aa7.17□□□□□ -1.26
SFT1YKL006C-A YMR196WQ04336 1088 aa7.15□□□□□ -1.26
SFT1YKL006C-A DPS1P04802 557 aaKnown RBP7.14□□□□□ -1.27
SFT1YKL006C-A MRF1P30775 413 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms