RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W PRE3P38624 215 aa3.57□□□□□ -1.84
RTT107YHR154W DBP1P24784 617 aaKnown RBP3.57□□□□□ -1.84
RTT107YHR154W YFR006WP43590 535 aa3.57□□□□□ -1.84
RTT107YHR154W PEP1P32319 1579 aa3.56□□□□□ -1.84
RTT107YHR154W SGS1P35187 1447 aa3.55□□□□□ -1.84
RTT107YHR154W VMA1P17255 1071 aaKnown RBP3.55□□□□□ -1.84
RTT107YHR154W VRP1P37370 817 aa3.55□□□□□ -1.84
RTT107YHR154W JIP4Q03361 876 aa3.55□□□□□ -1.84
RTT107YHR154W HIR3P47171 1648 aa3.54□□□□□ -1.84
RTT107YHR154W YMR1P47147 688 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
RTT107YHR154W BPT1P14772 1559 aa3.54□□□□□ -1.84
RTT107YHR154W XDJ1P39102 459 aa3.53□□□□□ -1.84
RTT107YHR154W PSD2P53037 1138 aaKnown RBP3.53□□□□□ -1.84
RTT107YHR154W DPS1P04802 557 aaKnown RBP3.53□□□□□ -1.84
RTT107YHR154W YLR271WQ06152 274 aa3.53□□□□□ -1.84
RTT107YHR154W RGA2Q06407 1009 aa3.53□□□□□ -1.84
RTT107YHR154W DAN4P47179 1161 aa3.52□□□□□ -1.85
RTT107YHR154W SAM3Q08986 587 aa3.51□□□□□ -1.85
RTT107YHR154W ELP4Q02884 456 aaKnown RBP3.5□□□□□ -1.85
RTT107YHR154W GYP5Q12344 894 aa3.5□□□□□ -1.85
RTT107YHR154W HTA1P04911 132 aaKnown RBP3.49□□□□□ -1.85
RTT107YHR154W HTA2P04912 132 aa3.49□□□□□ -1.85
RTT107YHR154W DCW1P36091 449 aa3.49□□□□□ -1.85
RTT107YHR154W ABP1P15891 592 aaKnown RBP3.49□□□□□ -1.85
RTT107YHR154W STS1P38637 319 aa3.48□□□□□ -1.85
RTT107YHR154W VPS29P38759 282 aa3.48□□□□□ -1.85
RTT107YHR154W YCF1P39109 1515 aaKnown RBP3.48□□□□□ -1.85
RTT107YHR154W YEL023CP39992 682 aa3.48□□□□□ -1.85
RTT107YHR154W ATG2P53855 1592 aa3.47□□□□□ -1.85
RTT107YHR154W PTC4P38089 393 aa3.47□□□□□ -1.85
RTT107YHR154W RTG3P38165 486 aa3.46□□□□□ -1.86
RTT107YHR154W SSK2P53599 1579 aa3.46□□□□□ -1.86
RTT107YHR154W MYO2P19524 1574 aaKnown RBP3.46□□□□□ -1.86
RTT107YHR154W RGA1P39083 1007 aa3.45□□□□□ -1.86
RTT107YHR154W LTE1P07866 1435 aa3.44□□□□□ -1.86
RTT107YHR154W YDR344CQ05510 147 aa3.44□□□□□ -1.86
RTT107YHR154W PML39Q03760 334 aa3.43□□□□□ -1.86
RTT107YHR154W MET5P47169 1442 aa3.43□□□□□ -1.86
RTT107YHR154W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
RTT107YHR154W DMA2P53924 522 aa3.42□□□□□ -1.86
RTT107YHR154W XRN1P22147 1528 aaKnown RBP3.41□□□□□ -1.86
RTT107YHR154W BNI1P41832 1953 aa3.4□□□□□ -1.86
RTT107YHR154W RPA190P10964 1664 aaKnown RBP3.4□□□□□ -1.87
RTT107YHR154W CDC25P04821 1589 aa3.4□□□□□ -1.87
RTT107YHR154W DNF1P32660 1571 aa3.4□□□□□ -1.87
RTT107YHR154W SSP1P38871 571 aa3.39□□□□□ -1.87
RTT107YHR154W TAF2P23255 1407 aa3.39□□□□□ -1.87
RTT107YHR154W SRC1Q03707 834 aa3.38□□□□□ -1.87
RTT107YHR154W CST9Q06032 482 aa3.38□□□□□ -1.87
RTT107YHR154W ESC1Q03661 1658 aaKnown RBP3.38□□□□□ -1.87
RTT107YHR154W LEU3P08638 886 aa3.38□□□□□ -1.87
RTT107YHR154W PEX29Q03370 554 aa3.38□□□□□ -1.87
RTT107YHR154W RCR1P38212 213 aa3.36□□□□□ -1.87
RTT107YHR154W IRC20Q06554 1556 aa3.36□□□□□ -1.87
RTT107YHR154W ARH1P48360 493 aa3.36□□□□□ -1.87
RTT107YHR154W GEA2P39993 1459 aaKnown RBP3.36□□□□□ -1.87
RTT107YHR154W SIN3P22579 1536 aa3.35□□□□□ -1.87
RTT107YHR154W SPT23P35210 1082 aa3.35□□□□□ -1.87
RTT107YHR154W GRE2Q12068 342 aaKnown RBP3.35□□□□□ -1.87
RTT107YHR154W RKR1Q04781 1562 aa3.34□□□□□ -1.87
RTT107YHR154W MID1P41821 548 aa3.34□□□□□ -1.87
RTT107YHR154W RPO31P04051 1460 aa3.33□□□□□ -1.88
RTT107YHR154W MGA2P40578 1113 aa3.32□□□□□ -1.88
RTT107YHR154W SKI3P17883 1432 aaKnown RBP3.32□□□□□ -1.88
RTT107YHR154W MMS1Q06211 1407 aa3.31□□□□□ -1.88
RTT107YHR154W ATH1P48016 1211 aa3.31□□□□□ -1.88
RTT107YHR154W ESP1Q03018 1630 aa3.31□□□□□ -1.88
RTT107YHR154W RPN1P38764 993 aaKnown RBP3.31□□□□□ -1.88
RTT107YHR154W SPB4P25808 606 aaPredicted RBP3.31□□□□□ -1.88
RTT107YHR154W CHD1P32657 1468 aa3.3□□□□□ -1.88
RTT107YHR154W UFD4P33202 1483 aa3.3□□□□□ -1.88
RTT107YHR154W PTC2P39966 464 aaKnown RBP3.3□□□□□ -1.88
RTT107YHR154W ITT1Q04638 464 aa3.3□□□□□ -1.88
RTT107YHR154W HAP5Q02516 242 aa3.3□□□□□ -1.88
RTT107YHR154W RLF2Q12495 606 aa3.29□□□□□ -1.88
RTT107YHR154W TY1B-BRQ12193 1756 aa3.29□□□□□ -1.88
RTT107YHR154W TY1B-GR3Q12316 1755 aa3.29□□□□□ -1.88
RTT107YHR154W TY1B-ORQ92393 1755 aa3.29□□□□□ -1.88
RTT107YHR154W RAS1P01119 309 aa3.27□□□□□ -1.89
RTT107YHR154W PAN1P32521 1480 aa3.27□□□□□ -1.89
RTT107YHR154W BNI4P53858 892 aa3.27□□□□□ -1.89
RTT107YHR154W DNF2Q12675 1612 aa3.27□□□□□ -1.89
RTT107YHR154W GUT1P32190 709 aa3.27□□□□□ -1.89
RTT107YHR154W SAS10Q12136 610 aaPredicted RBP3.27□□□□□ -1.89
RTT107YHR154W SCC2Q04002 1493 aa3.26□□□□□ -1.89
RTT107YHR154W AIM44Q99299 758 aa3.26□□□□□ -1.89
RTT107YHR154W DRS2P39524 1355 aa3.26□□□□□ -1.89
RTT107YHR154W TRK1P12685 1235 aa3.26□□□□□ -1.89
RTT107YHR154W YPK9Q12697 1472 aa3.25□□□□□ -1.89
RTT107YHR154W TY2B-LR1P0C2J3 1770 aa3.25□□□□□ -1.89
RTT107YHR154W TY2B-FP0CX63 1770 aa3.25□□□□□ -1.89
RTT107YHR154W TY2B-GR2P0CX64 1770 aa3.25□□□□□ -1.89
RTT107YHR154W TY2B-CP25384 1770 aa3.25□□□□□ -1.89
RTT107YHR154W TY2B-DR2Q03494 1770 aa3.25□□□□□ -1.89
RTT107YHR154W TY1B-DR1Q03855 1755 aa3.25□□□□□ -1.89
RTT107YHR154W TY2B-DR3Q07791 1770 aaKnown RBP3.25□□□□□ -1.89
RTT107YHR154W TY2B-OR1Q12113 1770 aa3.25□□□□□ -1.89
RTT107YHR154W TY2B-DR1Q12472 1770 aa3.25□□□□□ -1.89
RTT107YHR154W TY2B-OR2Q12501 1770 aa3.25□□□□□ -1.89
RTT107YHR154W YOR093CQ12275 1648 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms