RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C RTG1P32607 177 aa6.51□□□□□ -1.37
SWC4YGR002C YEL023CP39992 682 aa6.5□□□□□ -1.37
SWC4YGR002C YNL035CP53962 389 aaKnown RBP6.5□□□□□ -1.37
SWC4YGR002C FKH1P40466 484 aa6.5□□□□□ -1.37
SWC4YGR002C IFH1P39520 1085 aa6.49□□□□□ -1.37
SWC4YGR002C JIP4Q03361 876 aa6.49□□□□□ -1.37
SWC4YGR002C PTC4P38089 393 aa6.47□□□□□ -1.37
SWC4YGR002C TFG1P41895 735 aaPredicted RBP6.47□□□□□ -1.37
SWC4YGR002C YJL171CP46992 396 aa6.47□□□□□ -1.37
SWC4YGR002C NCR1Q12200 1170 aa6.46□□□□□ -1.38
SWC4YGR002C SEC61P32915 480 aa6.45□□□□□ -1.38
SWC4YGR002C AIR2Q12476 344 aaKnown RBP6.45□□□□□ -1.38
SWC4YGR002C VPS70P47161 811 aa6.44□□□□□ -1.38
SWC4YGR002C SOL3P38858 249 aa6.42□□□□□ -1.38
SWC4YGR002C DAN4P47179 1161 aa6.42□□□□□ -1.38
SWC4YGR002C YGR273CP53329 174 aa6.42□□□□□ -1.38
SWC4YGR002C SAS10Q12136 610 aaPredicted RBP6.42□□□□□ -1.38
SWC4YGR002C YPR148CQ06523 435 aa6.41□□□□□ -1.38
SWC4YGR002C BMT6Q12291 365 aa6.39□□□□□ -1.39
SWC4YGR002C MPH3P0CE00 602 aa6.38□□□□□ -1.39
SWC4YGR002C VHR2P40041 505 aa6.38□□□□□ -1.39
SWC4YGR002C AI4P03878 556 aa6.37□□□□□ -1.39
SWC4YGR002C NST1P53935 1240 aa6.37□□□□□ -1.39
SWC4YGR002C PML39Q03760 334 aa6.37□□□□□ -1.39
SWC4YGR002C YDL129WQ07555 291 aa6.37□□□□□ -1.39
SWC4YGR002C SAP30P38429 201 aa6.36□□□□□ -1.39
SWC4YGR002C KEX1P09620 729 aa6.34□□□□□ -1.39
SWC4YGR002C REF2P42073 533 aaPredicted RBP6.34□□□□□ -1.39
SWC4YGR002C ILV3P39522 585 aaKnown RBP6.33□□□□□ -1.4
SWC4YGR002C YLR326WQ06170 240 aaKnown RBP6.33□□□□□ -1.4
SWC4YGR002C UBP14P38237 781 aaKnown RBP6.32□□□□□ -1.4
SWC4YGR002C KIC1P38692 1080 aa6.32□□□□□ -1.4
SWC4YGR002C CKB1P43639 278 aa6.32□□□□□ -1.4
SWC4YGR002C PEX29Q03370 554 aa6.32□□□□□ -1.4
SWC4YGR002C RAD54P32863 898 aa6.31□□□□□ -1.4
SWC4YGR002C MID1P41821 548 aa6.31□□□□□ -1.4
SWC4YGR002C SLI15P38283 698 aa6.29□□□□□ -1.4
SWC4YGR002C PBS2P08018 668 aa6.26□□□□□ -1.41
SWC4YGR002C SPB4P25808 606 aaPredicted RBP6.26□□□□□ -1.41
SWC4YGR002C PCS60P38137 543 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
SWC4YGR002C ELP4Q02884 456 aaKnown RBP6.25□□□□□ -1.41
SWC4YGR002C YDR090CQ03193 310 aa6.25□□□□□ -1.41
SWC4YGR002C MAK21Q12176 1025 aaKnown RBP6.25□□□□□ -1.41
SWC4YGR002C MPC54Q08550 464 aa6.24□□□□□ -1.41
SWC4YGR002C RPP1BP10622 106 aaKnown RBP6.23□□□□□ -1.41
SWC4YGR002C COX6P00427 148 aa6.22□□□□□ -1.41
SWC4YGR002C PRE3P38624 215 aa6.21□□□□□ -1.42
SWC4YGR002C YDR344CQ05510 147 aa6.21□□□□□ -1.42
SWC4YGR002C DPL1Q05567 589 aa6.21□□□□□ -1.42
SWC4YGR002C CDC73Q06697 393 aa6.21□□□□□ -1.42
SWC4YGR002C CHL1P22516 861 aaPredicted RBP6.2□□□□□ -1.42
SWC4YGR002C ARH1P48360 493 aa6.2□□□□□ -1.42
SWC4YGR002C NMA111P53920 997 aa6.19□□□□□ -1.42
SWC4YGR002C HAP5Q02516 242 aa6.19□□□□□ -1.42
SWC4YGR002C MAM3Q12296 706 aa6.19□□□□□ -1.42
SWC4YGR002C LEU3P08638 886 aa6.17□□□□□ -1.42
SWC4YGR002C DSF2P38213 736 aa6.16□□□□□ -1.42
SWC4YGR002C PEX21P50091 288 aa6.16□□□□□ -1.42
SWC4YGR002C IES2P40154 320 aa6.16□□□□□ -1.42
SWC4YGR002C ISU2Q12056 156 aa6.16□□□□□ -1.42
SWC4YGR002C SPT23P35210 1082 aa6.13□□□□□ -1.43
SWC4YGR002C ORC6P38826 435 aa6.12□□□□□ -1.43
SWC4YGR002C PTC2P39966 464 aaKnown RBP6.11□□□□□ -1.43
SWC4YGR002C BNI4P53858 892 aa6.11□□□□□ -1.43
SWC4YGR002C CSC1Q06538 782 aa6.11□□□□□ -1.43
SWC4YGR002C TFB4Q12004 338 aa6.09□□□□□ -1.43
SWC4YGR002C YRR1Q12172 810 aa6.09□□□□□ -1.43
SWC4YGR002C TUM1Q08686 304 aaKnown RBP6.08□□□□□ -1.44
SWC4YGR002C BCK2P33306 851 aa6.08□□□□□ -1.44
SWC4YGR002C VRP1P37370 817 aa6.07□□□□□ -1.44
SWC4YGR002C MVP1P40959 511 aaKnown RBP6.07□□□□□ -1.44
SWC4YGR002C NUP42P49686 430 aaKnown RBP6.07□□□□□ -1.44
SWC4YGR002C PDR1P12383 1068 aa6.06□□□□□ -1.44
SWC4YGR002C GAP1P19145 602 aaPredicted RBP6.06□□□□□ -1.44
SWC4YGR002C DIT2P21595 489 aa6.06□□□□□ -1.44
SWC4YGR002C PSE1P32337 1089 aaKnown RBP6.06□□□□□ -1.44
SWC4YGR002C YPR109WQ06104 294 aa6.06□□□□□ -1.44
SWC4YGR002C RGR1P19263 1082 aa6.05□□□□□ -1.44
SWC4YGR002C LEO1P38439 464 aa6.05□□□□□ -1.44
SWC4YGR002C YML082WQ04533 649 aaKnown RBP6.03□□□□□ -1.44
SWC4YGR002C RPN1P38764 993 aaKnown RBP6.02□□□□□ -1.45
SWC4YGR002C NPL4P33755 580 aa6.01□□□□□ -1.45
SWC4YGR002C GLC3P32775 704 aa6□□□□□ -1.45
SWC4YGR002C YNR021WP53723 404 aaKnown RBP6□□□□□ -1.45
SWC4YGR002C CLB5P30283 435 aa5.99□□□□□ -1.45
SWC4YGR002C NUD1P32336 851 aa5.99□□□□□ -1.45
SWC4YGR002C TEA1P47988 759 aa5.99□□□□□ -1.45
SWC4YGR002C ATF2P53296 535 aa5.99□□□□□ -1.45
SWC4YGR002C RAM1P22007 431 aa5.99□□□□□ -1.45
SWC4YGR002C YPR015CQ12531 247 aa5.99□□□□□ -1.45
SWC4YGR002C GYP1Q08484 637 aa5.97□□□□□ -1.45
SWC4YGR002C XDJ1P39102 459 aa5.96□□□□□ -1.46
SWC4YGR002C STR2P47164 639 aa5.95□□□□□ -1.46
SWC4YGR002C ISM1P48526 1002 aa5.95□□□□□ -1.46
SWC4YGR002C GCD11P32481 527 aaKnown RBP5.94□□□□□ -1.46
SWC4YGR002C YMR196WQ04336 1088 aa5.92□□□□□ -1.46
SWC4YGR002C BUD20Q08004 166 aaPredicted RBP5.92□□□□□ -1.46
SWC4YGR002C PRT1P06103 763 aaKnown RBP5.91□□□□□ -1.46
SWC4YGR002C KEX2P13134 814 aa5.91□□□□□ -1.46
SWC4YGR002C KIN1P13185 1064 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms