RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA8, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA8YEL051W COQ8P27697 501 aa7.37□□□□□ -1.23
VMA8YEL051W EDS1P38073 919 aa7.37□□□□□ -1.23
VMA8YEL051W JIP4Q03361 876 aa7.37□□□□□ -1.23
VMA8YEL051W GYP5Q12344 894 aa7.37□□□□□ -1.23
VMA8YEL051W PTC3P34221 468 aaKnown RBP7.33□□□□□ -1.24
VMA8YEL051W ABP1P15891 592 aaKnown RBP7.32□□□□□ -1.24
VMA8YEL051W GRE2Q12068 342 aaKnown RBP7.32□□□□□ -1.24
VMA8YEL051W YDR344CQ05510 147 aa7.31□□□□□ -1.24
VMA8YEL051W DCW1P36091 449 aa7.3□□□□□ -1.24
VMA8YEL051W NOP53Q12080 455 aaKnown RBP7.29□□□□□ -1.24
VMA8YEL051W HTA1P04911 132 aaKnown RBP7.28□□□□□ -1.24
VMA8YEL051W HTA2P04912 132 aa7.28□□□□□ -1.24
VMA8YEL051W XDJ1P39102 459 aa7.28□□□□□ -1.24
VMA8YEL051W ATH1P48016 1211 aa7.27□□□□□ -1.25
VMA8YEL051W GUT1P32190 709 aa7.26□□□□□ -1.25
VMA8YEL051W PTC4P38089 393 aa7.26□□□□□ -1.25
VMA8YEL051W SET1P38827 1080 aaKnown RBP7.26□□□□□ -1.25
VMA8YEL051W VRP1P37370 817 aa7.25□□□□□ -1.25
VMA8YEL051W YEL023CP39992 682 aa7.25□□□□□ -1.25
VMA8YEL051W RGA2Q06407 1009 aa7.25□□□□□ -1.25
VMA8YEL051W SOL3P38858 249 aa7.17□□□□□ -1.26
VMA8YEL051W DPS1P04802 557 aaKnown RBP7.16□□□□□ -1.26
VMA8YEL051W DMA1P38823 416 aa7.16□□□□□ -1.26
VMA8YEL051W NST1P53935 1240 aa7.15□□□□□ -1.26
VMA8YEL051W PML39Q03760 334 aa7.14□□□□□ -1.27
VMA8YEL051W YGR273CP53329 174 aa7.12□□□□□ -1.27
VMA8YEL051W ELP4Q02884 456 aaKnown RBP7.12□□□□□ -1.27
VMA8YEL051W IFH1P39520 1085 aa7.11□□□□□ -1.27
VMA8YEL051W SRC1Q03707 834 aa7.11□□□□□ -1.27
VMA8YEL051W AI4P03878 556 aa7.09□□□□□ -1.27
VMA8YEL051W MPH3P0CE00 602 aa7.09□□□□□ -1.27
VMA8YEL051W ARH1P48360 493 aa7.06□□□□□ -1.28
VMA8YEL051W YPR148CQ06523 435 aa7.06□□□□□ -1.28
VMA8YEL051W RGA1P39083 1007 aa7.05□□□□□ -1.28
VMA8YEL051W ILV3P39522 585 aaKnown RBP7.05□□□□□ -1.28
VMA8YEL051W VPS70P47161 811 aa7.03□□□□□ -1.28
VMA8YEL051W UBP14P38237 781 aaKnown RBP7.02□□□□□ -1.29
VMA8YEL051W MID1P41821 548 aa7.02□□□□□ -1.29
VMA8YEL051W KEX1P09620 729 aa7.01□□□□□ -1.29
VMA8YEL051W VHR2P40041 505 aa7□□□□□ -1.29
VMA8YEL051W YLR326WQ06170 240 aaKnown RBP6.99□□□□□ -1.29
VMA8YEL051W RQC2Q12532 1038 aaKnown RBP6.99□□□□□ -1.29
VMA8YEL051W SPT23P35210 1082 aa6.97□□□□□ -1.29
VMA8YEL051W SLI15P38283 698 aa6.97□□□□□ -1.29
VMA8YEL051W REF2P42073 533 aaPredicted RBP6.97□□□□□ -1.29
VMA8YEL051W SAS10Q12136 610 aaPredicted RBP6.96□□□□□ -1.3
VMA8YEL051W PEX29Q03370 554 aa6.94□□□□□ -1.3
VMA8YEL051W RAD54P32863 898 aa6.93□□□□□ -1.3
VMA8YEL051W PCS60P38137 543 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
VMA8YEL051W YDR090CQ03193 310 aa6.93□□□□□ -1.3
VMA8YEL051W CKB1P43639 278 aa6.92□□□□□ -1.3
VMA8YEL051W MPC54Q08550 464 aa6.92□□□□□ -1.3
VMA8YEL051W KIC1P38692 1080 aa6.89□□□□□ -1.31
VMA8YEL051W DPL1Q05567 589 aa6.89□□□□□ -1.31
VMA8YEL051W HAP5Q02516 242 aa6.88□□□□□ -1.31
VMA8YEL051W COX6P00427 148 aa6.87□□□□□ -1.31
VMA8YEL051W BNI4P53858 892 aa6.87□□□□□ -1.31
VMA8YEL051W NMA111P53920 997 aa6.87□□□□□ -1.31
VMA8YEL051W YML082WQ04533 649 aaKnown RBP6.87□□□□□ -1.31
VMA8YEL051W CDC73Q06697 393 aa6.87□□□□□ -1.31
VMA8YEL051W MAK21Q12176 1025 aaKnown RBP6.87□□□□□ -1.31
VMA8YEL051W PBS2P08018 668 aa6.84□□□□□ -1.31
VMA8YEL051W RAS1P01119 309 aa6.83□□□□□ -1.32
VMA8YEL051W RPP1BP10622 106 aaKnown RBP6.83□□□□□ -1.32
VMA8YEL051W ISU2Q12056 156 aa6.83□□□□□ -1.32
VMA8YEL051W PTC2P39966 464 aaKnown RBP6.81□□□□□ -1.32
VMA8YEL051W SPB4P25808 606 aaPredicted RBP6.78□□□□□ -1.32
VMA8YEL051W DSF2P38213 736 aa6.78□□□□□ -1.32
VMA8YEL051W GAP1P19145 602 aaPredicted RBP6.76□□□□□ -1.33
VMA8YEL051W ORC6P38826 435 aa6.76□□□□□ -1.33
VMA8YEL051W CSC1Q06538 782 aa6.76□□□□□ -1.33
VMA8YEL051W YPR015CQ12531 247 aa6.76□□□□□ -1.33
VMA8YEL051W MAM3Q12296 706 aa6.75□□□□□ -1.33
VMA8YEL051W PEX21P50091 288 aa6.74□□□□□ -1.33
VMA8YEL051W TFB4Q12004 338 aa6.73□□□□□ -1.33
VMA8YEL051W PDR1P12383 1068 aa6.71□□□□□ -1.34
VMA8YEL051W RAM1P22007 431 aa6.71□□□□□ -1.34
VMA8YEL051W YRR1Q12172 810 aa6.71□□□□□ -1.34
VMA8YEL051W MVP1P40959 511 aaKnown RBP6.7□□□□□ -1.34
VMA8YEL051W TUM1Q08686 304 aaKnown RBP6.7□□□□□ -1.34
VMA8YEL051W RGR1P19263 1082 aa6.69□□□□□ -1.34
VMA8YEL051W IES2P40154 320 aa6.69□□□□□ -1.34
VMA8YEL051W PSE1P32337 1089 aaKnown RBP6.67□□□□□ -1.34
VMA8YEL051W NUP42P49686 430 aaKnown RBP6.67□□□□□ -1.34
VMA8YEL051W TRK1P12685 1235 aa6.66□□□□□ -1.34
VMA8YEL051W YPR109WQ06104 294 aa6.66□□□□□ -1.34
VMA8YEL051W DIT2P21595 489 aa6.64□□□□□ -1.35
VMA8YEL051W SDH2P21801 266 aa6.64□□□□□ -1.35
VMA8YEL051W AMS1P22855 1083 aa6.64□□□□□ -1.35
VMA8YEL051W NUD1P32336 851 aa6.62□□□□□ -1.35
VMA8YEL051W BUD20Q08004 166 aaPredicted RBP6.61□□□□□ -1.35
VMA8YEL051W STR2P47164 639 aa6.6□□□□□ -1.35
VMA8YEL051W ISM1P48526 1002 aa6.6□□□□□ -1.35
VMA8YEL051W GYP1Q08484 637 aa6.6□□□□□ -1.35
VMA8YEL051W NPL4P33755 580 aa6.59□□□□□ -1.35
VMA8YEL051W YPL062WQ02781 134 aa6.59□□□□□ -1.35
VMA8YEL051W PRT1P06103 763 aaKnown RBP6.57□□□□□ -1.36
VMA8YEL051W CLB5P30283 435 aa6.57□□□□□ -1.36
VMA8YEL051W SAS4Q04003 481 aa6.57□□□□□ -1.36
VMA8YEL051W GCD11P32481 527 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 247.7 ms