RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA8, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA8YEL051W MTC1P47018 478 aaKnown RBP12.61□□□□□ -0.39
VMA8YEL051W FAP1P53971 965 aa12.43□□□□□ -0.42
VMA8YEL051W PRY3P47033 881 aa11.76□□□□□ -0.53
VMA8YEL051W DRS1P32892 752 aaKnown RBP11.71□□□□□ -0.53
VMA8YEL051W AAD16Q02895 342 aa11.25□□□□□ -0.61
VMA8YEL051W YCK3P39962 524 aa11.24□□□□□ -0.61
VMA8YEL051W PRI1P10363 409 aa11.23□□□□□ -0.61
VMA8YEL051W HAA1Q12753 694 aaKnown RBP10.97□□□□□ -0.65
VMA8YEL051W ISW2Q08773 1120 aa10.61□□□□□ -0.71
VMA8YEL051W RPG1P38249 964 aaKnown RBP10.58□□□□□ -0.72
VMA8YEL051W TSR3Q12094 313 aaKnown RBP10.54□□□□□ -0.72
VMA8YEL051W DIP2Q12220 943 aaPredicted RBP10.16□□□□□ -0.78
VMA8YEL051W MRPL32P25348 183 aa10.07□□□□□ -0.8
VMA8YEL051W YGL015CP33199 130 aa9.95□□□□□ -0.82
VMA8YEL051W BFR2Q06631 534 aaKnown RBP9.89□□□□□ -0.83
VMA8YEL051W AVT3P36062 692 aa9.88□□□□□ -0.83
VMA8YEL051W RSE1Q04693 1361 aaKnown RBP9.74□□□□□ -0.85
VMA8YEL051W BUD31P25337 157 aaPredicted RBP9.63□□□□□ -0.87
VMA8YEL051W RPL17AP05740 184 aaKnown RBP9.5□□□□□ -0.89
VMA8YEL051W RPL17BP46990 184 aaKnown RBP9.5□□□□□ -0.89
VMA8YEL051W REB1P21538 810 aa9.49□□□□□ -0.89
VMA8YEL051W CDC27P38042 758 aa9.49□□□□□ -0.89
VMA8YEL051W MAP2P38174 421 aaKnown RBP9.28□□□□□ -0.92
VMA8YEL051W UBP10P53874 792 aaPredicted RBP9.28□□□□□ -0.92
VMA8YEL051W YKR023WP36119 530 aaKnown RBP9.21□□□□□ -0.94
VMA8YEL051W SPT21P35209 758 aa9.08□□□□□ -0.96
VMA8YEL051W SIS1P25294 352 aaKnown RBP9.01□□□□□ -0.97
VMA8YEL051W DCD1P06773 312 aa9□□□□□ -0.97
VMA8YEL051W TFC8Q12308 588 aa9□□□□□ -0.97
VMA8YEL051W HOP09932 586 aa8.99□□□□□ -0.97
VMA8YEL051W TFA1P36100 482 aa8.95□□□□□ -0.98
VMA8YEL051W TGL3P40308 642 aa8.88□□□□□ -0.99
VMA8YEL051W SCY1P53009 804 aa8.88□□□□□ -0.99
VMA8YEL051W UBP9P39967 754 aa8.86□□□□□ -0.99
VMA8YEL051W TIF4632P39936 914 aaKnown RBP8.85□□□□□ -0.99
VMA8YEL051W SLX5P32828 619 aaKnown RBP8.8□□□□□ -1
VMA8YEL051W RIM101P33400 625 aa8.78□□□□□ -1
VMA8YEL051W BCH2P36122 765 aa8.66□□□□□ -1.02
VMA8YEL051W OXP1P28273 1286 aa8.5□□□□□ -1.05
VMA8YEL051W MST1P07236 462 aa8.44□□□□□ -1.06
VMA8YEL051W YBL029C-AQ3E756 94 aa8.44□□□□□ -1.06
VMA8YEL051W YIL055CP40523 627 aaKnown RBP8.39□□□□□ -1.07
VMA8YEL051W BDF1P35817 686 aa8.36□□□□□ -1.07
VMA8YEL051W EPS1P40557 701 aa8.36□□□□□ -1.07
VMA8YEL051W PTP3P40048 928 aa8.35□□□□□ -1.07
VMA8YEL051W VNX1P42839 908 aa8.31□□□□□ -1.08
VMA8YEL051W YOR238WQ08634 303 aa8.29□□□□□ -1.08
VMA8YEL051W YAH1Q12184 172 aaKnown RBP8.29□□□□□ -1.08
VMA8YEL051W RSM7P47150 247 aa8.25□□□□□ -1.09
VMA8YEL051W NSR1P27476 414 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1 RIP-Chip
VMA8YEL051W AIR2Q12476 344 aaKnown RBP8.19□□□□□ -1.1
VMA8YEL051W SPP1Q03012 353 aa8.18□□□□□ -1.1
VMA8YEL051W YLR271WQ06152 274 aa8.18□□□□□ -1.1
VMA8YEL051W AI2P03876 854 aa8.15□□□□□ -1.1
VMA8YEL051W SSP1P38871 571 aa8.15□□□□□ -1.1
VMA8YEL051W FKH1P40466 484 aa8.13□□□□□ -1.11
VMA8YEL051W BBC1P47068 1157 aa8.13□□□□□ -1.11
VMA8YEL051W WSC3Q12215 556 aa8.12□□□□□ -1.11
VMA8YEL051W YAP5P40574 245 aa8.09□□□□□ -1.11
VMA8YEL051W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
VMA8YEL051W TIF11P38912 153 aaKnown RBP8.05□□□□□ -1.12
VMA8YEL051W YJL171CP46992 396 aa8.04□□□□□ -1.12
VMA8YEL051W PSD2P53037 1138 aaKnown RBP8.01□□□□□ -1.13
VMA8YEL051W LDB19Q12502 818 aa7.94□□□□□ -1.14
VMA8YEL051W IOC2Q12072 812 aa7.93□□□□□ -1.14
VMA8YEL051W MGA2P40578 1113 aa7.92□□□□□ -1.14
VMA8YEL051W GTT3P39996 337 aa7.9□□□□□ -1.14
VMA8YEL051W BMT6Q12291 365 aa7.9□□□□□ -1.14
VMA8YEL051W ULI1P43604 169 aa7.89□□□□□ -1.15
VMA8YEL051W CST9Q06032 482 aa7.89□□□□□ -1.15
VMA8YEL051W MRM1P25270 412 aa7.87□□□□□ -1.15
VMA8YEL051W PIB1Q06651 286 aa7.8□□□□□ -1.16
VMA8YEL051W RTG3P38165 486 aa7.73□□□□□ -1.17
VMA8YEL051W MSB4Q12317 492 aa7.72□□□□□ -1.17
VMA8YEL051W RTG1P32607 177 aa7.7□□□□□ -1.18
VMA8YEL051W VPS29P38759 282 aa7.7□□□□□ -1.18
VMA8YEL051W RCR1P38212 213 aa7.68□□□□□ -1.18
VMA8YEL051W EAP1P36041 632 aaKnown RBP7.67□□□□□ -1.18
VMA8YEL051W TRP5P00931 707 aaKnown RBP7.66□□□□□ -1.18
VMA8YEL051W YMR1P47147 688 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
VMA8YEL051W NCR1Q12200 1170 aa7.66□□□□□ -1.18
VMA8YEL051W YOL036WQ08206 761 aa7.65□□□□□ -1.18
VMA8YEL051W SET4P42948 560 aa7.63□□□□□ -1.19
VMA8YEL051W DBP1P24784 617 aaKnown RBP7.62□□□□□ -1.19
VMA8YEL051W STS1P38637 319 aa7.6□□□□□ -1.19
VMA8YEL051W YFR006WP43590 535 aa7.6□□□□□ -1.19
VMA8YEL051W YNL035CP53962 389 aaKnown RBP7.6□□□□□ -1.19
VMA8YEL051W SEC61P32915 480 aa7.59□□□□□ -1.19
VMA8YEL051W RAM2P29703 316 aa7.53□□□□□ -1.2
VMA8YEL051W VMA1P17255 1071 aaKnown RBP7.51□□□□□ -1.21
VMA8YEL051W BCK2P33306 851 aa7.5□□□□□ -1.21
VMA8YEL051W SAM3Q08986 587 aa7.49□□□□□ -1.21
VMA8YEL051W DAN4P47179 1161 aa7.48□□□□□ -1.21
VMA8YEL051W MAK11P20484 414 aaKnown RBP7.47□□□□□ -1.21
VMA8YEL051W SAP30P38429 201 aa7.46□□□□□ -1.22
VMA8YEL051W CHL1P22516 861 aaPredicted RBP7.42□□□□□ -1.22
VMA8YEL051W TFG1P41895 735 aaPredicted RBP7.41□□□□□ -1.22
VMA8YEL051W MIF2P35201 549 aa7.4□□□□□ -1.22
VMA8YEL051W YDL129WQ07555 291 aa7.39□□□□□ -1.23
VMA8YEL051W PRE3P38624 215 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms