RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C IFH1P39520 1085 aa10.22□□□□□ -0.77
TCA17YEL048C YEL023CP39992 682 aa10.18□□□□□ -0.78
TCA17YEL048C YNL035CP53962 389 aaKnown RBP10.18□□□□□ -0.78
TCA17YEL048C RTG1P32607 177 aa10.17□□□□□ -0.78
TCA17YEL048C JIP4Q03361 876 aa10.17□□□□□ -0.78
TCA17YEL048C FKH1P40466 484 aa10.15□□□□□ -0.78
TCA17YEL048C PTC4P38089 393 aa10.14□□□□□ -0.79
TCA17YEL048C SEC61P32915 480 aa10.12□□□□□ -0.79
TCA17YEL048C TFG1P41895 735 aaPredicted RBP10.11□□□□□ -0.79
TCA17YEL048C YPR148CQ06523 435 aa10.1□□□□□ -0.79
TCA17YEL048C NCR1Q12200 1170 aa10.1□□□□□ -0.79
TCA17YEL048C AIR2Q12476 344 aaKnown RBP10.1□□□□□ -0.79
TCA17YEL048C YJL171CP46992 396 aa10.08□□□□□ -0.8
TCA17YEL048C VPS70P47161 811 aa10.08□□□□□ -0.8
TCA17YEL048C DAN4P47179 1161 aa10.08□□□□□ -0.8
TCA17YEL048C SOL3P38858 249 aa10.07□□□□□ -0.8
TCA17YEL048C YGR273CP53329 174 aa10.07□□□□□ -0.8
TCA17YEL048C NST1P53935 1240 aa10.02□□□□□ -0.81
TCA17YEL048C SAS10Q12136 610 aaPredicted RBP10.02□□□□□ -0.81
TCA17YEL048C AI4P03878 556 aa10.01□□□□□ -0.81
TCA17YEL048C MPH3P0CE00 602 aa10.01□□□□□ -0.81
TCA17YEL048C BMT6Q12291 365 aa9.99□□□□□ -0.81
TCA17YEL048C VHR2P40041 505 aa9.97□□□□□ -0.81
TCA17YEL048C CKB1P43639 278 aa9.97□□□□□ -0.81
TCA17YEL048C REF2P42073 533 aaPredicted RBP9.96□□□□□ -0.82
TCA17YEL048C PML39Q03760 334 aa9.96□□□□□ -0.82
TCA17YEL048C YDL129WQ07555 291 aa9.96□□□□□ -0.82
TCA17YEL048C KEX1P09620 729 aa9.93□□□□□ -0.82
TCA17YEL048C UBP14P38237 781 aaKnown RBP9.92□□□□□ -0.82
TCA17YEL048C YLR326WQ06170 240 aaKnown RBP9.92□□□□□ -0.82
TCA17YEL048C SAP30P38429 201 aa9.91□□□□□ -0.82
TCA17YEL048C ILV3P39522 585 aaKnown RBP9.91□□□□□ -0.82
TCA17YEL048C RAD54P32863 898 aa9.88□□□□□ -0.83
TCA17YEL048C KIC1P38692 1080 aa9.88□□□□□ -0.83
TCA17YEL048C MID1P41821 548 aa9.86□□□□□ -0.83
TCA17YEL048C PEX29Q03370 554 aa9.86□□□□□ -0.83
TCA17YEL048C SLI15P38283 698 aa9.84□□□□□ -0.83
TCA17YEL048C MAK21Q12176 1025 aaKnown RBP9.84□□□□□ -0.83
TCA17YEL048C PBS2P08018 668 aa9.83□□□□□ -0.84
TCA17YEL048C PCS60P38137 543 aaKnown RBP RIP-Chip data9.82□□□□□ -0.84not detected
TCA17YEL048C SPB4P25808 606 aaPredicted RBP9.81□□□□□ -0.84
TCA17YEL048C YDR090CQ03193 310 aa9.81□□□□□ -0.84
TCA17YEL048C COX6P00427 148 aa9.79□□□□□ -0.84
TCA17YEL048C RPP1BP10622 106 aaKnown RBP9.77□□□□□ -0.85
TCA17YEL048C ELP4Q02884 456 aaKnown RBP9.75□□□□□ -0.85
TCA17YEL048C MPC54Q08550 464 aa9.75□□□□□ -0.85
TCA17YEL048C DPL1Q05567 589 aa9.74□□□□□ -0.85
TCA17YEL048C PRE3P38624 215 aa9.72□□□□□ -0.85
TCA17YEL048C ARH1P48360 493 aa9.72□□□□□ -0.85
TCA17YEL048C MAM3Q12296 706 aa9.72□□□□□ -0.85
TCA17YEL048C CHL1P22516 861 aaPredicted RBP9.71□□□□□ -0.86
TCA17YEL048C DSF2P38213 736 aa9.71□□□□□ -0.86
TCA17YEL048C CDC73Q06697 393 aa9.7□□□□□ -0.86
TCA17YEL048C HAP5Q02516 242 aa9.69□□□□□ -0.86
TCA17YEL048C NMA111P53920 997 aa9.68□□□□□ -0.86
TCA17YEL048C YDR344CQ05510 147 aa9.66□□□□□ -0.86
TCA17YEL048C ISU2Q12056 156 aa9.65□□□□□ -0.86
TCA17YEL048C SPT23P35210 1082 aa9.63□□□□□ -0.87
TCA17YEL048C IES2P40154 320 aa9.63□□□□□ -0.87
TCA17YEL048C PEX21P50091 288 aa9.63□□□□□ -0.87
TCA17YEL048C CSC1Q06538 782 aa9.61□□□□□ -0.87
TCA17YEL048C ORC6P38826 435 aa9.6□□□□□ -0.87
TCA17YEL048C BNI4P53858 892 aa9.59□□□□□ -0.87
TCA17YEL048C PTC2P39966 464 aaKnown RBP9.57□□□□□ -0.88
TCA17YEL048C TFB4Q12004 338 aa9.56□□□□□ -0.88
TCA17YEL048C GAP1P19145 602 aaPredicted RBP9.55□□□□□ -0.88
TCA17YEL048C PSE1P32337 1089 aaKnown RBP9.54□□□□□ -0.88
TCA17YEL048C NUP42P49686 430 aaKnown RBP9.54□□□□□ -0.88
TCA17YEL048C MVP1P40959 511 aaKnown RBP9.52□□□□□ -0.89
TCA17YEL048C BCK2P33306 851 aa9.51□□□□□ -0.89
TCA17YEL048C TUM1Q08686 304 aaKnown RBP9.51□□□□□ -0.89
TCA17YEL048C YRR1Q12172 810 aa9.51□□□□□ -0.89
TCA17YEL048C RGR1P19263 1082 aa9.5□□□□□ -0.89
TCA17YEL048C DIT2P21595 489 aa9.5□□□□□ -0.89
TCA17YEL048C VRP1P37370 817 aa9.48□□□□□ -0.89
TCA17YEL048C YML082WQ04533 649 aaKnown RBP9.48□□□□□ -0.89
TCA17YEL048C LEU3P08638 886 aa9.47□□□□□ -0.89
TCA17YEL048C YPR109WQ06104 294 aa9.47□□□□□ -0.89
TCA17YEL048C PDR1P12383 1068 aa9.46□□□□□ -0.9
TCA17YEL048C YNR021WP53723 404 aaKnown RBP9.44□□□□□ -0.9
TCA17YEL048C CLB5P30283 435 aa9.43□□□□□ -0.9
TCA17YEL048C RAM1P22007 431 aa9.4□□□□□ -0.9
TCA17YEL048C NPL4P33755 580 aa9.4□□□□□ -0.9
TCA17YEL048C ATF2P53296 535 aa9.4□□□□□ -0.9
TCA17YEL048C NUD1P32336 851 aa9.39□□□□□ -0.91
TCA17YEL048C TEA1P47988 759 aa9.39□□□□□ -0.91
TCA17YEL048C GLC3P32775 704 aa9.37□□□□□ -0.91
TCA17YEL048C YPR015CQ12531 247 aa9.37□□□□□ -0.91
TCA17YEL048C XDJ1P39102 459 aa9.35□□□□□ -0.91
TCA17YEL048C GYP1Q08484 637 aa9.34□□□□□ -0.91
TCA17YEL048C RPN1P38764 993 aaKnown RBP9.32□□□□□ -0.92
TCA17YEL048C STR2P47164 639 aa9.32□□□□□ -0.92
TCA17YEL048C ISM1P48526 1002 aa9.31□□□□□ -0.92
TCA17YEL048C AIM7Q12156 149 aa9.31□□□□□ -0.92
TCA17YEL048C GCD11P32481 527 aaKnown RBP9.29□□□□□ -0.92
TCA17YEL048C BUD20Q08004 166 aaPredicted RBP9.29□□□□□ -0.92
TCA17YEL048C PRT1P06103 763 aaKnown RBP9.28□□□□□ -0.92
TCA17YEL048C SAS4Q04003 481 aa9.27□□□□□ -0.93
TCA17YEL048C YMR196WQ04336 1088 aa9.26□□□□□ -0.93
TCA17YEL048C NIS1P53939 407 aa9.25□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms