RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeastyeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA2YDR295C VHR2P40041 505 aa5.82□□□□□ -1.48
HDA2YDR295C ABP1P15891 592 aaKnown RBP5.81□□□□□ -1.48
HDA2YDR295C GRE2Q12068 342 aaKnown RBP5.81□□□□□ -1.48
HDA2YDR295C SOL3P38858 249 aa5.8□□□□□ -1.48
HDA2YDR295C ATH1P48016 1211 aa5.8□□□□□ -1.48
HDA2YDR295C YLR326WQ06170 240 aaKnown RBP5.8□□□□□ -1.48
HDA2YDR295C MAK21Q12176 1025 aaKnown RBP5.8□□□□□ -1.48
HDA2YDR295C GUT1P32190 709 aa5.79□□□□□ -1.48
HDA2YDR295C AIM7Q12156 149 aa5.78□□□□□ -1.48
HDA2YDR295C YGR273CP53329 174 aa5.77□□□□□ -1.49
HDA2YDR295C NST1P53935 1240 aa5.76□□□□□ -1.49
HDA2YDR295C GYP5Q12344 894 aa5.75□□□□□ -1.49
HDA2YDR295C KEX1P09620 729 aa5.74□□□□□ -1.49
HDA2YDR295C PCS60P38137 543 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
HDA2YDR295C YOL036WQ08206 761 aa5.74□□□□□ -1.49
HDA2YDR295C GTT3P39996 337 aa5.72□□□□□ -1.49
HDA2YDR295C DCW1P36091 449 aa5.72□□□□□ -1.49
HDA2YDR295C GUA1P38625 525 aaKnown RBP5.72□□□□□ -1.49
HDA2YDR295C ILV3P39522 585 aaKnown RBP5.71□□□□□ -1.5
HDA2YDR295C SET4P42948 560 aa5.71□□□□□ -1.5
HDA2YDR295C RAD54P32863 898 aa5.7□□□□□ -1.5
HDA2YDR295C ATF2P53296 535 aa5.69□□□□□ -1.5
HDA2YDR295C KIC1P38692 1080 aa5.67□□□□□ -1.5
HDA2YDR295C ORC6P38826 435 aa5.67□□□□□ -1.5
HDA2YDR295C HTA1P04911 132 aaKnown RBP5.65□□□□□ -1.5
HDA2YDR295C HTA2P04912 132 aa5.65□□□□□ -1.5
HDA2YDR295C PSE1P32337 1089 aaKnown RBP5.65□□□□□ -1.5
HDA2YDR295C MPH3P0CE00 602 aa5.65□□□□□ -1.51
HDA2YDR295C RLF2Q12495 606 aa5.64□□□□□ -1.51
HDA2YDR295C AI4P03878 556 aa5.64□□□□□ -1.51
HDA2YDR295C WSC3Q12215 556 aa5.64□□□□□ -1.51
HDA2YDR295C MSB4Q12317 492 aa5.64□□□□□ -1.51
HDA2YDR295C YEL023CP39992 682 aa5.62□□□□□ -1.51
HDA2YDR295C SLI15P38283 698 aa5.61□□□□□ -1.51
HDA2YDR295C HPC2Q01448 625 aa5.61□□□□□ -1.51
HDA2YDR295C GAP1P19145 602 aaPredicted RBP5.6□□□□□ -1.51
HDA2YDR295C RGR1P19263 1082 aa5.6□□□□□ -1.51
HDA2YDR295C TFB3Q03290 321 aa5.6□□□□□ -1.51
HDA2YDR295C DAN4P47179 1161 aa5.6□□□□□ -1.51
HDA2YDR295C YBL029C-AQ3E756 94 aa5.6□□□□□ -1.51
HDA2YDR295C TRP5P00931 707 aaKnown RBP5.59□□□□□ -1.51
HDA2YDR295C KTR1P27810 393 aaKnown RBP5.58□□□□□ -1.52
HDA2YDR295C MVP1P40959 511 aaKnown RBP5.58□□□□□ -1.52
HDA2YDR295C PKC1P24583 1151 aa5.58□□□□□ -1.52
HDA2YDR295C VNX1P42839 908 aa5.57□□□□□ -1.52
HDA2YDR295C CSN12P47130 423 aa5.57□□□□□ -1.52
HDA2YDR295C TEA1P47988 759 aa5.57□□□□□ -1.52
HDA2YDR295C CDC73Q06697 393 aa5.56□□□□□ -1.52
HDA2YDR295C PTC4P38089 393 aa5.55□□□□□ -1.52
HDA2YDR295C TYW1Q08960 810 aaKnown RBP5.55□□□□□ -1.52
HDA2YDR295C EAP1P36041 632 aaKnown RBP5.54□□□□□ -1.52
HDA2YDR295C HGH1P48362 394 aaKnown RBP5.54□□□□□ -1.52
HDA2YDR295C NIS1P53939 407 aa5.54□□□□□ -1.52
HDA2YDR295C SIS1P25294 352 aaKnown RBP5.53□□□□□ -1.52
HDA2YDR295C SSA2P10592 639 aaKnown RBP5.52□□□□□ -1.53
HDA2YDR295C TIF11P38912 153 aaKnown RBP5.52□□□□□ -1.53
HDA2YDR295C ULI1P43604 169 aa5.52□□□□□ -1.53
HDA2YDR295C YPR109WQ06104 294 aa5.52□□□□□ -1.53
HDA2YDR295C CSC1Q06538 782 aa5.52□□□□□ -1.53
HDA2YDR295C IOC2Q12072 812 aa5.52□□□□□ -1.53
HDA2YDR295C BRL1P38770 471 aa5.52□□□□□ -1.53
HDA2YDR295C MID1P41821 548 aa5.52□□□□□ -1.53
HDA2YDR295C FPK1P53739 893 aa5.51□□□□□ -1.53
HDA2YDR295C JIP4Q03361 876 aa5.51□□□□□ -1.53
HDA2YDR295C CLB5P30283 435 aa5.5□□□□□ -1.53
HDA2YDR295C GLN1P32288 370 aaKnown RBP5.5□□□□□ -1.53
HDA2YDR295C SCJ1P25303 377 aa5.49□□□□□ -1.53
HDA2YDR295C HST2P53686 357 aa5.48□□□□□ -1.53
HDA2YDR295C SPP1Q03012 353 aa5.48□□□□□ -1.53
HDA2YDR295C MPC54Q08550 464 aa5.48□□□□□ -1.53
HDA2YDR295C TFB4Q12004 338 aa5.48□□□□□ -1.53
HDA2YDR295C BIM1P40013 344 aa5.48□□□□□ -1.53
HDA2YDR295C PML39Q03760 334 aa5.48□□□□□ -1.53
HDA2YDR295C UBP9P39967 754 aa5.47□□□□□ -1.53
HDA2YDR295C ATG32P40458 529 aa5.47□□□□□ -1.53
HDA2YDR295C YJL007CP47080 104 aa5.47□□□□□ -1.53
HDA2YDR295C TUM1Q08686 304 aaKnown RBP5.47□□□□□ -1.53
HDA2YDR295C SIT4P20604 311 aa5.47□□□□□ -1.53
HDA2YDR295C ESS1P22696 170 aa5.47□□□□□ -1.53
HDA2YDR295C YNL035CP53962 389 aaKnown RBP5.46□□□□□ -1.54
HDA2YDR295C DPL1Q05567 589 aa5.46□□□□□ -1.54
HDA2YDR295C RPP1BP10622 106 aaKnown RBP5.45□□□□□ -1.54
HDA2YDR295C YJU3P28321 313 aa5.45□□□□□ -1.54
HDA2YDR295C YMR196WQ04336 1088 aa5.45□□□□□ -1.54
HDA2YDR295C BIO2P32451 375 aa5.45□□□□□ -1.54
HDA2YDR295C MMP1Q12372 583 aa5.45□□□□□ -1.54
HDA2YDR295C LDB19Q12502 818 aa5.45□□□□□ -1.54
HDA2YDR295C PKH3Q03306 898 aaPredicted RBP5.44□□□□□ -1.54
HDA2YDR295C RAD59Q12223 238 aa5.44□□□□□ -1.54
HDA2YDR295C PEX21P50091 288 aa5.43□□□□□ -1.54
HDA2YDR295C YRR1Q12172 810 aa5.43□□□□□ -1.54
HDA2YDR295C ERG12P07277 443 aa5.43□□□□□ -1.54
HDA2YDR295C RTG1P32607 177 aa5.43□□□□□ -1.54
HDA2YDR295C PEX29Q03370 554 aa5.43□□□□□ -1.54
HDA2YDR295C YBL036CP38197 257 aa5.41□□□□□ -1.54
HDA2YDR295C TIF1P10081 395 aaKnown RBP5.41□□□□□ -1.54
HDA2YDR295C SEC61P32915 480 aa5.4□□□□□ -1.54
HDA2YDR295C NMA111P53920 997 aa5.4□□□□□ -1.54
HDA2YDR295C YDR344CQ05510 147 aa5.4□□□□□ -1.54
HDA2YDR295C ISU2Q12056 156 aa5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms