RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS23, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS23YDR246W IFH1P39520 1085 aa9.18□□□□□ -0.94
TRS23YDR246W RTG1P32607 177 aa9.15□□□□□ -0.94
TRS23YDR246W YEL023CP39992 682 aa9.15□□□□□ -0.94
TRS23YDR246W FKH1P40466 484 aa9.15□□□□□ -0.94
TRS23YDR246W YNL035CP53962 389 aaKnown RBP9.14□□□□□ -0.95
TRS23YDR246W JIP4Q03361 876 aa9.14□□□□□ -0.95
TRS23YDR246W YPR148CQ06523 435 aa9.13□□□□□ -0.95
TRS23YDR246W PTC4P38089 393 aa9.1□□□□□ -0.95
TRS23YDR246W SOL3P38858 249 aa9.09□□□□□ -0.95
TRS23YDR246W AIR2Q12476 344 aaKnown RBP9.09□□□□□ -0.95
TRS23YDR246W SEC61P32915 480 aa9.08□□□□□ -0.96
TRS23YDR246W VPS70P47161 811 aa9.08□□□□□ -0.96
TRS23YDR246W DAN4P47179 1161 aa9.07□□□□□ -0.96
TRS23YDR246W YGR273CP53329 174 aa9.07□□□□□ -0.96
TRS23YDR246W NST1P53935 1240 aa9.06□□□□□ -0.96
TRS23YDR246W NCR1Q12200 1170 aa9.06□□□□□ -0.96
TRS23YDR246W SAS10Q12136 610 aaPredicted RBP9.05□□□□□ -0.96
TRS23YDR246W TFG1P41895 735 aaPredicted RBP9.04□□□□□ -0.96
TRS23YDR246W AI4P03878 556 aa9.02□□□□□ -0.97
TRS23YDR246W YJL171CP46992 396 aa9.02□□□□□ -0.97
TRS23YDR246W MPH3P0CE00 602 aa9.01□□□□□ -0.97
TRS23YDR246W VHR2P40041 505 aa8.99□□□□□ -0.97
TRS23YDR246W ILV3P39522 585 aaKnown RBP8.97□□□□□ -0.97
TRS23YDR246W REF2P42073 533 aaPredicted RBP8.96□□□□□ -0.98
TRS23YDR246W CKB1P43639 278 aa8.96□□□□□ -0.98
TRS23YDR246W BMT6Q12291 365 aa8.96□□□□□ -0.98
TRS23YDR246W KEX1P09620 729 aa8.95□□□□□ -0.98
TRS23YDR246W PML39Q03760 334 aa8.95□□□□□ -0.98
TRS23YDR246W YLR326WQ06170 240 aaKnown RBP8.95□□□□□ -0.98
TRS23YDR246W YDL129WQ07555 291 aa8.95□□□□□ -0.98
TRS23YDR246W UBP14P38237 781 aaKnown RBP8.93□□□□□ -0.98
TRS23YDR246W SAP30P38429 201 aa8.92□□□□□ -0.98
TRS23YDR246W RAD54P32863 898 aa8.89□□□□□ -0.99
TRS23YDR246W MID1P41821 548 aa8.88□□□□□ -0.99
TRS23YDR246W SLI15P38283 698 aa8.87□□□□□ -0.99
TRS23YDR246W KIC1P38692 1080 aa8.87□□□□□ -0.99
TRS23YDR246W YDR090CQ03193 310 aa8.86□□□□□ -0.99
TRS23YDR246W PEX29Q03370 554 aa8.86□□□□□ -0.99
TRS23YDR246W PBS2P08018 668 aa8.85□□□□□ -0.99
TRS23YDR246W PCS60P38137 543 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
TRS23YDR246W MAK21Q12176 1025 aaKnown RBP8.85□□□□□ -0.99
TRS23YDR246W COX6P00427 148 aa8.81□□□□□ -1
TRS23YDR246W SPB4P25808 606 aaPredicted RBP8.8□□□□□ -1
TRS23YDR246W MPC54Q08550 464 aa8.78□□□□□ -1
TRS23YDR246W DSF2P38213 736 aa8.76□□□□□ -1.01
TRS23YDR246W DPL1Q05567 589 aa8.76□□□□□ -1.01
TRS23YDR246W MAM3Q12296 706 aa8.76□□□□□ -1.01
TRS23YDR246W RPP1BP10622 106 aaKnown RBP8.75□□□□□ -1.01
TRS23YDR246W ELP4Q02884 456 aaKnown RBP8.75□□□□□ -1.01
TRS23YDR246W YDR344CQ05510 147 aa8.75□□□□□ -1.01
TRS23YDR246W CDC73Q06697 393 aa8.75□□□□□ -1.01
TRS23YDR246W PRE3P38624 215 aa8.74□□□□□ -1.01
TRS23YDR246W ARH1P48360 493 aa8.74□□□□□ -1.01
TRS23YDR246W CHL1P22516 861 aaPredicted RBP8.71□□□□□ -1.02
TRS23YDR246W HAP5Q02516 242 aa8.71□□□□□ -1.02
TRS23YDR246W IES2P40154 320 aa8.7□□□□□ -1.02
TRS23YDR246W NMA111P53920 997 aa8.69□□□□□ -1.02
TRS23YDR246W ORC6P38826 435 aa8.68□□□□□ -1.02
TRS23YDR246W ISU2Q12056 156 aa8.67□□□□□ -1.02
TRS23YDR246W SGS1P35187 1447 aa8.64□□□□□ -1.03
TRS23YDR246W SPT23P35210 1082 aa8.64□□□□□ -1.03
TRS23YDR246W PEX21P50091 288 aa8.64□□□□□ -1.03
TRS23YDR246W CSC1Q06538 782 aa8.64□□□□□ -1.03
TRS23YDR246W BNI4P53858 892 aa8.63□□□□□ -1.03
TRS23YDR246W GAP1P19145 602 aaPredicted RBP8.62□□□□□ -1.03
TRS23YDR246W NUP42P49686 430 aaKnown RBP8.61□□□□□ -1.03
TRS23YDR246W TFB4Q12004 338 aa8.6□□□□□ -1.03
TRS23YDR246W PSE1P32337 1089 aaKnown RBP8.59□□□□□ -1.03
TRS23YDR246W PTC2P39966 464 aaKnown RBP8.59□□□□□ -1.03
TRS23YDR246W MVP1P40959 511 aaKnown RBP8.57□□□□□ -1.04
TRS23YDR246W LEU3P08638 886 aa8.56□□□□□ -1.04
TRS23YDR246W DIT2P21595 489 aa8.56□□□□□ -1.04
TRS23YDR246W YRR1Q12172 810 aa8.56□□□□□ -1.04
TRS23YDR246W RGR1P19263 1082 aa8.55□□□□□ -1.04
TRS23YDR246W TUM1Q08686 304 aaKnown RBP8.55□□□□□ -1.04
TRS23YDR246W BCK2P33306 851 aa8.54□□□□□ -1.04
TRS23YDR246W PDR1P12383 1068 aa8.53□□□□□ -1.04
TRS23YDR246W YML082WQ04533 649 aaKnown RBP8.52□□□□□ -1.05
TRS23YDR246W YPR109WQ06104 294 aa8.52□□□□□ -1.05
TRS23YDR246W VRP1P37370 817 aa8.51□□□□□ -1.05
TRS23YDR246W YNR021WP53723 404 aaKnown RBP8.5□□□□□ -1.05
TRS23YDR246W RAM1P22007 431 aa8.49□□□□□ -1.05
TRS23YDR246W CLB5P30283 435 aa8.48□□□□□ -1.05
TRS23YDR246W YPR015CQ12531 247 aa8.48□□□□□ -1.05
TRS23YDR246W GLC3P32775 704 aa8.47□□□□□ -1.05
TRS23YDR246W NUD1P32336 851 aa8.46□□□□□ -1.06
TRS23YDR246W TEA1P47988 759 aa8.44□□□□□ -1.06
TRS23YDR246W ATF2P53296 535 aa8.44□□□□□ -1.06
TRS23YDR246W NPL4P33755 580 aa8.43□□□□□ -1.06
TRS23YDR246W INO80P53115 1489 aa8.43□□□□□ -1.06
TRS23YDR246W STR2P47164 639 aa8.41□□□□□ -1.06
TRS23YDR246W ISM1P48526 1002 aa8.4□□□□□ -1.06
TRS23YDR246W XDJ1P39102 459 aa8.39□□□□□ -1.07
TRS23YDR246W AIM7Q12156 149 aa8.39□□□□□ -1.07
TRS23YDR246W RPN1P38764 993 aaKnown RBP8.38□□□□□ -1.07
TRS23YDR246W GYP1Q08484 637 aa8.38□□□□□ -1.07
TRS23YDR246W BUD20Q08004 166 aaPredicted RBP8.37□□□□□ -1.07
TRS23YDR246W SPA2P23201 1466 aaKnown RBP8.37□□□□□ -1.07
TRS23YDR246W NIS1P53939 407 aa8.35□□□□□ -1.07
TRS23YDR246W PRT1P06103 763 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms