RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C ATF2P53296 535 aa2.9□□□□□ -1.94
MSH6YDR097C IES2P40154 320 aa2.89□□□□□ -1.95
MSH6YDR097C GEA2P39993 1459 aaKnown RBP2.89□□□□□ -1.95
MSH6YDR097C PIB1Q06651 286 aa2.88□□□□□ -1.95
MSH6YDR097C SIN3P22579 1536 aa2.88□□□□□ -1.95
MSH6YDR097C PSD2P53037 1138 aaKnown RBP2.88□□□□□ -1.95
MSH6YDR097C PBS2P08018 668 aa2.88□□□□□ -1.95
MSH6YDR097C TIF4632P39936 914 aaKnown RBP2.88□□□□□ -1.95
MSH6YDR097C YJL007CP47080 104 aa2.87□□□□□ -1.95
MSH6YDR097C TY1B-BRQ12193 1756 aa2.87□□□□□ -1.95
MSH6YDR097C TY1B-GR3Q12316 1755 aa2.87□□□□□ -1.95
MSH6YDR097C TY1B-ORQ92393 1755 aa2.87□□□□□ -1.95
MSH6YDR097C UBP10P53874 792 aaPredicted RBP2.87□□□□□ -1.95
MSH6YDR097C HGH1P48362 394 aaKnown RBP2.86□□□□□ -1.95
MSH6YDR097C GUA1P38625 525 aaKnown RBP2.85□□□□□ -1.95
MSH6YDR097C RPL34BP40525 121 aaKnown RBP2.85□□□□□ -1.95
MSH6YDR097C CKB1P43639 278 aa2.85□□□□□ -1.95
MSH6YDR097C BDF1P35817 686 aa2.85□□□□□ -1.95
MSH6YDR097C DIT2P21595 489 aa2.85□□□□□ -1.95
MSH6YDR097C BUD31P25337 157 aaPredicted RBP2.85□□□□□ -1.95
MSH6YDR097C YML020WQ03722 664 aa2.84□□□□□ -1.95
MSH6YDR097C MAM3Q12296 706 aa2.84□□□□□ -1.95
MSH6YDR097C ECM5Q03214 1411 aa2.83□□□□□ -1.96
MSH6YDR097C EPS1P40557 701 aa2.83□□□□□ -1.96
MSH6YDR097C PKC1P24583 1151 aa2.83□□□□□ -1.96
MSH6YDR097C TFB3Q03290 321 aa2.83□□□□□ -1.96
MSH6YDR097C NOP53Q12080 455 aaKnown RBP2.83□□□□□ -1.96
MSH6YDR097C SPT6P23615 1451 aaKnown RBP2.82□□□□□ -1.96
MSH6YDR097C DOP1Q03921 1698 aa2.82□□□□□ -1.96
MSH6YDR097C ESP1Q03018 1630 aa2.82□□□□□ -1.96
MSH6YDR097C UBP9P39967 754 aa2.82□□□□□ -1.96
MSH6YDR097C WSC3Q12215 556 aa2.82□□□□□ -1.96
MSH6YDR097C YPR204WQ08995 1032 aa2.81□□□□□ -1.96
MSH6YDR097C VHR2P40041 505 aa2.8□□□□□ -1.96
MSH6YDR097C SLX8P40072 274 aa2.8□□□□□ -1.96
MSH6YDR097C YRF1-1P0CX20 1796 aa2.8□□□□□ -1.96
MSH6YDR097C YRF1-5P0CX21 1796 aa2.8□□□□□ -1.96
MSH6YDR097C YRF1-8P0CX22 1796 aa2.8□□□□□ -1.96
MSH6YDR097C COQ8P27697 501 aa2.8□□□□□ -1.96
MSH6YDR097C RTG3P38165 486 aa2.8□□□□□ -1.96
MSH6YDR097C HAP1P0CE41 1502 aa2.8□□□□□ -1.96
MSH6YDR097C ERG12P07277 443 aa2.8□□□□□ -1.96
MSH6YDR097C BRL1P38770 471 aa2.79□□□□□ -1.96
MSH6YDR097C TYW1Q08960 810 aaKnown RBP2.79□□□□□ -1.96
MSH6YDR097C CPS1P27614 576 aa2.79□□□□□ -1.96
MSH6YDR097C RPL34AP87262 121 aaPredicted RBP2.78□□□□□ -1.96
MSH6YDR097C SGS1P35187 1447 aa2.78□□□□□ -1.96
MSH6YDR097C DSF2P38213 736 aa2.78□□□□□ -1.96
MSH6YDR097C BIM1P40013 344 aa2.78□□□□□ -1.97
MSH6YDR097C KTR7P40504 517 aa2.78□□□□□ -1.97
MSH6YDR097C REF2P42073 533 aaPredicted RBP2.77□□□□□ -1.97
MSH6YDR097C YNR021WP53723 404 aaKnown RBP2.77□□□□□ -1.97
MSH6YDR097C KIC1P38692 1080 aa2.77□□□□□ -1.97
MSH6YDR097C MMS1Q06211 1407 aa2.77□□□□□ -1.97
MSH6YDR097C ATG32P40458 529 aa2.76□□□□□ -1.97
MSH6YDR097C YBL029C-AQ3E756 94 aa2.76□□□□□ -1.97
MSH6YDR097C AIM44Q99299 758 aa2.76□□□□□ -1.97
MSH6YDR097C SSA1P10591 642 aaKnown RBP2.76□□□□□ -1.97
MSH6YDR097C IFH1P39520 1085 aa2.76□□□□□ -1.97
MSH6YDR097C SPO14P36126 1683 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-HO13535 1793 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-DR5P0C2I2 1755 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-DR6P0C2I3 1755 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-LR2P0C2I5 1755 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-LR3P0C2I6 1755 aaKnown RBP2.75□□□□□ -1.97
MSH6YDR097C TY1B-PR1P0C2I9 1755 aaKnown RBP2.75□□□□□ -1.97
MSH6YDR097C TY1B-PR2P0C2J0 1756 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-PR3P0C2J1 1755 aaKnown RBP2.75□□□□□ -1.97
MSH6YDR097C TY1B-JR1P47098 1755 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-ML2Q03434 1755 aaKnown RBP2.75□□□□□ -1.97
MSH6YDR097C TY1B-ER1Q03612 1755 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-ML1Q04711 1755 aaKnown RBP2.75□□□□□ -1.97
MSH6YDR097C TY1B-GR2Q12269 1755 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-OLQ12273 1755 aa2.75□□□□□ -1.97
MSH6YDR097C TY1B-PLQ12414 1755 aaKnown RBP2.75□□□□□ -1.97
MSH6YDR097C DBP1P24784 617 aaKnown RBP2.75□□□□□ -1.97
MSH6YDR097C NSR1P27476 414 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
MSH6YDR097C YBL036CP38197 257 aa2.75□□□□□ -1.97
MSH6YDR097C CSN12P47130 423 aa2.75□□□□□ -1.97
MSH6YDR097C NOP7P53261 605 aaKnown RBP2.75□□□□□ -1.97
MSH6YDR097C YNL108CP53929 270 aa2.75□□□□□ -1.97
MSH6YDR097C YRF1-2P40105 1681 aa2.74□□□□□ -1.97
MSH6YDR097C MET10P39692 1035 aa2.74□□□□□ -1.97
MSH6YDR097C GTT3P39996 337 aa2.74□□□□□ -1.97
MSH6YDR097C MAK11P20484 414 aaKnown RBP2.74□□□□□ -1.97
MSH6YDR097C YMR196WQ04336 1088 aa2.74□□□□□ -1.97
MSH6YDR097C RPO21P04050 1733 aaKnown RBP2.74□□□□□ -1.97
MSH6YDR097C EDS1P38073 919 aa2.73□□□□□ -1.97
MSH6YDR097C SUB2Q07478 446 aaKnown RBP2.73□□□□□ -1.97
MSH6YDR097C GEF1P37020 779 aa2.73□□□□□ -1.97
MSH6YDR097C DNF3Q12674 1656 aa2.73□□□□□ -1.97
MSH6YDR097C VPS15P22219 1454 aa2.72□□□□□ -1.97
MSH6YDR097C RTG2P32608 588 aaKnown RBP2.72□□□□□ -1.97
MSH6YDR097C THI12P42883 340 aa2.72□□□□□ -1.97
MSH6YDR097C THI5P43534 340 aa2.72□□□□□ -1.97
MSH6YDR097C THI11P47183 340 aa2.72□□□□□ -1.97
MSH6YDR097C THI13Q07748 340 aa2.72□□□□□ -1.97
MSH6YDR097C AIM7Q12156 149 aa2.72□□□□□ -1.97
MSH6YDR097C HAT1Q12341 374 aa2.72□□□□□ -1.97
MSH6YDR097C CHC1P22137 1653 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms