RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C JIP4Q03361 876 aa8.12□□□□□ -1.11
RXT3YDL076C VRP1P37370 817 aa8.05□□□□□ -1.12
RXT3YDL076C RTG3P38165 486 aa8.05□□□□□ -1.12
RXT3YDL076C SPA2P23201 1466 aaKnown RBP8.04□□□□□ -1.12
RXT3YDL076C XDJ1P39102 459 aa8.03□□□□□ -1.12
RXT3YDL076C GYP5Q12344 894 aa8.03□□□□□ -1.12
RXT3YDL076C HTA1P04911 132 aaKnown RBP8.02□□□□□ -1.13
RXT3YDL076C HTA2P04912 132 aa8.02□□□□□ -1.13
RXT3YDL076C SPT6P23615 1451 aaKnown RBP8.01□□□□□ -1.13
RXT3YDL076C ABP1P15891 592 aaKnown RBP8.01□□□□□ -1.13
RXT3YDL076C DCW1P36091 449 aa8.01□□□□□ -1.13
RXT3YDL076C PTC4P38089 393 aa7.99□□□□□ -1.13
RXT3YDL076C YEL023CP39992 682 aa7.99□□□□□ -1.13
RXT3YDL076C DPS1P04802 557 aaKnown RBP7.97□□□□□ -1.13
RXT3YDL076C CST9Q06032 482 aa7.97□□□□□ -1.13
RXT3YDL076C HSL1P34244 1518 aa7.97□□□□□ -1.13
RXT3YDL076C YDR344CQ05510 147 aa7.96□□□□□ -1.14
RXT3YDL076C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
RXT3YDL076C RGA2Q06407 1009 aa7.95□□□□□ -1.14
RXT3YDL076C ELP4Q02884 456 aaKnown RBP7.92□□□□□ -1.14
RXT3YDL076C RCR1P38212 213 aa7.9□□□□□ -1.14
RXT3YDL076C PML39Q03760 334 aa7.88□□□□□ -1.15
RXT3YDL076C ECM5Q03214 1411 aa7.86□□□□□ -1.15
RXT3YDL076C SSP1P38871 571 aa7.86□□□□□ -1.15
RXT3YDL076C DMA1P38823 416 aa7.82□□□□□ -1.16
RXT3YDL076C MGA2P40578 1113 aa7.82□□□□□ -1.16
RXT3YDL076C BUD4P47136 1447 aa7.82□□□□□ -1.16
RXT3YDL076C HIR3P47171 1648 aa7.8□□□□□ -1.16
RXT3YDL076C THO2P53552 1597 aaKnown RBP7.8□□□□□ -1.16
RXT3YDL076C RGA1P39083 1007 aa7.77□□□□□ -1.17
RXT3YDL076C SRC1Q03707 834 aa7.77□□□□□ -1.17
RXT3YDL076C ARH1P48360 493 aa7.74□□□□□ -1.17
RXT3YDL076C GRE2Q12068 342 aaKnown RBP7.74□□□□□ -1.17
RXT3YDL076C MID1P41821 548 aa7.71□□□□□ -1.18
RXT3YDL076C XRN1P22147 1528 aaKnown RBP7.7□□□□□ -1.18
RXT3YDL076C MDS3P53094 1487 aa7.69□□□□□ -1.18
RXT3YDL076C SPT23P35210 1082 aa7.67□□□□□ -1.18
RXT3YDL076C PEX29Q03370 554 aa7.66□□□□□ -1.18
RXT3YDL076C ATH1P48016 1211 aa7.64□□□□□ -1.19
RXT3YDL076C MIF2P35201 549 aa7.6□□□□□ -1.19
RXT3YDL076C GUT1P32190 709 aa7.58□□□□□ -1.2
RXT3YDL076C HAP5Q02516 242 aa7.58□□□□□ -1.2
RXT3YDL076C REV3P14284 1504 aa7.57□□□□□ -1.2
RXT3YDL076C PEP1P32319 1579 aa7.55□□□□□ -1.2
RXT3YDL076C BPT1P14772 1559 aa7.54□□□□□ -1.2
RXT3YDL076C PTC2P39966 464 aaKnown RBP7.54□□□□□ -1.2
RXT3YDL076C BNI4P53858 892 aa7.53□□□□□ -1.2
RXT3YDL076C NST1P53935 1240 aa7.53□□□□□ -1.2
RXT3YDL076C PTC3P34221 468 aaKnown RBP7.52□□□□□ -1.21
RXT3YDL076C SKI3P17883 1432 aaKnown RBP7.52□□□□□ -1.21
RXT3YDL076C ATG2P53855 1592 aa7.51□□□□□ -1.21
RXT3YDL076C YML082WQ04533 649 aaKnown RBP7.51□□□□□ -1.21
RXT3YDL076C SSN2P38931 1420 aa7.51□□□□□ -1.21
RXT3YDL076C RAS1P01119 309 aa7.5□□□□□ -1.21
RXT3YDL076C EDS1P38073 919 aa7.5□□□□□ -1.21
RXT3YDL076C TAF2P23255 1407 aa7.48□□□□□ -1.21
RXT3YDL076C SOL3P38858 249 aa7.48□□□□□ -1.21
RXT3YDL076C AI4P03878 556 aa7.47□□□□□ -1.21
RXT3YDL076C MPH3P0CE00 602 aa7.47□□□□□ -1.21
RXT3YDL076C ILV3P39522 585 aaKnown RBP7.45□□□□□ -1.22
RXT3YDL076C MPC54Q08550 464 aa7.44□□□□□ -1.22
RXT3YDL076C MAK11P20484 414 aaKnown RBP7.43□□□□□ -1.22
RXT3YDL076C SIN3P22579 1536 aa7.42□□□□□ -1.22
RXT3YDL076C SSK2P53599 1579 aa7.42□□□□□ -1.22
RXT3YDL076C YCF1P39109 1515 aaKnown RBP7.4□□□□□ -1.22
RXT3YDL076C TRK1P12685 1235 aa7.39□□□□□ -1.23
RXT3YDL076C NMA111P53920 997 aa7.38□□□□□ -1.23
RXT3YDL076C TAF7Q05021 590 aa7.36□□□□□ -1.23
RXT3YDL076C COQ8P27697 501 aa7.35□□□□□ -1.23
RXT3YDL076C ESP1Q03018 1630 aa7.34□□□□□ -1.23
RXT3YDL076C RAM2P29703 316 aa7.34□□□□□ -1.23
RXT3YDL076C YPR015CQ12531 247 aa7.34□□□□□ -1.23
RXT3YDL076C UFD4P33202 1483 aa7.33□□□□□ -1.24
RXT3YDL076C MYO2P19524 1574 aaKnown RBP7.33□□□□□ -1.24
RXT3YDL076C AMS1P22855 1083 aa7.31□□□□□ -1.24
RXT3YDL076C GYP1Q08484 637 aa7.3□□□□□ -1.24
RXT3YDL076C LEO1P38439 464 aa7.29□□□□□ -1.24
RXT3YDL076C DPL1Q05567 589 aa7.29□□□□□ -1.24
RXT3YDL076C YGR273CP53329 174 aa7.28□□□□□ -1.24
RXT3YDL076C YPK9Q12697 1472 aa7.28□□□□□ -1.24
RXT3YDL076C SLI15P38283 698 aa7.27□□□□□ -1.25
RXT3YDL076C YPL062WQ02781 134 aa7.27□□□□□ -1.25
RXT3YDL076C MET5P47169 1442 aa7.25□□□□□ -1.25
RXT3YDL076C SCC2Q04002 1493 aa7.24□□□□□ -1.25
RXT3YDL076C RAM1P22007 431 aa7.24□□□□□ -1.25
RXT3YDL076C SAS10Q12136 610 aaPredicted RBP7.23□□□□□ -1.25
RXT3YDL076C CHD1P32657 1468 aa7.23□□□□□ -1.25
RXT3YDL076C RPO31P04051 1460 aa7.21□□□□□ -1.26
RXT3YDL076C CDC25P04821 1589 aa7.2□□□□□ -1.26
RXT3YDL076C LTE1P07866 1435 aa7.2□□□□□ -1.26
RXT3YDL076C ESC1Q03661 1658 aaKnown RBP7.19□□□□□ -1.26
RXT3YDL076C LEU3P08638 886 aa7.18□□□□□ -1.26
RXT3YDL076C ISU2Q12056 156 aa7.18□□□□□ -1.26
RXT3YDL076C SDH2P21801 266 aa7.17□□□□□ -1.26
RXT3YDL076C PAN1P32521 1480 aa7.17□□□□□ -1.26
RXT3YDL076C RKR1Q04781 1562 aa7.14□□□□□ -1.27
RXT3YDL076C YEL077CQ3E7X8 1277 aa7.14□□□□□ -1.27
RXT3YDL076C GEA2P39993 1459 aaKnown RBP7.13□□□□□ -1.27
RXT3YDL076C TOP2P06786 1428 aaKnown RBP7.13□□□□□ -1.27
RXT3YDL076C PDR1P12383 1068 aa7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms