RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W TFG1P41895 735 aaPredicted RBP6.94□□□□□ -1.3
TSR1YDL060W YNL035CP53962 389 aaKnown RBP6.94□□□□□ -1.3
TSR1YDL060W RTG1P32607 177 aa6.93□□□□□ -1.3
TSR1YDL060W IFH1P39520 1085 aa6.93□□□□□ -1.3
TSR1YDL060W YJL171CP46992 396 aa6.93□□□□□ -1.3
TSR1YDL060W JIP4Q03361 876 aa6.93□□□□□ -1.3
TSR1YDL060W YEL023CP39992 682 aa6.91□□□□□ -1.3
TSR1YDL060W PTC4P38089 393 aa6.9□□□□□ -1.31
TSR1YDL060W NCR1Q12200 1170 aa6.9□□□□□ -1.31
TSR1YDL060W FKH1P40466 484 aa6.89□□□□□ -1.31
TSR1YDL060W SEC61P32915 480 aa6.89□□□□□ -1.31
TSR1YDL060W AIR2Q12476 344 aaKnown RBP6.87□□□□□ -1.31
TSR1YDL060W TAF7Q05021 590 aa6.84□□□□□ -1.31
TSR1YDL060W VPS70P47161 811 aa6.83□□□□□ -1.32
TSR1YDL060W DAN4P47179 1161 aa6.83□□□□□ -1.32
TSR1YDL060W BMT6Q12291 365 aa6.83□□□□□ -1.32
TSR1YDL060W YGR273CP53329 174 aa6.82□□□□□ -1.32
TSR1YDL060W SOL3P38858 249 aa6.8□□□□□ -1.32
TSR1YDL060W YPR148CQ06523 435 aa6.79□□□□□ -1.32
TSR1YDL060W MPH3P0CE00 602 aa6.79□□□□□ -1.32
TSR1YDL060W YDL129WQ07555 291 aa6.79□□□□□ -1.32
TSR1YDL060W AI4P03878 556 aa6.78□□□□□ -1.32
TSR1YDL060W PML39Q03760 334 aa6.77□□□□□ -1.32
TSR1YDL060W SAP30P38429 201 aa6.77□□□□□ -1.33
TSR1YDL060W VHR2P40041 505 aa6.75□□□□□ -1.33
TSR1YDL060W CKB1P43639 278 aa6.75□□□□□ -1.33
TSR1YDL060W REF2P42073 533 aaPredicted RBP6.75□□□□□ -1.33
TSR1YDL060W NST1P53935 1240 aa6.75□□□□□ -1.33
TSR1YDL060W PEX29Q03370 554 aa6.74□□□□□ -1.33
TSR1YDL060W KIC1P38692 1080 aa6.73□□□□□ -1.33
TSR1YDL060W KEX1P09620 729 aa6.73□□□□□ -1.33
TSR1YDL060W SAS10Q12136 610 aaPredicted RBP6.72□□□□□ -1.33
TSR1YDL060W RAD54P32863 898 aa6.71□□□□□ -1.34
TSR1YDL060W UBP14P38237 781 aaKnown RBP6.7□□□□□ -1.34
TSR1YDL060W MID1P41821 548 aa6.69□□□□□ -1.34
TSR1YDL060W YLR326WQ06170 240 aaKnown RBP6.69□□□□□ -1.34
TSR1YDL060W ILV3P39522 585 aaKnown RBP6.69□□□□□ -1.34
TSR1YDL060W RPP1BP10622 106 aaKnown RBP6.68□□□□□ -1.34
TSR1YDL060W SPB4P25808 606 aaPredicted RBP6.67□□□□□ -1.34
TSR1YDL060W ELP4Q02884 456 aaKnown RBP6.67□□□□□ -1.34
TSR1YDL060W SLI15P38283 698 aa6.66□□□□□ -1.34
TSR1YDL060W MAK21Q12176 1025 aaKnown RBP6.66□□□□□ -1.34
TSR1YDL060W PBS2P08018 668 aa6.65□□□□□ -1.35
TSR1YDL060W PCS60P38137 543 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
TSR1YDL060W COX6P00427 148 aa6.62□□□□□ -1.35
TSR1YDL060W CHL1P22516 861 aaPredicted RBP6.62□□□□□ -1.35
TSR1YDL060W PRE3P38624 215 aa6.62□□□□□ -1.35
TSR1YDL060W YDR090CQ03193 310 aa6.61□□□□□ -1.35
TSR1YDL060W DPL1Q05567 589 aa6.61□□□□□ -1.35
TSR1YDL060W MPC54Q08550 464 aa6.61□□□□□ -1.35
TSR1YDL060W ARH1P48360 493 aa6.6□□□□□ -1.35
TSR1YDL060W NMA111P53920 997 aa6.59□□□□□ -1.35
TSR1YDL060W HAP5Q02516 242 aa6.59□□□□□ -1.35
TSR1YDL060W MAM3Q12296 706 aa6.58□□□□□ -1.36
TSR1YDL060W PEX21P50091 288 aa6.58□□□□□ -1.36
TSR1YDL060W CDC73Q06697 393 aa6.58□□□□□ -1.36
TSR1YDL060W ISU2Q12056 156 aa6.57□□□□□ -1.36
TSR1YDL060W SPT23P35210 1082 aa6.56□□□□□ -1.36
TSR1YDL060W DSF2P38213 736 aa6.54□□□□□ -1.36
TSR1YDL060W YDR344CQ05510 147 aa6.53□□□□□ -1.36
TSR1YDL060W PTC2P39966 464 aaKnown RBP6.52□□□□□ -1.37
TSR1YDL060W CSC1Q06538 782 aa6.52□□□□□ -1.37
TSR1YDL060W BNI4P53858 892 aa6.51□□□□□ -1.37
TSR1YDL060W IES2P40154 320 aa6.51□□□□□ -1.37
TSR1YDL060W BCK2P33306 851 aa6.5□□□□□ -1.37
TSR1YDL060W TFB4Q12004 338 aa6.49□□□□□ -1.37
TSR1YDL060W ORC6P38826 435 aa6.48□□□□□ -1.37
TSR1YDL060W VRP1P37370 817 aa6.47□□□□□ -1.37
TSR1YDL060W TUM1Q08686 304 aaKnown RBP6.46□□□□□ -1.37
TSR1YDL060W YRR1Q12172 810 aa6.46□□□□□ -1.37
TSR1YDL060W PSE1P32337 1089 aaKnown RBP6.45□□□□□ -1.38
TSR1YDL060W MVP1P40959 511 aaKnown RBP6.44□□□□□ -1.38
TSR1YDL060W YML082WQ04533 649 aaKnown RBP6.44□□□□□ -1.38
TSR1YDL060W GAP1P19145 602 aaPredicted RBP6.43□□□□□ -1.38
TSR1YDL060W RGR1P19263 1082 aa6.43□□□□□ -1.38
TSR1YDL060W NPL4P33755 580 aa6.43□□□□□ -1.38
TSR1YDL060W YPR109WQ06104 294 aa6.43□□□□□ -1.38
TSR1YDL060W PDR1P12383 1068 aa6.42□□□□□ -1.38
TSR1YDL060W DIT2P21595 489 aa6.42□□□□□ -1.38
TSR1YDL060W NUP42P49686 430 aaKnown RBP6.42□□□□□ -1.38
TSR1YDL060W ATF2P53296 535 aa6.4□□□□□ -1.39
TSR1YDL060W CLB5P30283 435 aa6.39□□□□□ -1.39
TSR1YDL060W LEO1P38439 464 aa6.39□□□□□ -1.39
TSR1YDL060W GYP1Q08484 637 aa6.38□□□□□ -1.39
TSR1YDL060W NUD1P32336 851 aa6.37□□□□□ -1.39
TSR1YDL060W XDJ1P39102 459 aa6.37□□□□□ -1.39
TSR1YDL060W TEA1P47988 759 aa6.37□□□□□ -1.39
TSR1YDL060W YNR021WP53723 404 aaKnown RBP6.37□□□□□ -1.39
TSR1YDL060W LEU3P08638 886 aa6.36□□□□□ -1.39
TSR1YDL060W RAM1P22007 431 aa6.35□□□□□ -1.39
TSR1YDL060W GCD11P32481 527 aaKnown RBP6.33□□□□□ -1.4
TSR1YDL060W GLC3P32775 704 aa6.33□□□□□ -1.4
TSR1YDL060W YPR015CQ12531 247 aa6.33□□□□□ -1.4
TSR1YDL060W SAS4Q04003 481 aa6.32□□□□□ -1.4
TSR1YDL060W ISM1P48526 1002 aa6.31□□□□□ -1.4
TSR1YDL060W PRT1P06103 763 aaKnown RBP6.31□□□□□ -1.4
TSR1YDL060W STR2P47164 639 aa6.3□□□□□ -1.4
TSR1YDL060W BUD20Q08004 166 aaPredicted RBP6.3□□□□□ -1.4
TSR1YDL060W YMR196WQ04336 1088 aa6.3□□□□□ -1.4
TSR1YDL060W RPN1P38764 993 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms