RNA–Protein interactions for RNA: YBR188C

NTC20, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene NTC20, Length 423 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTC20	YBR188C	IES2	P40154	320 aa		5.27	□□□□□ -1.57
NTC20	YBR188C	NUP42	P49686	430 aa	Known RBP	5.27	□□□□□ -1.57
NTC20	YBR188C	KIN1	P13185	1064 aa		5.26	□□□□□ -1.57
NTC20	YBR188C	DIT2	P21595	489 aa		5.26	□□□□□ -1.57
NTC20	YBR188C	ABP1	P15891	592 aa	Known RBP	5.25	□□□□□ -1.57
NTC20	YBR188C	UBP14	P38237	781 aa	Known RBP	5.25	□□□□□ -1.57
NTC20	YBR188C	GTT3	P39996	337 aa		5.25	□□□□□ -1.57
NTC20	YBR188C	GYP5	Q12344	894 aa		5.25	□□□□□ -1.57
NTC20	YBR188C	HGH1	P48362	394 aa	Known RBP	5.24	□□□□□ -1.57
NTC20	YBR188C	YGR273C	P53329	174 aa		5.24	□□□□□ -1.57
NTC20	YBR188C	GLC3	P32775	704 aa		5.23	□□□□□ -1.57
NTC20	YBR188C	KIC1	P38692	1080 aa		5.23	□□□□□ -1.57
NTC20	YBR188C	VHR2	P40041	505 aa		5.23	□□□□□ -1.57
NTC20	YBR188C	ATF2	P53296	535 aa		5.23	□□□□□ -1.57
NTC20	YBR188C	YDR090C	Q03193	310 aa		5.23	□□□□□ -1.57
NTC20	YBR188C	YLR326W	Q06170	240 aa	Known RBP	5.22	□□□□□ -1.57
NTC20	YBR188C	YJL171C	P46992	396 aa		5.21	□□□□□ -1.58
NTC20	YBR188C	YBL029C-A	Q3E756	94 aa		5.2	□□□□□ -1.58
NTC20	YBR188C	KEX1	P09620	729 aa		5.19	□□□□□ -1.58
NTC20	YBR188C	RAD54	P32863	898 aa		5.19	□□□□□ -1.58
NTC20	YBR188C	MSB4	Q12317	492 aa		5.19	□□□□□ -1.58
NTC20	YBR188C	PSE1	P32337	1089 aa	Known RBP	5.18	□□□□□ -1.58
NTC20	YBR188C	SOL3	P38858	249 aa		5.18	□□□□□ -1.58
NTC20	YBR188C	YOL036W	Q08206	761 aa		5.18	□□□□□ -1.58
NTC20	YBR188C	AIR2	Q12476	344 aa	Known RBP	5.18	□□□□□ -1.58
NTC20	YBR188C	HTA1	P04911	132 aa	Known RBP	5.17	□□□□□ -1.58
NTC20	YBR188C	HTA2	P04912	132 aa		5.17	□□□□□ -1.58
NTC20	YBR188C	DCW1	P36091	449 aa		5.17	□□□□□ -1.58
NTC20	YBR188C	RLF2	Q12495	606 aa		5.17	□□□□□ -1.58
NTC20	YBR188C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
NTC20	YBR188C	VNX1	P42839	908 aa		5.16	□□□□□ -1.58
NTC20	YBR188C	SET4	P42948	560 aa		5.16	□□□□□ -1.58
NTC20	YBR188C	AI4	P03878	556 aa		5.15	□□□□□ -1.59
NTC20	YBR188C	MPH3	P0CE00	602 aa		5.15	□□□□□ -1.59
NTC20	YBR188C	NST1	P53935	1240 aa		5.15	□□□□□ -1.59
NTC20	YBR188C	HPC2	Q01448	625 aa		5.15	□□□□□ -1.59
NTC20	YBR188C	EAP1	P36041	632 aa	Known RBP	5.14	□□□□□ -1.59
NTC20	YBR188C	GUA1	P38625	525 aa	Known RBP	5.14	□□□□□ -1.59
NTC20	YBR188C	FKH1	P40466	484 aa		5.14	□□□□□ -1.59
NTC20	YBR188C	RPP1B	P10622	106 aa	Known RBP	5.12	□□□□□ -1.59
NTC20	YBR188C	SSA2	P10592	639 aa	Known RBP	5.11	□□□□□ -1.59
NTC20	YBR188C	PTC4	P38089	393 aa		5.11	□□□□□ -1.59
NTC20	YBR188C	ORC6	P38826	435 aa		5.11	□□□□□ -1.59
NTC20	YBR188C	RGA2	Q06407	1009 aa		5.11	□□□□□ -1.59
NTC20	YBR188C	CLB5	P30283	435 aa		5.1	□□□□□ -1.59
NTC20	YBR188C	YEL023C	P39992	682 aa		5.1	□□□□□ -1.59
NTC20	YBR188C	DAN4	P47179	1161 aa		5.1	□□□□□ -1.59
NTC20	YBR188C	TEA1	P47988	759 aa		5.1	□□□□□ -1.59
NTC20	YBR188C	SPP1	Q03012	353 aa		5.1	□□□□□ -1.59
NTC20	YBR188C	JIP4	Q03361	876 aa		5.09	□□□□□ -1.59
NTC20	YBR188C	WSC3	Q12215	556 aa		5.09	□□□□□ -1.59
NTC20	YBR188C	RGR1	P19263	1082 aa		5.08	□□□□□ -1.6
NTC20	YBR188C	BRL1	P38770	471 aa		5.08	□□□□□ -1.6
NTC20	YBR188C	CSN12	P47130	423 aa		5.08	□□□□□ -1.6
NTC20	YBR188C	CSC1	Q06538	782 aa		5.08	□□□□□ -1.6
NTC20	YBR188C	SLI15	P38283	698 aa		5.07	□□□□□ -1.6
NTC20	YBR188C	MVP1	P40959	511 aa	Known RBP	5.07	□□□□□ -1.6
NTC20	YBR188C	TRP5	P00931	707 aa	Known RBP	5.06	□□□□□ -1.6
NTC20	YBR188C	GAP1	P19145	602 aa	Predicted RBP	5.06	□□□□□ -1.6
NTC20	YBR188C	ILV3	P39522	585 aa	Known RBP	5.06	□□□□□ -1.6
NTC20	YBR188C	TFB3	Q03290	321 aa		5.06	□□□□□ -1.6
NTC20	YBR188C	TIF11	P38912	153 aa	Known RBP	5.05	□□□□□ -1.6
NTC20	YBR188C	TFB4	Q12004	338 aa		5.05	□□□□□ -1.6
NTC20	YBR188C	ULI1	P43604	169 aa		5.04	□□□□□ -1.6
NTC20	YBR188C	BMT6	Q12291	365 aa		5.04	□□□□□ -1.6
NTC20	YBR188C	PEX21	P50091	288 aa		5.02	□□□□□ -1.61
NTC20	YBR188C	YPR109W	Q06104	294 aa		5.02	□□□□□ -1.61
NTC20	YBR188C	YNL035C	P53962	389 aa	Known RBP	5.01	□□□□□ -1.61
NTC20	YBR188C	GLN1	P32288	370 aa	Known RBP	5	□□□□□ -1.61
NTC20	YBR188C	HST2	P53686	357 aa		5	□□□□□ -1.61
NTC20	YBR188C	CDC73	Q06697	393 aa		5	□□□□□ -1.61
NTC20	YBR188C	IOC2	Q12072	812 aa		5	□□□□□ -1.61
NTC20	YBR188C	KTR1	P27810	393 aa	Known RBP	4.99	□□□□□ -1.61
NTC20	YBR188C	FPK1	P53739	893 aa		4.99	□□□□□ -1.61
NTC20	YBR188C	NIS1	P53939	407 aa		4.99	□□□□□ -1.61
NTC20	YBR188C	YMR196W	Q04336	1088 aa		4.99	□□□□□ -1.61
NTC20	YBR188C	DPL1	Q05567	589 aa		4.99	□□□□□ -1.61
NTC20	YBR188C	SIT4	P20604	311 aa		4.98	□□□□□ -1.61
NTC20	YBR188C	PKC1	P24583	1151 aa		4.98	□□□□□ -1.61
NTC20	YBR188C	SEC61	P32915	480 aa		4.98	□□□□□ -1.61
NTC20	YBR188C	TUM1	Q08686	304 aa	Known RBP	4.98	□□□□□ -1.61
NTC20	YBR188C	TYW1	Q08960	810 aa	Known RBP	4.98	□□□□□ -1.61
NTC20	YBR188C	CSE4	P36012	229 aa		4.97	□□□□□ -1.61
NTC20	YBR188C	PML39	Q03760	334 aa		4.97	□□□□□ -1.61
NTC20	YBR188C	ISU2	Q12056	156 aa		4.97	□□□□□ -1.61
NTC20	YBR188C	MMP1	Q12372	583 aa		4.97	□□□□□ -1.61
NTC20	YBR188C	TFG1	P41895	735 aa	Predicted RBP	4.96	□□□□□ -1.62
NTC20	YBR188C	MPC54	Q08550	464 aa		4.96	□□□□□ -1.62
NTC20	YBR188C	RTG1	P32607	177 aa		4.95	□□□□□ -1.62
NTC20	YBR188C	YBL036C	P38197	257 aa		4.95	□□□□□ -1.62
NTC20	YBR188C	BIM1	P40013	344 aa		4.95	□□□□□ -1.62
NTC20	YBR188C	MID1	P41821	548 aa		4.95	□□□□□ -1.62
NTC20	YBR188C	YJL007C	P47080	104 aa		4.95	□□□□□ -1.62
NTC20	YBR188C	RTF1	P53064	558 aa		4.94	□□□□□ -1.62
NTC20	YBR188C	PEX29	Q03370	554 aa		4.94	□□□□□ -1.62
NTC20	YBR188C	YRR1	Q12172	810 aa		4.94	□□□□□ -1.62
NTC20	YBR188C	LDB19	Q12502	818 aa		4.94	□□□□□ -1.62
NTC20	YBR188C	RPL34B	P40525	121 aa	Known RBP	4.93	□□□□□ -1.62
NTC20	YBR188C	NMA111	P53920	997 aa		4.93	□□□□□ -1.62
NTC20	YBR188C	PKH3	Q03306	898 aa	Predicted RBP	4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms