RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	JIP4	Q03361	876 aa		8.91	□□□□□ -0.98
SMP1	YBR182C	MIF2	P35201	549 aa		8.89	□□□□□ -0.99
SMP1	YBR182C	DAN4	P47179	1161 aa		8.87	□□□□□ -0.99
SMP1	YBR182C	MAK11	P20484	414 aa	Known RBP	8.86	□□□□□ -0.99
SMP1	YBR182C	GRE2	Q12068	342 aa	Known RBP	8.85	□□□□□ -0.99
SMP1	YBR182C	PTC4	P38089	393 aa		8.84	□□□□□ -0.99
SMP1	YBR182C	YEL023C	P39992	682 aa		8.83	□□□□□ -1
SMP1	YBR182C	RAM2	P29703	316 aa		8.82	□□□□□ -1
SMP1	YBR182C	SAP30	P38429	201 aa		8.81	□□□□□ -1
SMP1	YBR182C	ATH1	P48016	1211 aa		8.81	□□□□□ -1
SMP1	YBR182C	YDL129W	Q07555	291 aa		8.8	□□□□□ -1
SMP1	YBR182C	PTC3	P34221	468 aa	Known RBP	8.75	□□□□□ -1.01
SMP1	YBR182C	GUT1	P32190	709 aa		8.74	□□□□□ -1.01
SMP1	YBR182C	COQ8	P27697	501 aa		8.73	□□□□□ -1.01
SMP1	YBR182C	EDS1	P38073	919 aa		8.73	□□□□□ -1.01
SMP1	YBR182C	CHL1	P22516	861 aa	Predicted RBP	8.69	□□□□□ -1.02
SMP1	YBR182C	PRE3	P38624	215 aa		8.67	□□□□□ -1.02
SMP1	YBR182C	PML39	Q03760	334 aa		8.66	□□□□□ -1.02
SMP1	YBR182C	BCK2	P33306	851 aa		8.64	□□□□□ -1.03
SMP1	YBR182C	NOP53	Q12080	455 aa	Known RBP	8.62	□□□□□ -1.03
SMP1	YBR182C	NST1	P53935	1240 aa		8.6	□□□□□ -1.03
SMP1	YBR182C	ELP4	Q02884	456 aa	Known RBP	8.6	□□□□□ -1.03
SMP1	YBR182C	PEX29	Q03370	554 aa		8.57	□□□□□ -1.04
SMP1	YBR182C	YDR344C	Q05510	147 aa		8.57	□□□□□ -1.04
SMP1	YBR182C	SOL3	P38858	249 aa		8.56	□□□□□ -1.04
SMP1	YBR182C	AI4	P03878	556 aa		8.53	□□□□□ -1.04
SMP1	YBR182C	MPH3	P0CE00	602 aa		8.53	□□□□□ -1.04
SMP1	YBR182C	MID1	P41821	548 aa		8.52	□□□□□ -1.05
SMP1	YBR182C	LEU3	P08638	886 aa		8.51	□□□□□ -1.05
SMP1	YBR182C	ARH1	P48360	493 aa		8.5	□□□□□ -1.05
SMP1	YBR182C	ILV3	P39522	585 aa	Known RBP	8.48	□□□□□ -1.05
SMP1	YBR182C	YGR273C	P53329	174 aa		8.48	□□□□□ -1.05
SMP1	YBR182C	VRP1	P37370	817 aa		8.48	□□□□□ -1.05
SMP1	YBR182C	SET1	P38827	1080 aa	Known RBP	8.46	□□□□□ -1.06
SMP1	YBR182C	XDJ1	P39102	459 aa		8.43	□□□□□ -1.06
SMP1	YBR182C	SAS10	Q12136	610 aa	Predicted RBP	8.43	□□□□□ -1.06
SMP1	YBR182C	SPT23	P35210	1082 aa		8.42	□□□□□ -1.06
SMP1	YBR182C	HAP5	Q02516	242 aa		8.41	□□□□□ -1.06
SMP1	YBR182C	MPC54	Q08550	464 aa		8.36	□□□□□ -1.07
SMP1	YBR182C	SLI15	P38283	698 aa		8.35	□□□□□ -1.07
SMP1	YBR182C	PTC2	P39966	464 aa	Known RBP	8.35	□□□□□ -1.07
SMP1	YBR182C	BNI4	P53858	892 aa		8.35	□□□□□ -1.07
SMP1	YBR182C	KEX1	P09620	729 aa		8.33	□□□□□ -1.08
SMP1	YBR182C	NMA111	P53920	997 aa		8.33	□□□□□ -1.08
SMP1	YBR182C	DPL1	Q05567	589 aa		8.33	□□□□□ -1.08
SMP1	YBR182C	IFH1	P39520	1085 aa		8.32	□□□□□ -1.08
SMP1	YBR182C	DPS1	P04802	557 aa	Known RBP	8.28	□□□□□ -1.08
SMP1	YBR182C	RPP1B	P10622	106 aa	Known RBP	8.28	□□□□□ -1.08
SMP1	YBR182C	VHR2	P40041	505 aa		8.28	□□□□□ -1.08
SMP1	YBR182C	YML082W	Q04533	649 aa	Known RBP	8.28	□□□□□ -1.08
SMP1	YBR182C	ISU2	Q12056	156 aa		8.25	□□□□□ -1.09
SMP1	YBR182C	RAD54	P32863	898 aa		8.24	□□□□□ -1.09
SMP1	YBR182C	KIC1	P38692	1080 aa		8.24	□□□□□ -1.09
SMP1	YBR182C	RPN1	P38764	993 aa	Known RBP	8.24	□□□□□ -1.09
SMP1	YBR182C	UBP14	P38237	781 aa	Known RBP	8.23	□□□□□ -1.09
SMP1	YBR182C	YLR326W	Q06170	240 aa	Known RBP	8.23	□□□□□ -1.09
SMP1	YBR182C	RGA2	Q06407	1009 aa		8.23	□□□□□ -1.09
SMP1	YBR182C	CDC73	Q06697	393 aa		8.21	□□□□□ -1.1
SMP1	YBR182C	DMA2	P53924	522 aa		8.2	□□□□□ -1.1
SMP1	YBR182C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	8.19	□□□□□ -1.1	not detected
SMP1	YBR182C	PEX21	P50091	288 aa		8.15	□□□□□ -1.1
SMP1	YBR182C	REF2	P42073	533 aa	Predicted RBP	8.14	□□□□□ -1.11
SMP1	YBR182C	GYP1	Q08484	637 aa		8.14	□□□□□ -1.11
SMP1	YBR182C	YPR015C	Q12531	247 aa		8.14	□□□□□ -1.11
SMP1	YBR182C	RAM1	P22007	431 aa		8.12	□□□□□ -1.11
SMP1	YBR182C	VPS70	P47161	811 aa		8.11	□□□□□ -1.11
SMP1	YBR182C	YPR148C	Q06523	435 aa		8.09	□□□□□ -1.12
SMP1	YBR182C	PDR1	P12383	1068 aa		8.07	□□□□□ -1.12
SMP1	YBR182C	YDR090C	Q03193	310 aa		8.07	□□□□□ -1.12
SMP1	YBR182C	RLF2	Q12495	606 aa		8.07	□□□□□ -1.12
SMP1	YBR182C	SRC1	Q03707	834 aa		8.06	□□□□□ -1.12
SMP1	YBR182C	SPB4	P25808	606 aa	Predicted RBP	8.04	□□□□□ -1.12
SMP1	YBR182C	SAS4	Q04003	481 aa		8.04	□□□□□ -1.12
SMP1	YBR182C	CSC1	Q06538	782 aa		8.03	□□□□□ -1.12
SMP1	YBR182C	YRR1	Q12172	810 aa		8.03	□□□□□ -1.12
SMP1	YBR182C	MAK21	Q12176	1025 aa	Known RBP	8.03	□□□□□ -1.12
SMP1	YBR182C	CKB1	P43639	278 aa		8.01	□□□□□ -1.13
SMP1	YBR182C	TFB4	Q12004	338 aa		8.01	□□□□□ -1.13
SMP1	YBR182C	RAS1	P01119	309 aa		8	□□□□□ -1.13
SMP1	YBR182C	COX6	P00427	148 aa		7.99	□□□□□ -1.13
SMP1	YBR182C	NPL4	P33755	580 aa		7.99	□□□□□ -1.13
SMP1	YBR182C	TUM1	Q08686	304 aa	Known RBP	7.99	□□□□□ -1.13
SMP1	YBR182C	MRF1	P30775	413 aa	Predicted RBP	7.98	□□□□□ -1.13
SMP1	YBR182C	AMS1	P22855	1083 aa		7.97	□□□□□ -1.13
SMP1	YBR182C	GAP1	P19145	602 aa	Predicted RBP	7.95	□□□□□ -1.14
SMP1	YBR182C	PRT1	P06103	763 aa	Known RBP	7.94	□□□□□ -1.14
SMP1	YBR182C	YEL077C	Q3E7X8	1277 aa		7.94	□□□□□ -1.14
SMP1	YBR182C	SDH2	P21801	266 aa		7.93	□□□□□ -1.14
SMP1	YBR182C	NUD1	P32336	851 aa		7.92	□□□□□ -1.14
SMP1	YBR182C	ORC6	P38826	435 aa		7.91	□□□□□ -1.14
SMP1	YBR182C	BUD20	Q08004	166 aa	Predicted RBP	7.91	□□□□□ -1.14
SMP1	YBR182C	ERG12	P07277	443 aa		7.89	□□□□□ -1.15
SMP1	YBR182C	PBS2	P08018	668 aa		7.89	□□□□□ -1.15
SMP1	YBR182C	GCD11	P32481	527 aa	Known RBP	7.89	□□□□□ -1.15
SMP1	YBR182C	MVP1	P40959	511 aa	Known RBP	7.89	□□□□□ -1.15
SMP1	YBR182C	STR2	P47164	639 aa		7.89	□□□□□ -1.15
SMP1	YBR182C	ISM1	P48526	1002 aa		7.87	□□□□□ -1.15
SMP1	YBR182C	YPR109W	Q06104	294 aa		7.86	□□□□□ -1.15
SMP1	YBR182C	TRK1	P12685	1235 aa		7.85	□□□□□ -1.15
SMP1	YBR182C	SPT16	P32558	1035 aa	Known RBP	7.85	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms