RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W DBP1P24784 617 aaKnown RBP5.78□□□□□ -1.48
PHO88YBR106W ATF2P53296 535 aa5.78□□□□□ -1.48
PHO88YBR106W YAP5P40574 245 aa5.76□□□□□ -1.49
PHO88YBR106W LDB19Q12502 818 aa5.75□□□□□ -1.49
PHO88YBR106W IES2P40154 320 aa5.74□□□□□ -1.49
PHO88YBR106W GLC3P32775 704 aa5.73□□□□□ -1.49
PHO88YBR106W PTC3P34221 468 aaKnown RBP5.73□□□□□ -1.49
PHO88YBR106W STS1P38637 319 aa5.72□□□□□ -1.49
PHO88YBR106W NUP42P49686 430 aaKnown RBP5.72□□□□□ -1.49
PHO88YBR106W HPC2Q01448 625 aa5.72□□□□□ -1.49
PHO88YBR106W DIT2P21595 489 aa5.71□□□□□ -1.5
PHO88YBR106W EDS1P38073 919 aa5.71□□□□□ -1.5
PHO88YBR106W KIC1P38692 1080 aa5.71□□□□□ -1.5
PHO88YBR106W GUT1P32190 709 aa5.69□□□□□ -1.5
PHO88YBR106W YFR006WP43590 535 aa5.69□□□□□ -1.5
PHO88YBR106W ATH1P48016 1211 aa5.69□□□□□ -1.5
PHO88YBR106W SSA2P10592 639 aaKnown RBP5.68□□□□□ -1.5
PHO88YBR106W GRE2Q12068 342 aaKnown RBP5.68□□□□□ -1.5
PHO88YBR106W IOC2Q12072 812 aa5.68□□□□□ -1.5
PHO88YBR106W GTT3P39996 337 aa5.67□□□□□ -1.5
PHO88YBR106W ULI1P43604 169 aa5.67□□□□□ -1.5
PHO88YBR106W BRL1P38770 471 aa5.66□□□□□ -1.5
PHO88YBR106W PSE1P32337 1089 aaKnown RBP5.65□□□□□ -1.5
PHO88YBR106W GUA1P38625 525 aaKnown RBP5.65□□□□□ -1.5
PHO88YBR106W ABP1P15891 592 aaKnown RBP5.64□□□□□ -1.51
PHO88YBR106W VMA1P17255 1071 aaKnown RBP5.64□□□□□ -1.51
PHO88YBR106W RPP1BP10622 106 aaKnown RBP5.62□□□□□ -1.51
PHO88YBR106W UBP14P38237 781 aaKnown RBP5.62□□□□□ -1.51
PHO88YBR106W RAD54P32863 898 aa5.61□□□□□ -1.51
PHO88YBR106W VHR2P40041 505 aa5.61□□□□□ -1.51
PHO88YBR106W SAM3Q08986 587 aa5.61□□□□□ -1.51
PHO88YBR106W CLB5P30283 435 aa5.6□□□□□ -1.51
PHO88YBR106W YGR273CP53329 174 aa5.6□□□□□ -1.51
PHO88YBR106W CSN12P47130 423 aa5.59□□□□□ -1.51
PHO88YBR106W YDR090CQ03193 310 aa5.59□□□□□ -1.51
PHO88YBR106W GYP5Q12344 894 aa5.59□□□□□ -1.51
PHO88YBR106W YLR326WQ06170 240 aaKnown RBP5.58□□□□□ -1.52
PHO88YBR106W TEA1P47988 759 aa5.57□□□□□ -1.52
PHO88YBR106W TFB3Q03290 321 aa5.56□□□□□ -1.52
PHO88YBR106W KEX1P09620 729 aa5.55□□□□□ -1.52
PHO88YBR106W PIB1Q06651 286 aa5.55□□□□□ -1.52
PHO88YBR106W RTG1P32607 177 aa5.54□□□□□ -1.52
PHO88YBR106W PCS60P38137 543 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
PHO88YBR106W RPL34BP40525 121 aaKnown RBP5.52□□□□□ -1.53
PHO88YBR106W RGA2Q06407 1009 aa5.52□□□□□ -1.53
PHO88YBR106W AI4P03878 556 aa5.51□□□□□ -1.53
PHO88YBR106W HTA1P04911 132 aaKnown RBP5.51□□□□□ -1.53
PHO88YBR106W HTA2P04912 132 aa5.51□□□□□ -1.53
PHO88YBR106W CSE4P36012 229 aa5.51□□□□□ -1.53
PHO88YBR106W CSC1Q06538 782 aa5.51□□□□□ -1.53
PHO88YBR106W NCR1Q12200 1170 aa5.51□□□□□ -1.53
PHO88YBR106W MSB4Q12317 492 aa5.51□□□□□ -1.53
PHO88YBR106W SSA1P10591 642 aaKnown RBP5.5□□□□□ -1.53
PHO88YBR106W MPH3P0CE00 602 aa5.49□□□□□ -1.53
PHO88YBR106W SSA4P22202 642 aaKnown RBP5.49□□□□□ -1.53
PHO88YBR106W BCK2P33306 851 aa5.49□□□□□ -1.53
PHO88YBR106W RGR1P19263 1082 aa5.48□□□□□ -1.53
PHO88YBR106W GLN1P32288 370 aaKnown RBP5.48□□□□□ -1.53
PHO88YBR106W EAP1P36041 632 aaKnown RBP5.48□□□□□ -1.53
PHO88YBR106W DCW1P36091 449 aa5.48□□□□□ -1.53
PHO88YBR106W ORC6P38826 435 aa5.48□□□□□ -1.53
PHO88YBR106W YJL007CP47080 104 aa5.48□□□□□ -1.53
PHO88YBR106W YMR196WQ04336 1088 aa5.48□□□□□ -1.53
PHO88YBR106W YBL036CP38197 257 aa5.47□□□□□ -1.53
PHO88YBR106W SOL3P38858 249 aa5.47□□□□□ -1.53
PHO88YBR106W BIM1P40013 344 aa5.47□□□□□ -1.53
PHO88YBR106W GEF1P37020 779 aa5.46□□□□□ -1.54
PHO88YBR106W MVP1P40959 511 aaKnown RBP5.46□□□□□ -1.54
PHO88YBR106W HST2P53686 357 aa5.46□□□□□ -1.54
PHO88YBR106W TFB4Q12004 338 aa5.46□□□□□ -1.54
PHO88YBR106W TRP5P00931 707 aaKnown RBP5.45□□□□□ -1.54
PHO88YBR106W PEX21P50091 288 aa5.45□□□□□ -1.54
PHO88YBR106W YOL036WQ08206 761 aa5.45□□□□□ -1.54
PHO88YBR106W PKC1P24583 1151 aa5.44□□□□□ -1.54
PHO88YBR106W SIS2P36024 562 aa5.44□□□□□ -1.54
PHO88YBR106W PTC4P38089 393 aa5.44□□□□□ -1.54
PHO88YBR106W MMP1Q12372 583 aa5.44□□□□□ -1.54
PHO88YBR106W SPT5P27692 1063 aaKnown RBP5.43□□□□□ -1.54
PHO88YBR106W DAN4P47179 1161 aa5.43□□□□□ -1.54
PHO88YBR106W SUB2Q07478 446 aaKnown RBP5.43□□□□□ -1.54
PHO88YBR106W SEC61P32915 480 aa5.42□□□□□ -1.54
PHO88YBR106W SLD2P34252 453 aa5.42□□□□□ -1.54
PHO88YBR106W SLX8P40072 274 aa5.42□□□□□ -1.54
PHO88YBR106W FPK1P53739 893 aa5.42□□□□□ -1.54
PHO88YBR106W NST1P53935 1240 aa5.42□□□□□ -1.54
PHO88YBR106W YNL035CP53962 389 aaKnown RBP5.42□□□□□ -1.54
PHO88YBR106W JIP4Q03361 876 aa5.42□□□□□ -1.54
PHO88YBR106W GAP1P19145 602 aaPredicted RBP5.41□□□□□ -1.54
PHO88YBR106W YEL023CP39992 682 aa5.41□□□□□ -1.54
PHO88YBR106W ATG32P40458 529 aa5.41□□□□□ -1.54
PHO88YBR106W SET4P42948 560 aa5.41□□□□□ -1.54
PHO88YBR106W YPR109WQ06104 294 aa5.41□□□□□ -1.54
PHO88YBR106W TIF1P10081 395 aaKnown RBP5.4□□□□□ -1.54
PHO88YBR106W SIT4P20604 311 aa5.39□□□□□ -1.55
PHO88YBR106W SLI15P38283 698 aa5.39□□□□□ -1.55
PHO88YBR106W NIS1P53939 407 aa5.39□□□□□ -1.55
PHO88YBR106W RPL34AP87262 121 aaPredicted RBP5.39□□□□□ -1.55
PHO88YBR106W PKH3Q03306 898 aaPredicted RBP5.39□□□□□ -1.55
PHO88YBR106W KTR1P27810 393 aaKnown RBP5.38□□□□□ -1.55
PHO88YBR106W RTG2P32608 588 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms