RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W ABP1P15891 592 aaKnown RBP9.67□□□□□ -0.86
PRE7YBL041W MAK11P20484 414 aaKnown RBP9.67□□□□□ -0.86
PRE7YBL041W DCW1P36091 449 aa9.67□□□□□ -0.86
PRE7YBL041W DAN4P47179 1161 aa9.67□□□□□ -0.86
PRE7YBL041W EDS1P38073 919 aa9.65□□□□□ -0.86
PRE7YBL041W HTA1P04911 132 aaKnown RBP9.64□□□□□ -0.87
PRE7YBL041W HTA2P04912 132 aa9.64□□□□□ -0.87
PRE7YBL041W MIF2P35201 549 aa9.62□□□□□ -0.87
PRE7YBL041W JIP4Q03361 876 aa9.6□□□□□ -0.87
PRE7YBL041W YEL023CP39992 682 aa9.59□□□□□ -0.87
PRE7YBL041W GRE2Q12068 342 aaKnown RBP9.58□□□□□ -0.88
PRE7YBL041W PTC3P34221 468 aaKnown RBP9.57□□□□□ -0.88
PRE7YBL041W HSL1P34244 1518 aa9.56□□□□□ -0.88
PRE7YBL041W COQ8P27697 501 aa9.55□□□□□ -0.88
PRE7YBL041W SPT6P23615 1451 aaKnown RBP9.54□□□□□ -0.88
PRE7YBL041W PTC4P38089 393 aa9.53□□□□□ -0.88
PRE7YBL041W SAP30P38429 201 aa9.53□□□□□ -0.88
PRE7YBL041W TFG1P41895 735 aaPredicted RBP9.52□□□□□ -0.89
PRE7YBL041W YDL129WQ07555 291 aa9.51□□□□□ -0.89
PRE7YBL041W ATH1P48016 1211 aa9.5□□□□□ -0.89
PRE7YBL041W GUT1P32190 709 aa9.48□□□□□ -0.89
PRE7YBL041W NST1P53935 1240 aa9.48□□□□□ -0.89
PRE7YBL041W SPA2P23201 1466 aaKnown RBP9.45□□□□□ -0.9
PRE7YBL041W SOL3P38858 249 aa9.44□□□□□ -0.9
PRE7YBL041W YDR344CQ05510 147 aa9.44□□□□□ -0.9
PRE7YBL041W PML39Q03760 334 aa9.4□□□□□ -0.9
PRE7YBL041W ILV3P39522 585 aaKnown RBP9.38□□□□□ -0.91
PRE7YBL041W PRE3P38624 215 aa9.37□□□□□ -0.91
PRE7YBL041W HIR3P47171 1648 aa9.35□□□□□ -0.91
PRE7YBL041W CHL1P22516 861 aaPredicted RBP9.35□□□□□ -0.91
PRE7YBL041W MID1P41821 548 aa9.33□□□□□ -0.92
PRE7YBL041W MPH3P0CE00 602 aa9.31□□□□□ -0.92
PRE7YBL041W NOP53Q12080 455 aaKnown RBP9.31□□□□□ -0.92
PRE7YBL041W AI4P03878 556 aa9.3□□□□□ -0.92
PRE7YBL041W YGR273CP53329 174 aa9.29□□□□□ -0.92
PRE7YBL041W BCK2P33306 851 aa9.28□□□□□ -0.92
PRE7YBL041W ECM5Q03214 1411 aa9.27□□□□□ -0.93
PRE7YBL041W THO2P53552 1597 aaKnown RBP9.27□□□□□ -0.93
PRE7YBL041W BUD4P47136 1447 aa9.25□□□□□ -0.93
PRE7YBL041W ELP4Q02884 456 aaKnown RBP9.23□□□□□ -0.93
PRE7YBL041W ARH1P48360 493 aa9.22□□□□□ -0.93
PRE7YBL041W SET1P38827 1080 aaKnown RBP9.2□□□□□ -0.94
PRE7YBL041W XRN1P22147 1528 aaKnown RBP9.19□□□□□ -0.94
PRE7YBL041W PEX29Q03370 554 aa9.18□□□□□ -0.94
PRE7YBL041W VRP1P37370 817 aa9.15□□□□□ -0.94
PRE7YBL041W MDS3P53094 1487 aa9.15□□□□□ -0.95
PRE7YBL041W SLI15P38283 698 aa9.14□□□□□ -0.95
PRE7YBL041W MPC54Q08550 464 aa9.14□□□□□ -0.95
PRE7YBL041W KEX1P09620 729 aa9.11□□□□□ -0.95
PRE7YBL041W SSN2P38931 1420 aa9.11□□□□□ -0.95
PRE7YBL041W HAP5Q02516 242 aa9.1□□□□□ -0.95
PRE7YBL041W SPT23P35210 1082 aa9.08□□□□□ -0.96
PRE7YBL041W YLR326WQ06170 240 aaKnown RBP9.07□□□□□ -0.96
PRE7YBL041W PEP1P32319 1579 aa9.07□□□□□ -0.96
PRE7YBL041W XDJ1P39102 459 aa9.06□□□□□ -0.96
PRE7YBL041W VHR2P40041 505 aa9.05□□□□□ -0.96
PRE7YBL041W BNI4P53858 892 aa9.05□□□□□ -0.96
PRE7YBL041W UBP14P38237 781 aaKnown RBP9.04□□□□□ -0.96
PRE7YBL041W REV3P14284 1504 aa9.04□□□□□ -0.96
PRE7YBL041W NMA111P53920 997 aa9.03□□□□□ -0.96
PRE7YBL041W DPL1Q05567 589 aa9.03□□□□□ -0.96
PRE7YBL041W ATG2P53855 1592 aa9.03□□□□□ -0.96
PRE7YBL041W CDC73Q06697 393 aa9□□□□□ -0.97
PRE7YBL041W PCS60P38137 543 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
PRE7YBL041W PTC2P39966 464 aaKnown RBP8.98□□□□□ -0.97
PRE7YBL041W YML082WQ04533 649 aaKnown RBP8.97□□□□□ -0.97
PRE7YBL041W SIN3P22579 1536 aa8.96□□□□□ -0.97
PRE7YBL041W YPR015CQ12531 247 aa8.96□□□□□ -0.98
PRE7YBL041W YPR148CQ06523 435 aa8.94□□□□□ -0.98
PRE7YBL041W RAD54P32863 898 aa8.93□□□□□ -0.98
PRE7YBL041W YDR090CQ03193 310 aa8.93□□□□□ -0.98
PRE7YBL041W RAM1P22007 431 aa8.92□□□□□ -0.98
PRE7YBL041W ISU2Q12056 156 aa8.91□□□□□ -0.98
PRE7YBL041W DPS1P04802 557 aaKnown RBP8.9□□□□□ -0.98
PRE7YBL041W IFH1P39520 1085 aa8.9□□□□□ -0.98
PRE7YBL041W BPT1P14772 1559 aa8.89□□□□□ -0.99
PRE7YBL041W SSK2P53599 1579 aa8.88□□□□□ -0.99
PRE7YBL041W TAF2P23255 1407 aa8.88□□□□□ -0.99
PRE7YBL041W SKI3P17883 1432 aaKnown RBP8.87□□□□□ -0.99
PRE7YBL041W PDR1P12383 1068 aa8.86□□□□□ -0.99
PRE7YBL041W ESP1Q03018 1630 aa8.81□□□□□ -1
PRE7YBL041W REF2P42073 533 aaPredicted RBP8.81□□□□□ -1
PRE7YBL041W VPS70P47161 811 aa8.81□□□□□ -1
PRE7YBL041W GAP1P19145 602 aaPredicted RBP8.78□□□□□ -1
PRE7YBL041W SRC1Q03707 834 aa8.78□□□□□ -1
PRE7YBL041W KIC1P38692 1080 aa8.77□□□□□ -1.01
PRE7YBL041W YCF1P39109 1515 aaKnown RBP8.75□□□□□ -1.01
PRE7YBL041W ORC6P38826 435 aa8.74□□□□□ -1.01
PRE7YBL041W RPP1BP10622 106 aaKnown RBP8.73□□□□□ -1.01
PRE7YBL041W YPK9Q12697 1472 aa8.72□□□□□ -1.01
PRE7YBL041W RAS1P01119 309 aa8.72□□□□□ -1.01
PRE7YBL041W SDH2P21801 266 aa8.72□□□□□ -1.01
PRE7YBL041W YRR1Q12172 810 aa8.72□□□□□ -1.01
PRE7YBL041W MYO2P19524 1574 aaKnown RBP8.72□□□□□ -1.01
PRE7YBL041W UFD4P33202 1483 aa8.71□□□□□ -1.01
PRE7YBL041W GYP1Q08484 637 aa8.71□□□□□ -1.02
PRE7YBL041W SCC2Q04002 1493 aa8.7□□□□□ -1.02
PRE7YBL041W STR2P47164 639 aa8.68□□□□□ -1.02
PRE7YBL041W CSC1Q06538 782 aa8.68□□□□□ -1.02
PRE7YBL041W COX6P00427 148 aa8.67□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms