RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 KDM6BO15054 1643 aa29.18■■■□□ 2.26
PHGDH-234ENST00000642041 MAPKBP1O60336 1514 aa29.18■■■□□ 2.26
PHGDH-234ENST00000642041 JPH4Q96JJ6 628 aa29.16■■■□□ 2.26
PHGDH-234ENST00000642041 DIP2BQ9P265 1576 aa29.16■■■□□ 2.26
PHGDH-234ENST00000642041 WRNQ14191 1432 aaPredicted RBP eCLIP29.12■■■□□ 2.25
PHGDH-234ENST00000642041 ERICH3Q5RHP9 1530 aa29.04■■■□□ 2.24
PHGDH-234ENST00000642041 ADCY10Q96PN6 1610 aa28.99■■■□□ 2.23
PHGDH-234ENST00000642041 TSPOAP1O95153 1857 aa28.99■■■□□ 2.23
PHGDH-234ENST00000642041 RUSC2Q8N2Y8 1516 aa28.89■■■□□ 2.21
PHGDH-234ENST00000642041 ADGRL1O94910 1474 aa28.88■■■□□ 2.21
PHGDH-234ENST00000642041 TOP2BQ02880 1626 aa28.86■■■□□ 2.21
PHGDH-234ENST00000642041 BIVM-ERCC5R4GMW8 1640 aa28.85■■■□□ 2.21
PHGDH-234ENST00000642041 HECW2Q9P2P5 1572 aa28.81■■■□□ 2.2
PHGDH-234ENST00000642041 CHIC1Q5VXU3 224 aa28.71■■■□□ 2.19
PHGDH-234ENST00000642041 KIAA0586Q9BVV6 1533 aa28.69■■■□□ 2.18
PHGDH-234ENST00000642041 PPRC1Q5VV67 1664 aaKnown RBP28.69■■■□□ 2.18
PHGDH-234ENST00000642041 GLI2P10070 1586 aa28.67■■■□□ 2.18
PHGDH-234ENST00000642041 PTPRGP23470 1445 aa28.64■■■□□ 2.18
PHGDH-234ENST00000642041 PLB1Q6P1J6 1458 aa28.63■■■□□ 2.17
PHGDH-234ENST00000642041 COL17A1Q9UMD9 1497 aaPredicted RBP28.62■■■□□ 2.17
PHGDH-234ENST00000642041 FBXO41Q8TF61 875 aa28.62■■■□□ 2.17
PHGDH-234ENST00000642041 ABCC2Q92887 1545 aa28.62■■■□□ 2.17
PHGDH-234ENST00000642041 ASXL2Q76L83 1435 aa28.61■■■□□ 2.17
PHGDH-234ENST00000642041 TNIKQ9UKE5 1360 aa28.5■■■□□ 2.15
PHGDH-234ENST00000642041 TTBK1Q5TCY1 1321 aaPredicted RBP28.5■■■□□ 2.15
PHGDH-234ENST00000642041 TEX14Q8IWB6 1497 aa28.47■■■□□ 2.15
PHGDH-234ENST00000642041 IGF1RP08069 1367 aa28.46■■■□□ 2.15
PHGDH-234ENST00000642041 UHRF1BP1LA0JNW5 1464 aa28.46■■■□□ 2.15
PHGDH-234ENST00000642041 CARMIL2Q6F5E8 1435 aa28.45■■■□□ 2.15
PHGDH-234ENST00000642041 EPRSP07814 1512 aaKnown RBP28.44■■■□□ 2.14
PHGDH-234ENST00000642041 MAP3K4Q9Y6R4 1608 aa28.44■■■□□ 2.14
PHGDH-234ENST00000642041 CUL7Q14999 1698 aa28.43■■■□□ 2.14
PHGDH-234ENST00000642041 UACAQ9BZF9 1416 aa28.38■■■□□ 2.13
PHGDH-234ENST00000642041 KDM5BQ9UGL1 1544 aa28.33■■■□□ 2.13
PHGDH-234ENST00000642041 KIF27Q86VH2 1401 aa28.3■■■□□ 2.12
PHGDH-234ENST00000642041 CARMIL1Q5VZK9 1371 aa28.23■■■□□ 2.11
PHGDH-234ENST00000642041 IQGAP2Q13576 1575 aa28.22■■■□□ 2.11
PHGDH-234ENST00000642041 ZCCHC11Q5TAX3 1644 aaKnown RBP28.21■■■□□ 2.11
PHGDH-234ENST00000642041 DISP1Q96F81 1524 aa28.2■■■□□ 2.1
PHGDH-234ENST00000642041 WDR7Q9Y4E6 1490 aa28.15■■■□□ 2.1
PHGDH-234ENST00000642041 MAGI3Q5TCQ9 1506 aa28.15■■■□□ 2.1
PHGDH-234ENST00000642041 CD109Q6YHK3 1445 aa28.13■■■□□ 2.09
PHGDH-234ENST00000642041 LMTK3Q96Q04 1460 aa28.12■■■□□ 2.09
PHGDH-234ENST00000642041 KIF21BO75037 1637 aa28.1■■■□□ 2.09
PHGDH-234ENST00000642041 PTPRMP28827 1452 aa28.06■■■□□ 2.08
PHGDH-234ENST00000642041 CFAP43Q8NDM7 1665 aa28.06■■■□□ 2.08
PHGDH-234ENST00000642041 UGGT2Q9NYU1 1516 aa28.04■■■□□ 2.08
PHGDH-234ENST00000642041 KCNH8Q96L42 1107 aa28.01■■■□□ 2.07
PHGDH-234ENST00000642041 ADAMTSL3P82987 1691 aa27.99■■■□□ 2.07
PHGDH-234ENST00000642041 KIAA0556O60303 1618 aa27.98■■■□□ 2.07
PHGDH-234ENST00000642041 ARAP3Q8WWN8 1544 aa27.97■■■□□ 2.07
PHGDH-234ENST00000642041 PCF11O94913 1555 aaKnown RBP27.95■■■□□ 2.07
PHGDH-234ENST00000642041 SOCS7O14512 581 aa27.88■■■□□ 2.05
PHGDH-234ENST00000642041 EEA1Q15075 1411 aa27.87■■■□□ 2.05
PHGDH-234ENST00000642041 PHLDB1Q86UU1 1377 aa27.84■■■□□ 2.05
PHGDH-234ENST00000642041 RAPGEF2Q9Y4G8 1499 aa27.83■■■□□ 2.05
PHGDH-234ENST00000642041 ILDR2Q71H61 639 aa27.83■■■□□ 2.05
PHGDH-234ENST00000642041 CERKQ8TCT0 537 aa27.82■■■□□ 2.04
PHGDH-234ENST00000642041 ABCA8O94911 1581 aa27.82■■■□□ 2.04
PHGDH-234ENST00000642041 BCORL1Q5H9F3 1711 aa27.81■■■□□ 2.04
PHGDH-234ENST00000642041 MADDQ8WXG6 1647 aa27.78■■■□□ 2.04
PHGDH-234ENST00000642041 DISP3Q9P2K9 1392 aa27.77■■■□□ 2.04
PHGDH-234ENST00000642041 ARID4BQ4LE39 1312 aaPredicted RBP27.76■■■□□ 2.03
PHGDH-234ENST00000642041 RAPGEF3O95398 923 aa27.76■■■□□ 2.03
PHGDH-234ENST00000642041 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
PHGDH-234ENST00000642041 HSPA2P54652 639 aa27.73■■■□□ 2.03
PHGDH-234ENST00000642041 NEO1Q92859 1461 aa27.66■■■□□ 2.02
PHGDH-234ENST00000642041 ABCA9Q8IUA7 1624 aa27.66■■■□□ 2.02
PHGDH-234ENST00000642041 RIMS1Q86UR5 1692 aaKnown RBP27.65■■■□□ 2.02
PHGDH-234ENST00000642041 FRMPD1Q5SYB0 1578 aa27.6■■■□□ 2.01
PHGDH-234ENST00000642041 ATP10BO94823 1461 aa27.6■■■□□ 2.01
PHGDH-234ENST00000642041 CTTNBP2Q8WZ74 1663 aa27.59■■■□□ 2.01
PHGDH-234ENST00000642041 ARID3CA6NKF2 412 aa27.57■■■□□ 2
PHGDH-234ENST00000642041 FAM9AQ8IZU1 332 aaPredicted RBP27.55■■■□□ 2
PHGDH-234ENST00000642041 ARHGEF40Q8TER5 1519 aa27.53■■■□□ 2
PHGDH-234ENST00000642041 PLPPR3Q6T4P5 718 aa27.53■■■□□ 2
PHGDH-234ENST00000642041 POGZQ7Z3K3 1410 aa27.5■■□□□ 1.99
PHGDH-234ENST00000642041 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
PHGDH-234ENST00000642041 FANCAO15360 1455 aa27.45■■□□□ 1.99
PHGDH-234ENST00000642041 DENND4BO75064 1496 aaPredicted RBP27.45■■□□□ 1.99
PHGDH-234ENST00000642041 SPATA31D1Q6ZQQ2 1576 aa27.45■■□□□ 1.99
PHGDH-234ENST00000642041 AKNAQ7Z591 1439 aa27.43■■□□□ 1.98
PHGDH-234ENST00000642041 FHOD3Q2V2M9 1422 aa27.42■■□□□ 1.98
PHGDH-234ENST00000642041 RICTORQ6R327 1708 aa27.41■■□□□ 1.98
PHGDH-234ENST00000642041 DMRT2Q9Y5R5 561 aa27.4■■□□□ 1.98
PHGDH-234ENST00000642041 LOC105371045A0A1W2PR82 267 aa27.39■■□□□ 1.98
PHGDH-234ENST00000642041 YEATS2Q9ULM3 1422 aa27.39■■□□□ 1.97
PHGDH-234ENST00000642041 P3H3Q8IVL6 736 aa27.38■■□□□ 1.97
PHGDH-234ENST00000642041 TTC37Q6PGP7 1564 aa27.35■■□□□ 1.97
PHGDH-234ENST00000642041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
PHGDH-234ENST00000642041 HNRNPUL2Q1KMD3 747 aaKnown RBP27.35■■□□□ 1.97
PHGDH-234ENST00000642041 PRXQ9BXM0 1461 aa27.35■■□□□ 1.97
PHGDH-234ENST00000642041 MLECQ14165 292 aa27.34■■□□□ 1.97
PHGDH-234ENST00000642041 SIGLEC1Q9BZZ2 1709 aa27.33■■□□□ 1.97
PHGDH-234ENST00000642041 ZMYM4Q5VZL5 1548 aa27.33■■□□□ 1.97
PHGDH-234ENST00000642041 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
PHGDH-234ENST00000642041 EFCAB5A4FU69 1503 aa27.31■■□□□ 1.96
PHGDH-234ENST00000642041 ZFYVE16Q7Z3T8 1539 aa27.31■■□□□ 1.96
PHGDH-234ENST00000642041 MAGI2Q86UL8 1455 aa27.3■■□□□ 1.96
PHGDH-234ENST00000642041 PREX1Q8TCU6 1659 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms