RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 KIAA0586Q9BVV6 1533 aa16.74■□□□□ 0.27
PHGDH-224ENST00000641711 CTTNBP2Q8WZ74 1663 aa16.72■□□□□ 0.27
PHGDH-224ENST00000641711 IQGAP2Q13576 1575 aa16.69■□□□□ 0.26
PHGDH-224ENST00000641711 ARHGEF11O15085 1522 aa16.68■□□□□ 0.26
PHGDH-224ENST00000641711 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
PHGDH-224ENST00000641711 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
PHGDH-224ENST00000641711 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
PHGDH-224ENST00000641711 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
PHGDH-224ENST00000641711 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
PHGDH-224ENST00000641711 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-224ENST00000641711 JPH4Q96JJ6 628 aa16.58■□□□□ 0.24
PHGDH-224ENST00000641711 PRG4Q92954 1404 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-224ENST00000641711 CARMIL2Q6F5E8 1435 aa16.56■□□□□ 0.24
PHGDH-224ENST00000641711 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
PHGDH-224ENST00000641711 LOC105371045A0A1W2PR82 267 aa16.53■□□□□ 0.24
PHGDH-224ENST00000641711 KIAA0556O60303 1618 aa16.52■□□□□ 0.24
PHGDH-224ENST00000641711 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
PHGDH-224ENST00000641711 DISP1Q96F81 1524 aa16.5■□□□□ 0.23
PHGDH-224ENST00000641711 SAMD9Q5K651 1589 aa16.5■□□□□ 0.23
PHGDH-224ENST00000641711 EFCAB5A4FU69 1503 aa16.5■□□□□ 0.23
PHGDH-224ENST00000641711 TNIKQ9UKE5 1360 aa16.47■□□□□ 0.23
PHGDH-224ENST00000641711 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
PHGDH-224ENST00000641711 PTPRGP23470 1445 aa16.4■□□□□ 0.22
PHGDH-224ENST00000641711 UHRF1BP1LA0JNW5 1464 aa16.36■□□□□ 0.21
PHGDH-224ENST00000641711 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
PHGDH-224ENST00000641711 ABCC2Q92887 1545 aa16.35■□□□□ 0.21
PHGDH-224ENST00000641711 ADCY10Q96PN6 1610 aa16.34■□□□□ 0.21
PHGDH-224ENST00000641711 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-224ENST00000641711 UACAQ9BZF9 1416 aa16.33■□□□□ 0.2
PHGDH-224ENST00000641711 ARHGAP35Q9NRY4 1499 aa16.33■□□□□ 0.2
PHGDH-224ENST00000641711 ABCA8O94911 1581 aa16.33■□□□□ 0.2
PHGDH-224ENST00000641711 CLIP1P30622 1438 aa16.29■□□□□ 0.2
PHGDH-224ENST00000641711 FHOD3Q2V2M9 1422 aa16.29■□□□□ 0.2
PHGDH-224ENST00000641711 FMN1Q68DA7 1419 aa16.29■□□□□ 0.2
PHGDH-224ENST00000641711 RAPGEF6Q8TEU7 1601 aa16.28■□□□□ 0.2
PHGDH-224ENST00000641711 CEP162Q5TB80 1403 aa16.27■□□□□ 0.19
PHGDH-224ENST00000641711 MAPKBP1O60336 1514 aa16.26■□□□□ 0.19
PHGDH-224ENST00000641711 KDM5BQ9UGL1 1544 aa16.26■□□□□ 0.19
PHGDH-224ENST00000641711 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
PHGDH-224ENST00000641711 PLB1Q6P1J6 1458 aa16.25■□□□□ 0.19
PHGDH-224ENST00000641711 HECW1Q76N89 1606 aa16.23■□□□□ 0.19
PHGDH-224ENST00000641711 ZCCHC11Q5TAX3 1644 aaKnown RBP16.21■□□□□ 0.19
PHGDH-224ENST00000641711 NPM1P06748 294 aaKnown RBP eCLIP16.2■□□□□ 0.18
PHGDH-224ENST00000641711 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
PHGDH-224ENST00000641711 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-224ENST00000641711 NUP153P49790 1475 aaKnown RBP16.17■□□□□ 0.18
PHGDH-224ENST00000641711 FYCO1Q9BQS8 1478 aa16.17■□□□□ 0.18
PHGDH-224ENST00000641711 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-224ENST00000641711 CASKIN1Q8WXD9 1431 aa16.16■□□□□ 0.18
PHGDH-224ENST00000641711 PCF11O94913 1555 aaKnown RBP16.15■□□□□ 0.18
PHGDH-224ENST00000641711 CCDC18Q5T9S5 1454 aa16.13■□□□□ 0.17
PHGDH-224ENST00000641711 ATP10BO94823 1461 aa16.12■□□□□ 0.17
PHGDH-224ENST00000641711 ASXL2Q76L83 1435 aa16.11■□□□□ 0.17
PHGDH-224ENST00000641711 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
PHGDH-224ENST00000641711 WDR7Q9Y4E6 1490 aa16.11■□□□□ 0.17
PHGDH-224ENST00000641711 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
PHGDH-224ENST00000641711 EPRSP07814 1512 aaKnown RBP16.1■□□□□ 0.17
PHGDH-224ENST00000641711 KIF13AQ9H1H9 1805 aa16.1■□□□□ 0.17
PHGDH-224ENST00000641711 VPS8Q8N3P4 1428 aa16.1■□□□□ 0.17
PHGDH-224ENST00000641711 GLI2P10070 1586 aa16.09■□□□□ 0.17
PHGDH-224ENST00000641711 PCGF6Q9BYE7 350 aa16.08■□□□□ 0.16
PHGDH-224ENST00000641711 TRIM26Q12899 539 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-224ENST00000641711 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
PHGDH-224ENST00000641711 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
PHGDH-224ENST00000641711 CFAP43Q8NDM7 1665 aa16.03■□□□□ 0.16
PHGDH-224ENST00000641711 CDK11AQ9UQ88 783 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-224ENST00000641711 MAP3K1Q13233 1512 aa16.01■□□□□ 0.15
PHGDH-224ENST00000641711 ABCA9Q8IUA7 1624 aa16.01■□□□□ 0.15
PHGDH-224ENST00000641711 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
PHGDH-224ENST00000641711 PLEKHD1A6NEE1 506 aa15.99■□□□□ 0.15
PHGDH-224ENST00000641711 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-224ENST00000641711 TROQ12816 1431 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-224ENST00000641711 KIF14Q15058 1648 aa15.97■□□□□ 0.15
PHGDH-224ENST00000641711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-224ENST00000641711 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
PHGDH-224ENST00000641711 TIAM1Q13009 1591 aa15.96■□□□□ 0.15
PHGDH-224ENST00000641711 EHBP1L1Q8N3D4 1523 aa15.96■□□□□ 0.15
PHGDH-224ENST00000641711 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-224ENST00000641711 FAM69CQ0P6D2 419 aa15.95■□□□□ 0.14
PHGDH-224ENST00000641711 ATP1B4Q9UN42 357 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-224ENST00000641711 HRCP23327 699 aa15.94■□□□□ 0.14
PHGDH-224ENST00000641711 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
PHGDH-224ENST00000641711 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
PHGDH-224ENST00000641711 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
PHGDH-224ENST00000641711 ARAP3Q8WWN8 1544 aa15.93■□□□□ 0.14
PHGDH-224ENST00000641711 PPRC1Q5VV67 1664 aaKnown RBP15.92■□□□□ 0.14
PHGDH-224ENST00000641711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
PHGDH-224ENST00000641711 CFAP74Q9C0B2 1584 aa15.91■□□□□ 0.14
PHGDH-224ENST00000641711 MYO5CQ9NQX4 1742 aa15.9■□□□□ 0.14
PHGDH-224ENST00000641711 MTUS2Q5JR59 1369 aa15.89■□□□□ 0.13
PHGDH-224ENST00000641711 TSPOAP1O95153 1857 aa15.89■□□□□ 0.13
PHGDH-224ENST00000641711 TTC37Q6PGP7 1564 aa15.89■□□□□ 0.13
PHGDH-224ENST00000641711 CD109Q6YHK3 1445 aa15.89■□□□□ 0.13
PHGDH-224ENST00000641711 SUPT6HQ7KZ85 1726 aaKnown RBP15.88■□□□□ 0.13
PHGDH-224ENST00000641711 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
PHGDH-224ENST00000641711 LRRC9Q6ZRR7 1453 aa15.86■□□□□ 0.13
PHGDH-224ENST00000641711 KCNH8Q96L42 1107 aa15.86■□□□□ 0.13
PHGDH-224ENST00000641711 NEO1Q92859 1461 aa15.85■□□□□ 0.13
PHGDH-224ENST00000641711 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
PHGDH-224ENST00000641711 ITSN2Q9NZM3 1697 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms