RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 NUP160Q12769 1436 aa19.09■□□□□ 0.65
KCNMA1-289ENST00000640807 TNIKQ9UKE5 1360 aa19.08■□□□□ 0.65
KCNMA1-289ENST00000640807 KIAA0586Q9BVV6 1533 aa19.07■□□□□ 0.64
KCNMA1-289ENST00000640807 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
KCNMA1-289ENST00000640807 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
KCNMA1-289ENST00000640807 CTTNBP2Q8WZ74 1663 aa19.01■□□□□ 0.63
KCNMA1-289ENST00000640807 IQGAP2Q13576 1575 aa19■□□□□ 0.63
KCNMA1-289ENST00000640807 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
KCNMA1-289ENST00000640807 P3H3Q8IVL6 736 aa18.94■□□□□ 0.62
KCNMA1-289ENST00000640807 CLIP1P30622 1438 aa18.94■□□□□ 0.62
KCNMA1-289ENST00000640807 CEP162Q5TB80 1403 aa18.94■□□□□ 0.62
KCNMA1-289ENST00000640807 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
KCNMA1-289ENST00000640807 PRG4Q92954 1404 aaPredicted RBP18.91■□□□□ 0.62
KCNMA1-289ENST00000640807 UGGT2Q9NYU1 1516 aa18.89■□□□□ 0.61
KCNMA1-289ENST00000640807 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
KCNMA1-289ENST00000640807 EFCAB5A4FU69 1503 aa18.84■□□□□ 0.61
KCNMA1-289ENST00000640807 SHROOM2Q13796 1616 aa18.83■□□□□ 0.61
KCNMA1-289ENST00000640807 ARHGAP35Q9NRY4 1499 aa18.83■□□□□ 0.6
KCNMA1-289ENST00000640807 DISP1Q96F81 1524 aa18.82■□□□□ 0.6
KCNMA1-289ENST00000640807 FHOD3Q2V2M9 1422 aa18.81■□□□□ 0.6
KCNMA1-289ENST00000640807 KIAA0556O60303 1618 aa18.79■□□□□ 0.6
KCNMA1-289ENST00000640807 SAMD9Q5K651 1589 aa18.78■□□□□ 0.6
KCNMA1-289ENST00000640807 PTPRGP23470 1445 aa18.77■□□□□ 0.6
KCNMA1-289ENST00000640807 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
KCNMA1-289ENST00000640807 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
KCNMA1-289ENST00000640807 ATP1B4Q9UN42 357 aaPredicted RBP18.75■□□□□ 0.59
KCNMA1-289ENST00000640807 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
KCNMA1-289ENST00000640807 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
KCNMA1-289ENST00000640807 DNAJC5Q9H3Z4 198 aa18.71■□□□□ 0.59
KCNMA1-289ENST00000640807 CYB5RLQ6IPT4 315 aa18.68■□□□□ 0.58
KCNMA1-289ENST00000640807 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
KCNMA1-289ENST00000640807 RIMBP3CA6NJZ7 1639 aa18.66■□□□□ 0.58
KCNMA1-289ENST00000640807 RIMBP3BA6NNM3 1639 aa18.66■□□□□ 0.58
KCNMA1-289ENST00000640807 RIMBP3Q9UFD9 1639 aa18.66■□□□□ 0.58
KCNMA1-289ENST00000640807 APLP2Q06481 763 aa18.64■□□□□ 0.58
KCNMA1-289ENST00000640807 PLB1Q6P1J6 1458 aa18.62■□□□□ 0.57
KCNMA1-289ENST00000640807 UACAQ9BZF9 1416 aa18.62■□□□□ 0.57
KCNMA1-289ENST00000640807 ARID3CA6NKF2 412 aa18.62■□□□□ 0.57
KCNMA1-289ENST00000640807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
KCNMA1-289ENST00000640807 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
KCNMA1-289ENST00000640807 CASKIN1Q8WXD9 1431 aa18.59■□□□□ 0.57
KCNMA1-289ENST00000640807 NPM1P06748 294 aaKnown RBP eCLIP18.58■□□□□ 0.57
KCNMA1-289ENST00000640807 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
KCNMA1-289ENST00000640807 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
KCNMA1-289ENST00000640807 PCF11O94913 1555 aaKnown RBP18.55■□□□□ 0.56
KCNMA1-289ENST00000640807 ABCA8O94911 1581 aa18.54■□□□□ 0.56
KCNMA1-289ENST00000640807 ABCC2Q92887 1545 aa18.53■□□□□ 0.56
KCNMA1-289ENST00000640807 HECW1Q76N89 1606 aa18.53■□□□□ 0.56
KCNMA1-289ENST00000640807 UHRF1BP1LA0JNW5 1464 aa18.51■□□□□ 0.55
KCNMA1-289ENST00000640807 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
KCNMA1-289ENST00000640807 NUP153P49790 1475 aaKnown RBP18.51■□□□□ 0.55
KCNMA1-289ENST00000640807 EPRSP07814 1512 aaKnown RBP18.48■□□□□ 0.55
KCNMA1-289ENST00000640807 CCDC18Q5T9S5 1454 aa18.47■□□□□ 0.55
KCNMA1-289ENST00000640807 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
KCNMA1-289ENST00000640807 ADCY10Q96PN6 1610 aa18.46■□□□□ 0.55
KCNMA1-289ENST00000640807 ATP10BO94823 1461 aa18.46■□□□□ 0.55
KCNMA1-289ENST00000640807 CDK13Q14004 1512 aaKnown RBP18.45■□□□□ 0.54
KCNMA1-289ENST00000640807 KDM5BQ9UGL1 1544 aa18.43■□□□□ 0.54
KCNMA1-289ENST00000640807 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
KCNMA1-289ENST00000640807 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
KCNMA1-289ENST00000640807 TIAM1Q13009 1591 aa18.39■□□□□ 0.53
KCNMA1-289ENST00000640807 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
KCNMA1-289ENST00000640807 KANK4Q5T7N3 995 aaPredicted RBP18.38■□□□□ 0.53
KCNMA1-289ENST00000640807 KCNH8Q96L42 1107 aa18.38■□□□□ 0.53
KCNMA1-289ENST00000640807 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
KCNMA1-289ENST00000640807 LRRIQ1Q96JM4 1722 aa18.36■□□□□ 0.53
KCNMA1-289ENST00000640807 ASXL2Q76L83 1435 aa18.34■□□□□ 0.53
KCNMA1-289ENST00000640807 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
KCNMA1-289ENST00000640807 CFAP43Q8NDM7 1665 aa18.33■□□□□ 0.53
KCNMA1-289ENST00000640807 TROQ12816 1431 aaPredicted RBP18.33■□□□□ 0.52
KCNMA1-289ENST00000640807 WDR7Q9Y4E6 1490 aa18.3■□□□□ 0.52
KCNMA1-289ENST00000640807 EHBP1L1Q8N3D4 1523 aa18.29■□□□□ 0.52
KCNMA1-289ENST00000640807 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.52
KCNMA1-289ENST00000640807 MAPKBP1O60336 1514 aa18.27■□□□□ 0.52
KCNMA1-289ENST00000640807 FAM69CQ0P6D2 419 aa18.23■□□□□ 0.51
KCNMA1-289ENST00000640807 KIF14Q15058 1648 aa18.22■□□□□ 0.51
KCNMA1-289ENST00000640807 CCNB3Q8WWL7 1395 aa18.22■□□□□ 0.51
KCNMA1-289ENST00000640807 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
KCNMA1-289ENST00000640807 SUPT6HQ7KZ85 1726 aaKnown RBP18.21■□□□□ 0.51
KCNMA1-289ENST00000640807 TRHP20396 242 aaPredicted RBP18.21■□□□□ 0.51
KCNMA1-289ENST00000640807 ABCC10Q5T3U5 1492 aa18.17■□□□□ 0.5
KCNMA1-289ENST00000640807 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
KCNMA1-289ENST00000640807 PHLDB1Q86UU1 1377 aa18.15■□□□□ 0.5
KCNMA1-289ENST00000640807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.15■□□□□ 0.5
KCNMA1-289ENST00000640807 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
KCNMA1-289ENST00000640807 CD109Q6YHK3 1445 aa18.13■□□□□ 0.49
KCNMA1-289ENST00000640807 MYOM3Q5VTT5 1437 aa18.12■□□□□ 0.49
KCNMA1-289ENST00000640807 EFCAB2Q5VUJ9 269 aa18.11■□□□□ 0.49
KCNMA1-289ENST00000640807 TTC37Q6PGP7 1564 aa18.11■□□□□ 0.49
KCNMA1-289ENST00000640807 GPATCH8Q9UKJ3 1502 aaKnown RBP18.11■□□□□ 0.49
KCNMA1-289ENST00000640807 DIP2BQ9P265 1576 aa18.1■□□□□ 0.49
KCNMA1-289ENST00000640807 ABCA9Q8IUA7 1624 aa18.1■□□□□ 0.49
KCNMA1-289ENST00000640807 FAM50AQ14320 339 aaKnown RBP18.1■□□□□ 0.49
KCNMA1-289ENST00000640807 PLCH2O75038 1416 aa18.09■□□□□ 0.49
KCNMA1-289ENST00000640807 GLI2P10070 1586 aa18.09■□□□□ 0.49
KCNMA1-289ENST00000640807 ARHGAP5Q13017 1502 aa18.08■□□□□ 0.48
KCNMA1-289ENST00000640807 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
KCNMA1-289ENST00000640807 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
KCNMA1-289ENST00000640807 MYO5CQ9NQX4 1742 aa18.05■□□□□ 0.48
KCNMA1-289ENST00000640807 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms