RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 CLASP1Q7Z460 1538 aa35.28■■■■□ 3.24
TSPAN9-208ENST00000640568 KIAA0586Q9BVV6 1533 aa35.21■■■■□ 3.23
TSPAN9-208ENST00000640568 UBTFP17480 764 aaKnown RBP35.18■■■■□ 3.22
TSPAN9-208ENST00000640568 IQGAP2Q13576 1575 aa35.18■■■■□ 3.22
TSPAN9-208ENST00000640568 SHROOM2Q13796 1616 aa35.06■■■■□ 3.2
TSPAN9-208ENST00000640568 JPH4Q96JJ6 628 aa35.03■■■■□ 3.2
TSPAN9-208ENST00000640568 LOC105371045A0A1W2PR82 267 aa34.97■■■■□ 3.19
TSPAN9-208ENST00000640568 UGGT2Q9NYU1 1516 aa34.95■■■■□ 3.19
TSPAN9-208ENST00000640568 PRG4Q92954 1404 aaPredicted RBP34.94■■■■□ 3.18
TSPAN9-208ENST00000640568 TNIKQ9UKE5 1360 aa34.93■■■■□ 3.18
TSPAN9-208ENST00000640568 RANGAP1P46060 587 aaPredicted RBP34.9■■■■□ 3.18
TSPAN9-208ENST00000640568 DNAJC5Q9H3Z4 198 aa34.9■■■■□ 3.18
TSPAN9-208ENST00000640568 ARHGEF11O15085 1522 aa34.9■■■■□ 3.18
TSPAN9-208ENST00000640568 CARMIL2Q6F5E8 1435 aa34.87■■■■□ 3.17
TSPAN9-208ENST00000640568 RIMBP3CA6NJZ7 1639 aa34.86■■■■□ 3.17
TSPAN9-208ENST00000640568 RIMBP3BA6NNM3 1639 aa34.86■■■■□ 3.17
TSPAN9-208ENST00000640568 RIMBP3Q9UFD9 1639 aa34.86■■■■□ 3.17
TSPAN9-208ENST00000640568 ERCC6L2Q5T890 1561 aa34.84■■■■□ 3.17
TSPAN9-208ENST00000640568 KIAA0556O60303 1618 aa34.83■■■■□ 3.17
TSPAN9-208ENST00000640568 DISP1Q96F81 1524 aa34.81■■■■□ 3.16
TSPAN9-208ENST00000640568 SAMD9Q5K651 1589 aa34.79■■■■□ 3.16
TSPAN9-208ENST00000640568 EFCAB5A4FU69 1503 aa34.78■■■■□ 3.16
TSPAN9-208ENST00000640568 P3H3Q8IVL6 736 aa34.69■■■■□ 3.14
TSPAN9-208ENST00000640568 CLIP1P30622 1438 aa34.67■■■■□ 3.14
TSPAN9-208ENST00000640568 CEP162Q5TB80 1403 aa34.67■■■■□ 3.14
TSPAN9-208ENST00000640568 ARHGAP35Q9NRY4 1499 aa34.65■■■■□ 3.14
TSPAN9-208ENST00000640568 TTBK1Q5TCY1 1321 aaPredicted RBP34.64■■■■□ 3.14
TSPAN9-208ENST00000640568 ARAP1Q96P48 1450 aa34.64■■■■□ 3.14
TSPAN9-208ENST00000640568 FHOD3Q2V2M9 1422 aa34.61■■■■□ 3.13
TSPAN9-208ENST00000640568 PTPRGP23470 1445 aa34.59■■■■□ 3.13
TSPAN9-208ENST00000640568 CYB5RLQ6IPT4 315 aa34.53■■■■□ 3.12
TSPAN9-208ENST00000640568 FMN1Q68DA7 1419 aa34.43■■■■□ 3.1
TSPAN9-208ENST00000640568 UACAQ9BZF9 1416 aa34.39■■■■□ 3.1
TSPAN9-208ENST00000640568 RAPGEF6Q8TEU7 1601 aa34.37■■■■□ 3.09
TSPAN9-208ENST00000640568 PLB1Q6P1J6 1458 aa34.37■■■■□ 3.09
TSPAN9-208ENST00000640568 ABCA8O94911 1581 aa34.36■■■■□ 3.09
TSPAN9-208ENST00000640568 ADCY10Q96PN6 1610 aa34.34■■■■□ 3.09
TSPAN9-208ENST00000640568 ABCC2Q92887 1545 aa34.34■■■■□ 3.09
TSPAN9-208ENST00000640568 UHRF1BP1LA0JNW5 1464 aa34.3■■■■□ 3.08
TSPAN9-208ENST00000640568 PCF11O94913 1555 aaKnown RBP34.25■■■■□ 3.07
TSPAN9-208ENST00000640568 HECW1Q76N89 1606 aa34.24■■■■□ 3.07
TSPAN9-208ENST00000640568 ATP1B4Q9UN42 357 aaPredicted RBP34.23■■■■□ 3.07
TSPAN9-208ENST00000640568 VPS8Q8N3P4 1428 aa34.22■■■■□ 3.07
TSPAN9-208ENST00000640568 NPM1P06748 294 aaKnown RBP eCLIP34.2■■■■□ 3.07
TSPAN9-208ENST00000640568 CASKIN1Q8WXD9 1431 aa34.2■■■■□ 3.07
TSPAN9-208ENST00000640568 FYCO1Q9BQS8 1478 aa34.18■■■■□ 3.06
TSPAN9-208ENST00000640568 NUP153P49790 1475 aaKnown RBP34.17■■■■□ 3.06
TSPAN9-208ENST00000640568 ZCCHC11Q5TAX3 1644 aaKnown RBP34.16■■■■□ 3.06
TSPAN9-208ENST00000640568 ARID3CA6NKF2 412 aa34.14■■■■□ 3.06
TSPAN9-208ENST00000640568 KDM5BQ9UGL1 1544 aa34.13■■■■□ 3.05
TSPAN9-208ENST00000640568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.09■■■■□ 3.05
TSPAN9-208ENST00000640568 HNRNPUL2Q1KMD3 747 aaKnown RBP34.09■■■■□ 3.05
TSPAN9-208ENST00000640568 LRRIQ1Q96JM4 1722 aa34.09■■■■□ 3.05
TSPAN9-208ENST00000640568 EPRSP07814 1512 aaKnown RBP34.06■■■■□ 3.04
TSPAN9-208ENST00000640568 ATP10BO94823 1461 aa34.06■■■■□ 3.04
TSPAN9-208ENST00000640568 CCDC18Q5T9S5 1454 aa34.06■■■■□ 3.04
TSPAN9-208ENST00000640568 CDK13Q14004 1512 aaKnown RBP34.03■■■■□ 3.04
TSPAN9-208ENST00000640568 MAPKBP1O60336 1514 aa33.99■■■■□ 3.03
TSPAN9-208ENST00000640568 ASXL2Q76L83 1435 aa33.93■■■■□ 3.02
TSPAN9-208ENST00000640568 APLP2Q06481 763 aa33.92■■■■□ 3.02
TSPAN9-208ENST00000640568 CFAP43Q8NDM7 1665 aa33.92■■■■□ 3.02
TSPAN9-208ENST00000640568 CDK11AQ9UQ88 783 aaPredicted RBP33.91■■■■□ 3.02
TSPAN9-208ENST00000640568 WDR7Q9Y4E6 1490 aa33.88■■■■□ 3.01
TSPAN9-208ENST00000640568 PLEKHD1A6NEE1 506 aa33.88■■■■□ 3.01
TSPAN9-208ENST00000640568 TIAM1Q13009 1591 aa33.87■■■■□ 3.01
TSPAN9-208ENST00000640568 MAP3K1Q13233 1512 aa33.82■■■■□ 3
TSPAN9-208ENST00000640568 KCNH8Q96L42 1107 aa33.76■■■■□ 3
TSPAN9-208ENST00000640568 MTUS2Q5JR59 1369 aa33.76■■■■□ 3
TSPAN9-208ENST00000640568 TROQ12816 1431 aaPredicted RBP33.76■■■□□ 2.99
TSPAN9-208ENST00000640568 MAGI3Q5TCQ9 1506 aa33.74■■■□□ 2.99
TSPAN9-208ENST00000640568 DIP2BQ9P265 1576 aa33.74■■■□□ 2.99
TSPAN9-208ENST00000640568 EHBP1L1Q8N3D4 1523 aa33.74■■■□□ 2.99
TSPAN9-208ENST00000640568 ABCC10Q5T3U5 1492 aa33.73■■■□□ 2.99
TSPAN9-208ENST00000640568 KIF14Q15058 1648 aa33.71■■■□□ 2.99
TSPAN9-208ENST00000640568 KIF13AQ9H1H9 1805 aa33.71■■■□□ 2.99
TSPAN9-208ENST00000640568 LRRC9Q6ZRR7 1453 aa33.68■■■□□ 2.98
TSPAN9-208ENST00000640568 TRHP20396 242 aaPredicted RBP33.68■■■□□ 2.98
TSPAN9-208ENST00000640568 FAM69CQ0P6D2 419 aa33.66■■■□□ 2.98
TSPAN9-208ENST00000640568 GLI2P10070 1586 aa33.65■■■□□ 2.98
TSPAN9-208ENST00000640568 SUPT6HQ7KZ85 1726 aaKnown RBP33.63■■■□□ 2.97
TSPAN9-208ENST00000640568 KANK4Q5T7N3 995 aaPredicted RBP33.61■■■□□ 2.97
TSPAN9-208ENST00000640568 ABCA9Q8IUA7 1624 aa33.61■■■□□ 2.97
TSPAN9-208ENST00000640568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.58■■■□□ 2.97
TSPAN9-208ENST00000640568 TTC37Q6PGP7 1564 aa33.57■■■□□ 2.96
TSPAN9-208ENST00000640568 MAP3K4Q9Y6R4 1608 aa33.55■■■□□ 2.96
TSPAN9-208ENST00000640568 TSPOAP1O95153 1857 aa33.55■■■□□ 2.96
TSPAN9-208ENST00000640568 MYO5CQ9NQX4 1742 aa33.52■■■□□ 2.96
TSPAN9-208ENST00000640568 CD109Q6YHK3 1445 aa33.5■■■□□ 2.95
TSPAN9-208ENST00000640568 NCOA2Q15596 1464 aa33.49■■■□□ 2.95
TSPAN9-208ENST00000640568 PPARGC1BQ86YN6 1023 aaKnown RBP33.46■■■□□ 2.95
TSPAN9-208ENST00000640568 CDC42BPAQ5VT25 1732 aa33.45■■■□□ 2.94
TSPAN9-208ENST00000640568 CCNB3Q8WWL7 1395 aa33.43■■■□□ 2.94
TSPAN9-208ENST00000640568 ITSN2Q9NZM3 1697 aa33.43■■■□□ 2.94
TSPAN9-208ENST00000640568 PREX2Q70Z35 1606 aa33.41■■■□□ 2.94
TSPAN9-208ENST00000640568 PPRC1Q5VV67 1664 aaKnown RBP33.39■■■□□ 2.94
TSPAN9-208ENST00000640568 CDC42BPBQ9Y5S2 1711 aa33.38■■■□□ 2.93
TSPAN9-208ENST00000640568 TEX14Q8IWB6 1497 aa33.37■■■□□ 2.93
TSPAN9-208ENST00000640568 PLCH2O75038 1416 aa33.37■■■□□ 2.93
TSPAN9-208ENST00000640568 ARHGAP5Q13017 1502 aa33.36■■■□□ 2.93
TSPAN9-208ENST00000640568 GPATCH8Q9UKJ3 1502 aaKnown RBP33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms