RNA–Protein interactions for RNA: ENST00000640101.1

SPIN3-234, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,070 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-234ENST00000640101 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
SPIN3-234ENST00000640101 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.41
SPIN3-234ENST00000640101 RAB3GAP2Q9H2M9 1393 aa17.57■□□□□ 0.4
SPIN3-234ENST00000640101 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
SPIN3-234ENST00000640101 MSH5O43196 834 aa17.55■□□□□ 0.4
SPIN3-234ENST00000640101 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
SPIN3-234ENST00000640101 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
SPIN3-234ENST00000640101 CADPSQ9ULU8 1353 aa17.54■□□□□ 0.4
SPIN3-234ENST00000640101 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
SPIN3-234ENST00000640101 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
SPIN3-234ENST00000640101 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
SPIN3-234ENST00000640101 NEFLP07196 543 aa17.49■□□□□ 0.39
SPIN3-234ENST00000640101 PHLDB1Q86UU1 1377 aa17.49■□□□□ 0.39
SPIN3-234ENST00000640101 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.38
SPIN3-234ENST00000640101 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
SPIN3-234ENST00000640101 LRRC9Q6ZRR7 1453 aa17.42■□□□□ 0.38
SPIN3-234ENST00000640101 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
SPIN3-234ENST00000640101 FHOD3Q2V2M9 1422 aa17.41■□□□□ 0.38
SPIN3-234ENST00000640101 RAD54L2Q9Y4B4 1467 aa17.41■□□□□ 0.38
SPIN3-234ENST00000640101 CC2D2AQ9P2K1 1620 aa17.41■□□□□ 0.38
SPIN3-234ENST00000640101 MAPKBP1O60336 1514 aa17.39■□□□□ 0.37
SPIN3-234ENST00000640101 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
SPIN3-234ENST00000640101 DEKP35659 375 aaKnown RBP17.36■□□□□ 0.37
SPIN3-234ENST00000640101 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
SPIN3-234ENST00000640101 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
SPIN3-234ENST00000640101 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
SPIN3-234ENST00000640101 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
SPIN3-234ENST00000640101 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
SPIN3-234ENST00000640101 NESP48681 1621 aa17.32■□□□□ 0.36
SPIN3-234ENST00000640101 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
SPIN3-234ENST00000640101 MAP3K1Q13233 1512 aa17.29■□□□□ 0.36
SPIN3-234ENST00000640101 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
SPIN3-234ENST00000640101 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
SPIN3-234ENST00000640101 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
SPIN3-234ENST00000640101 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
SPIN3-234ENST00000640101 TRIM52Q96A61 297 aa17.25■□□□□ 0.35
SPIN3-234ENST00000640101 DNMBPQ6XZF7 1577 aa17.24■□□□□ 0.35
SPIN3-234ENST00000640101 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
SPIN3-234ENST00000640101 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
SPIN3-234ENST00000640101 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
SPIN3-234ENST00000640101 ARID3CA6NKF2 412 aa17.22■□□□□ 0.35
SPIN3-234ENST00000640101 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
SPIN3-234ENST00000640101 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
SPIN3-234ENST00000640101 CASKIN1Q8WXD9 1431 aa17.2■□□□□ 0.34
SPIN3-234ENST00000640101 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
SPIN3-234ENST00000640101 ANP32CO43423 234 aa17.18■□□□□ 0.34
SPIN3-234ENST00000640101 FYCO1Q9BQS8 1478 aa17.18■□□□□ 0.34
SPIN3-234ENST00000640101 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
SPIN3-234ENST00000640101 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
SPIN3-234ENST00000640101 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
SPIN3-234ENST00000640101 CFAP43Q8NDM7 1665 aa17.16■□□□□ 0.34
SPIN3-234ENST00000640101 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
SPIN3-234ENST00000640101 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
SPIN3-234ENST00000640101 FMN1Q68DA7 1419 aa17.14■□□□□ 0.33
SPIN3-234ENST00000640101 NBR1Q14596 966 aa17.13■□□□□ 0.33
SPIN3-234ENST00000640101 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
SPIN3-234ENST00000640101 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
SPIN3-234ENST00000640101 CCDC18Q5T9S5 1454 aa17.11■□□□□ 0.33
SPIN3-234ENST00000640101 CUL7Q14999 1698 aa17.11■□□□□ 0.33
SPIN3-234ENST00000640101 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
SPIN3-234ENST00000640101 ERICH6BQ5W0A0 696 aa17.08■□□□□ 0.33
SPIN3-234ENST00000640101 CCDC136Q96JN2 1154 aa17.08■□□□□ 0.33
SPIN3-234ENST00000640101 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
SPIN3-234ENST00000640101 CTTNBP2Q8WZ74 1663 aa17.07■□□□□ 0.32
SPIN3-234ENST00000640101 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
SPIN3-234ENST00000640101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
SPIN3-234ENST00000640101 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
SPIN3-234ENST00000640101 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
SPIN3-234ENST00000640101 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
SPIN3-234ENST00000640101 FOXD1Q16676 465 aa17.05■□□□□ 0.32
SPIN3-234ENST00000640101 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
SPIN3-234ENST00000640101 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
SPIN3-234ENST00000640101 NAIPQ13075 1403 aa17.04■□□□□ 0.32
SPIN3-234ENST00000640101 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
SPIN3-234ENST00000640101 NOP58Q9Y2X3 529 aaKnown RBP17.03■□□□□ 0.32
SPIN3-234ENST00000640101 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.32
SPIN3-234ENST00000640101 ABCA5Q8WWZ7 1642 aa17■□□□□ 0.31
SPIN3-234ENST00000640101 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
SPIN3-234ENST00000640101 PTPN23Q9H3S7 1636 aa16.98■□□□□ 0.31
SPIN3-234ENST00000640101 PDS5BQ9NTI5 1447 aa16.98■□□□□ 0.31
SPIN3-234ENST00000640101 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
SPIN3-234ENST00000640101 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
SPIN3-234ENST00000640101 RTN4Q9NQC3 1192 aaKnown RBP16.97■□□□□ 0.31
SPIN3-234ENST00000640101 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
SPIN3-234ENST00000640101 SAMD9Q5K651 1589 aa16.96■□□□□ 0.31
SPIN3-234ENST00000640101 IL27Q8NEV9 243 aa16.96■□□□□ 0.31
SPIN3-234ENST00000640101 LRRIQ1Q96JM4 1722 aa16.96■□□□□ 0.31
SPIN3-234ENST00000640101 RTL5Q5HYW3 569 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-234ENST00000640101 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-234ENST00000640101 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
SPIN3-234ENST00000640101 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
SPIN3-234ENST00000640101 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
SPIN3-234ENST00000640101 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
SPIN3-234ENST00000640101 WASHC2AQ641Q2 1341 aa16.93■□□□□ 0.3
SPIN3-234ENST00000640101 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
SPIN3-234ENST00000640101 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
SPIN3-234ENST00000640101 UBE2Q2Q8WVN8 375 aa16.9■□□□□ 0.3
SPIN3-234ENST00000640101 SUPT6HQ7KZ85 1726 aaKnown RBP16.9■□□□□ 0.3
SPIN3-234ENST00000640101 EIF4G2P78344 907 aaKnown RBP eCLIP16.9■□□□□ 0.3
SPIN3-234ENST00000640101 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms