RNA–Protein interactions for RNA: ENST00000640101.1

SPIN3-234, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-234ENST00000640101 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
SPIN3-234ENST00000640101 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
SPIN3-234ENST00000640101 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
SPIN3-234ENST00000640101 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
SPIN3-234ENST00000640101 CCDC180Q9P1Z9 1646 aa20.8■□□□□ 0.92
SPIN3-234ENST00000640101 HRCP23327 699 aa20.79■□□□□ 0.92
SPIN3-234ENST00000640101 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
SPIN3-234ENST00000640101 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
SPIN3-234ENST00000640101 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
SPIN3-234ENST00000640101 PPARGC1BQ86YN6 1023 aaKnown RBP20.38■□□□□ 0.85
SPIN3-234ENST00000640101 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
SPIN3-234ENST00000640101 PCGF6Q9BYE7 350 aa20.28■□□□□ 0.84
SPIN3-234ENST00000640101 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
SPIN3-234ENST00000640101 LOC105371045A0A1W2PR82 267 aa20.01■□□□□ 0.79
SPIN3-234ENST00000640101 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
SPIN3-234ENST00000640101 MYT1Q01538 1121 aa19.8■□□□□ 0.76
SPIN3-234ENST00000640101 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
SPIN3-234ENST00000640101 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
SPIN3-234ENST00000640101 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
SPIN3-234ENST00000640101 RSF1Q96T23 1441 aaPredicted RBP19.56■□□□□ 0.72
SPIN3-234ENST00000640101 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
SPIN3-234ENST00000640101 ABCC9O60706 1549 aa19.56■□□□□ 0.72
SPIN3-234ENST00000640101 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
SPIN3-234ENST00000640101 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
SPIN3-234ENST00000640101 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
SPIN3-234ENST00000640101 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
SPIN3-234ENST00000640101 ACIN1Q9UKV3 1341 aaKnown RBP19.27■□□□□ 0.68
SPIN3-234ENST00000640101 NACADO15069 1562 aa19.26■□□□□ 0.67
SPIN3-234ENST00000640101 NEUROD1Q13562 356 aa19.21■□□□□ 0.67
SPIN3-234ENST00000640101 MROH2BQ7Z745 1585 aa19.17■□□□□ 0.66
SPIN3-234ENST00000640101 GTF3C3Q9Y5Q9 886 aa19.16■□□□□ 0.66
SPIN3-234ENST00000640101 WIZO95785 1651 aa19.06■□□□□ 0.64
SPIN3-234ENST00000640101 CENPBP07199 599 aaPredicted RBP19.02■□□□□ 0.64
SPIN3-234ENST00000640101 TTBK1Q5TCY1 1321 aaPredicted RBP18.96■□□□□ 0.63
SPIN3-234ENST00000640101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.87■□□□□ 0.61
SPIN3-234ENST00000640101 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
SPIN3-234ENST00000640101 DIEXFQ68CQ4 756 aaKnown RBP18.81■□□□□ 0.6
SPIN3-234ENST00000640101 CCER1Q8TC90 406 aaPredicted RBP18.78■□□□□ 0.6
SPIN3-234ENST00000640101 ABCC8Q09428 1581 aa18.77■□□□□ 0.6
SPIN3-234ENST00000640101 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.59
SPIN3-234ENST00000640101 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
SPIN3-234ENST00000640101 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
SPIN3-234ENST00000640101 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
SPIN3-234ENST00000640101 UNC13AQ9UPW8 1703 aa18.68■□□□□ 0.58
SPIN3-234ENST00000640101 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
SPIN3-234ENST00000640101 SOGA1O94964 1423 aa18.66■□□□□ 0.58
SPIN3-234ENST00000640101 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
SPIN3-234ENST00000640101 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.57
SPIN3-234ENST00000640101 YTHDC1Q96MU7 727 aaKnown RBP18.58■□□□□ 0.57
SPIN3-234ENST00000640101 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
SPIN3-234ENST00000640101 RUSC2Q8N2Y8 1516 aa18.57■□□□□ 0.56
SPIN3-234ENST00000640101 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
SPIN3-234ENST00000640101 BCL11AQ9H165 835 aa18.51■□□□□ 0.55
SPIN3-234ENST00000640101 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
SPIN3-234ENST00000640101 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
SPIN3-234ENST00000640101 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.55
SPIN3-234ENST00000640101 WRNQ14191 1432 aaPredicted RBP eCLIP18.42■□□□□ 0.54
SPIN3-234ENST00000640101 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.54
SPIN3-234ENST00000640101 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
SPIN3-234ENST00000640101 ANP32EQ9BTT0 268 aa18.34■□□□□ 0.53
SPIN3-234ENST00000640101 EEA1Q15075 1411 aa18.33■□□□□ 0.52
SPIN3-234ENST00000640101 GOLGA3Q08378 1498 aa18.32■□□□□ 0.52
SPIN3-234ENST00000640101 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
SPIN3-234ENST00000640101 MIER1Q8N108 512 aa18.28■□□□□ 0.52
SPIN3-234ENST00000640101 APLP2Q06481 763 aa18.24■□□□□ 0.51
SPIN3-234ENST00000640101 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
SPIN3-234ENST00000640101 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
SPIN3-234ENST00000640101 CLIP1P30622 1438 aa18.21■□□□□ 0.51
SPIN3-234ENST00000640101 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
SPIN3-234ENST00000640101 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
SPIN3-234ENST00000640101 RAPGEF2Q9Y4G8 1499 aa18.15■□□□□ 0.5
SPIN3-234ENST00000640101 TSHZ2Q9NRE2 1034 aa18.14■□□□□ 0.49
SPIN3-234ENST00000640101 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
SPIN3-234ENST00000640101 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
SPIN3-234ENST00000640101 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
SPIN3-234ENST00000640101 KIF21BO75037 1637 aa18.04■□□□□ 0.48
SPIN3-234ENST00000640101 KANK4Q5T7N3 995 aaPredicted RBP17.98■□□□□ 0.47
SPIN3-234ENST00000640101 ITGAEP38570 1179 aa17.94■□□□□ 0.46
SPIN3-234ENST00000640101 PRKCSHP14314 528 aaPredicted RBP17.93■□□□□ 0.46
SPIN3-234ENST00000640101 TOP2BQ02880 1626 aa17.92■□□□□ 0.46
SPIN3-234ENST00000640101 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
SPIN3-234ENST00000640101 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
SPIN3-234ENST00000640101 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
SPIN3-234ENST00000640101 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
SPIN3-234ENST00000640101 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
SPIN3-234ENST00000640101 CUX1P39880 1505 aa17.8■□□□□ 0.44
SPIN3-234ENST00000640101 KIF27Q86VH2 1401 aa17.79■□□□□ 0.44
SPIN3-234ENST00000640101 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
SPIN3-234ENST00000640101 BCANQ96GW7 911 aa17.78■□□□□ 0.44
SPIN3-234ENST00000640101 ATP1B4Q9UN42 357 aaPredicted RBP17.74■□□□□ 0.43
SPIN3-234ENST00000640101 ERICH3Q5RHP9 1530 aa17.73■□□□□ 0.43
SPIN3-234ENST00000640101 CFTRP13569 1480 aa17.73■□□□□ 0.43
SPIN3-234ENST00000640101 P3H3Q8IVL6 736 aa17.72■□□□□ 0.43
SPIN3-234ENST00000640101 RBM19Q9Y4C8 960 aaKnown RBP17.7■□□□□ 0.42
SPIN3-234ENST00000640101 ARHGAP35Q9NRY4 1499 aa17.67■□□□□ 0.42
SPIN3-234ENST00000640101 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
SPIN3-234ENST00000640101 CUX2O14529 1486 aa17.66■□□□□ 0.42
SPIN3-234ENST00000640101 FKBP8Q14318 412 aa17.63■□□□□ 0.41
SPIN3-234ENST00000640101 IGF1RP08069 1367 aa17.63■□□□□ 0.41
SPIN3-234ENST00000640101 FAM50AQ14320 339 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms