RNA–Protein interactions for RNA: ENST00000640041.1

TCEA1-213, Transcript of transcription elongation factor A1, humanhuman

TSL 5 BASIC

Gene TCEA1, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-213ENST00000640041 JPH4Q96JJ6 628 aa40.7■■■■■ 4.11
TCEA1-213ENST00000640041 PRG4Q92954 1404 aaPredicted RBP40.66■■■■■ 4.1
TCEA1-213ENST00000640041 KIAA0586Q9BVV6 1533 aa40.64■■■■■ 4.1
TCEA1-213ENST00000640041 RAPGEF2Q9Y4G8 1499 aa40.55■■■■■ 4.08
TCEA1-213ENST00000640041 IQGAP2Q13576 1575 aa40.38■■■■■ 4.05
TCEA1-213ENST00000640041 PRXQ9BXM0 1461 aa40.34■■■■■ 4.05
TCEA1-213ENST00000640041 TRHP20396 242 aaPredicted RBP40.34■■■■■ 4.05
TCEA1-213ENST00000640041 CHIC1Q5VXU3 224 aa40.29■■■■■ 4.04
TCEA1-213ENST00000640041 CSRNP3Q8WYN3 585 aa40.27■■■■■ 4.04
TCEA1-213ENST00000640041 CARMIL2Q6F5E8 1435 aa40.23■■■■■ 4.03
TCEA1-213ENST00000640041 EEA1Q15075 1411 aa40.21■■■■■ 4.03
TCEA1-213ENST00000640041 FAM9AQ8IZU1 332 aaPredicted RBP40.17■■■■■ 4.02
TCEA1-213ENST00000640041 TTBK1Q5TCY1 1321 aaPredicted RBP40.16■■■■■ 4.02
TCEA1-213ENST00000640041 CTTNBP2Q8WZ74 1663 aa40.15■■■■■ 4.02
TCEA1-213ENST00000640041 UGGT2Q9NYU1 1516 aa40.14■■■■■ 4.02
TCEA1-213ENST00000640041 DISP1Q96F81 1524 aa40.13■■■■■ 4.01
TCEA1-213ENST00000640041 PTPRGP23470 1445 aa40.13■■■■■ 4.01
TCEA1-213ENST00000640041 TNIKQ9UKE5 1360 aa40.12■■■■■ 4.01
TCEA1-213ENST00000640041 ADCY10Q96PN6 1610 aa40.05■■■■■ 4
TCEA1-213ENST00000640041 NPM1P06748 294 aaKnown RBP eCLIP40■■■■□ 3.99
TCEA1-213ENST00000640041 KIAA0556O60303 1618 aa40■■■■□ 3.99
TCEA1-213ENST00000640041 GOLGA3Q08378 1498 aa39.9■■■■□ 3.98
TCEA1-213ENST00000640041 UACAQ9BZF9 1416 aa39.84■■■■□ 3.97
TCEA1-213ENST00000640041 KIF21BO75037 1637 aa39.83■■■■□ 3.97
TCEA1-213ENST00000640041 MAPKBP1O60336 1514 aa39.82■■■■□ 3.97
TCEA1-213ENST00000640041 UHRF1BP1LA0JNW5 1464 aa39.79■■■■□ 3.96
TCEA1-213ENST00000640041 ABCC2Q92887 1545 aa39.78■■■■□ 3.96
TCEA1-213ENST00000640041 EHMT2Q96KQ7 1210 aa39.73■■■■□ 3.95
TCEA1-213ENST00000640041 P3H3Q8IVL6 736 aa39.72■■■■□ 3.95
TCEA1-213ENST00000640041 ABCC10Q5T3U5 1492 aa39.69■■■■□ 3.94
TCEA1-213ENST00000640041 KIF13AQ9H1H9 1805 aa39.69■■■■□ 3.94
TCEA1-213ENST00000640041 RANGAP1P46060 587 aaPredicted RBP39.68■■■■□ 3.94
TCEA1-213ENST00000640041 PLB1Q6P1J6 1458 aa39.67■■■■□ 3.94
TCEA1-213ENST00000640041 FAM69CQ0P6D2 419 aa39.66■■■■□ 3.94
TCEA1-213ENST00000640041 SAMD9Q5K651 1589 aa39.63■■■■□ 3.94
TCEA1-213ENST00000640041 DIP2BQ9P265 1576 aa39.62■■■■□ 3.93
TCEA1-213ENST00000640041 KDM5BQ9UGL1 1544 aa39.61■■■■□ 3.93
TCEA1-213ENST00000640041 ASXL2Q76L83 1435 aa39.58■■■■□ 3.93
TCEA1-213ENST00000640041 UBTFP17480 764 aaKnown RBP39.58■■■■□ 3.93
TCEA1-213ENST00000640041 ABCA8O94911 1581 aa39.58■■■■□ 3.93
TCEA1-213ENST00000640041 ZCCHC11Q5TAX3 1644 aaKnown RBP39.54■■■■□ 3.92
TCEA1-213ENST00000640041 FHOD3Q2V2M9 1422 aa39.46■■■■□ 3.91
TCEA1-213ENST00000640041 EFCAB5A4FU69 1503 aa39.4■■■■□ 3.9
TCEA1-213ENST00000640041 ARID3CA6NKF2 412 aa39.37■■■■□ 3.89
TCEA1-213ENST00000640041 EPRSP07814 1512 aaKnown RBP39.33■■■■□ 3.89
TCEA1-213ENST00000640041 GLI2P10070 1586 aa39.33■■■■□ 3.89
TCEA1-213ENST00000640041 RAPGEF6Q8TEU7 1601 aa39.32■■■■□ 3.89
TCEA1-213ENST00000640041 WDR7Q9Y4E6 1490 aa39.32■■■■□ 3.89
TCEA1-213ENST00000640041 TSPOAP1O95153 1857 aa39.29■■■■□ 3.88
TCEA1-213ENST00000640041 ATP10BO94823 1461 aa39.27■■■■□ 3.88
TCEA1-213ENST00000640041 ARHGAP35Q9NRY4 1499 aa39.21■■■■□ 3.87
TCEA1-213ENST00000640041 KCNH8Q96L42 1107 aa39.2■■■■□ 3.87
TCEA1-213ENST00000640041 NUP153P49790 1475 aaKnown RBP39.19■■■■□ 3.86
TCEA1-213ENST00000640041 MAP3K4Q9Y6R4 1608 aa39.15■■■■□ 3.86
TCEA1-213ENST00000640041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.15■■■■□ 3.86
TCEA1-213ENST00000640041 HNRNPUL2Q1KMD3 747 aaKnown RBP39.15■■■■□ 3.86
TCEA1-213ENST00000640041 PPRC1Q5VV67 1664 aaKnown RBP39.13■■■■□ 3.85
TCEA1-213ENST00000640041 KDM6BO15054 1643 aa39.07■■■■□ 3.85
TCEA1-213ENST00000640041 FMN1Q68DA7 1419 aa39.06■■■■□ 3.84
TCEA1-213ENST00000640041 CD109Q6YHK3 1445 aa39■■■■□ 3.83
TCEA1-213ENST00000640041 TEX14Q8IWB6 1497 aa38.99■■■■□ 3.83
TCEA1-213ENST00000640041 ATP1B4Q9UN42 357 aaPredicted RBP38.99■■■■□ 3.83
TCEA1-213ENST00000640041 CFAP43Q8NDM7 1665 aa38.99■■■■□ 3.83
TCEA1-213ENST00000640041 CDK13Q14004 1512 aaKnown RBP38.93■■■■□ 3.82
TCEA1-213ENST00000640041 PLEKHD1A6NEE1 506 aa38.92■■■■□ 3.82
TCEA1-213ENST00000640041 MAGI3Q5TCQ9 1506 aa38.91■■■■□ 3.82
TCEA1-213ENST00000640041 HECW1Q76N89 1606 aa38.91■■■■□ 3.82
TCEA1-213ENST00000640041 CLIP1P30622 1438 aa38.9■■■■□ 3.82
TCEA1-213ENST00000640041 ABCA9Q8IUA7 1624 aa38.86■■■■□ 3.81
TCEA1-213ENST00000640041 COL17A1Q9UMD9 1497 aaPredicted RBP38.83■■■■□ 3.81
TCEA1-213ENST00000640041 PCF11O94913 1555 aaKnown RBP38.75■■■■□ 3.79
TCEA1-213ENST00000640041 CASKIN1Q8WXD9 1431 aa38.73■■■■□ 3.79
TCEA1-213ENST00000640041 LOC105371045A0A1W2PR82 267 aa38.7■■■■□ 3.79
TCEA1-213ENST00000640041 LRRIQ1Q96JM4 1722 aa38.69■■■■□ 3.78
TCEA1-213ENST00000640041 CDK11AQ9UQ88 783 aaPredicted RBP38.68■■■■□ 3.78
TCEA1-213ENST00000640041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.68■■■■□ 3.784e-8■■■■■ 52.5
TCEA1-213ENST00000640041 CEP162Q5TB80 1403 aa38.66■■■■□ 3.78
TCEA1-213ENST00000640041 TTC37Q6PGP7 1564 aa38.63■■■■□ 3.77
TCEA1-213ENST00000640041 FYCO1Q9BQS8 1478 aa38.62■■■■□ 3.77
TCEA1-213ENST00000640041 CCDC18Q5T9S5 1454 aa38.6■■■■□ 3.77
TCEA1-213ENST00000640041 NEO1Q92859 1461 aa38.58■■■■□ 3.77
TCEA1-213ENST00000640041 ARAP3Q8WWN8 1544 aa38.58■■■■□ 3.77
TCEA1-213ENST00000640041 TROQ12816 1431 aaPredicted RBP38.57■■■■□ 3.77
TCEA1-213ENST00000640041 PHLDB1Q86UU1 1377 aa38.57■■■■□ 3.76
TCEA1-213ENST00000640041 KIF14Q15058 1648 aa38.51■■■■□ 3.76
TCEA1-213ENST00000640041 FANCAO15360 1455 aa38.48■■■■□ 3.75
TCEA1-213ENST00000640041 AEBP2Q6ZN18 517 aaPredicted RBP38.47■■■■□ 3.75
TCEA1-213ENST00000640041 RAPGEF3O95398 923 aa38.44■■■■□ 3.74
TCEA1-213ENST00000640041 PLCH2O75038 1416 aa38.44■■■■□ 3.74
TCEA1-213ENST00000640041 AKNAQ7Z591 1439 aa38.43■■■■□ 3.74
TCEA1-213ENST00000640041 CFAP74Q9C0B2 1584 aa38.43■■■■□ 3.74
TCEA1-213ENST00000640041 MYO5CQ9NQX4 1742 aa38.37■■■■□ 3.73
TCEA1-213ENST00000640041 FRMPD1Q5SYB0 1578 aa38.34■■■■□ 3.73
TCEA1-213ENST00000640041 DENND4BO75064 1496 aaPredicted RBP38.34■■■■□ 3.73
TCEA1-213ENST00000640041 KDM4FA0A1W2PPD8 638 aa38.32■■■■□ 3.72
TCEA1-213ENST00000640041 EFCAB2Q5VUJ9 269 aa38.31■■■■□ 3.72
TCEA1-213ENST00000640041 ADGRL1O94910 1474 aa38.28■■■■□ 3.72
TCEA1-213ENST00000640041 ARHGAP5Q13017 1502 aa38.28■■■■□ 3.72
TCEA1-213ENST00000640041 SCAPERQ9BY12 1400 aa38.24■■■■□ 3.71
TCEA1-213ENST00000640041 RICTORQ6R327 1708 aa38.24■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms