RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 FAM9AQ8IZU1 332 aaPredicted RBP28.29■■■□□ 2.12
SPIN3-228ENST00000639794 SHROOM2Q13796 1616 aa28.26■■■□□ 2.11
SPIN3-228ENST00000639794 JPH4Q96JJ6 628 aa28.26■■■□□ 2.11
SPIN3-228ENST00000639794 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
SPIN3-228ENST00000639794 PRG4Q92954 1404 aaPredicted RBP28.22■■■□□ 2.11
SPIN3-228ENST00000639794 KIAA0586Q9BVV6 1533 aa28.2■■■□□ 2.1
SPIN3-228ENST00000639794 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.1
SPIN3-228ENST00000639794 PRXQ9BXM0 1461 aa28.1■■■□□ 2.09
SPIN3-228ENST00000639794 IQGAP2Q13576 1575 aa28.1■■■□□ 2.09
SPIN3-228ENST00000639794 TTBK1Q5TCY1 1321 aaPredicted RBP28.09■■■□□ 2.09
SPIN3-228ENST00000639794 EHMT2Q96KQ7 1210 aa28.06■■■□□ 2.08
SPIN3-228ENST00000639794 EEA1Q15075 1411 aa28.05■■■□□ 2.08
SPIN3-228ENST00000639794 CTTNBP2Q8WZ74 1663 aa28.04■■■□□ 2.08
SPIN3-228ENST00000639794 CARMIL2Q6F5E8 1435 aa27.93■■■□□ 2.06
SPIN3-228ENST00000639794 TRHP20396 242 aaPredicted RBP27.91■■■□□ 2.06
SPIN3-228ENST00000639794 RANGAP1P46060 587 aaPredicted RBP27.89■■■□□ 2.06
SPIN3-228ENST00000639794 DISP1Q96F81 1524 aa27.89■■■□□ 2.05
SPIN3-228ENST00000639794 UGGT2Q9NYU1 1516 aa27.88■■■□□ 2.05
SPIN3-228ENST00000639794 PTPRGP23470 1445 aa27.86■■■□□ 2.05
SPIN3-228ENST00000639794 TNIKQ9UKE5 1360 aa27.85■■■□□ 2.05
SPIN3-228ENST00000639794 KIAA0556O60303 1618 aa27.84■■■□□ 2.05
SPIN3-228ENST00000639794 KIF21BO75037 1637 aa27.84■■■□□ 2.05
SPIN3-228ENST00000639794 P3H3Q8IVL6 736 aa27.79■■■□□ 2.04
SPIN3-228ENST00000639794 ADCY10Q96PN6 1610 aa27.79■■■□□ 2.04
SPIN3-228ENST00000639794 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
SPIN3-228ENST00000639794 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
SPIN3-228ENST00000639794 NPM1P06748 294 aaKnown RBP eCLIP27.72■■■□□ 2.03
SPIN3-228ENST00000639794 UACAQ9BZF9 1416 aa27.64■■■□□ 2.02
SPIN3-228ENST00000639794 PLB1Q6P1J6 1458 aa27.61■■■□□ 2.01
SPIN3-228ENST00000639794 SAMD9Q5K651 1589 aa27.61■■■□□ 2.01
SPIN3-228ENST00000639794 ABCC2Q92887 1545 aa27.59■■■□□ 2.01
SPIN3-228ENST00000639794 FHOD3Q2V2M9 1422 aa27.56■■■□□ 2
SPIN3-228ENST00000639794 ARID3CA6NKF2 412 aa27.56■■■□□ 2
SPIN3-228ENST00000639794 UHRF1BP1LA0JNW5 1464 aa27.54■■■□□ 2
SPIN3-228ENST00000639794 KIF13AQ9H1H9 1805 aa27.52■■■□□ 2
SPIN3-228ENST00000639794 MAPKBP1O60336 1514 aa27.52■■■□□ 2
SPIN3-228ENST00000639794 ZCCHC11Q5TAX3 1644 aaKnown RBP27.5■■□□□ 1.99
SPIN3-228ENST00000639794 ABCA8O94911 1581 aa27.5■■□□□ 1.99
SPIN3-228ENST00000639794 FAM69CQ0P6D2 419 aa27.49■■□□□ 1.99
SPIN3-228ENST00000639794 EFCAB5A4FU69 1503 aa27.45■■□□□ 1.99
SPIN3-228ENST00000639794 ASXL2Q76L83 1435 aa27.45■■□□□ 1.99
SPIN3-228ENST00000639794 KDM5BQ9UGL1 1544 aa27.45■■□□□ 1.98
SPIN3-228ENST00000639794 ABCC10Q5T3U5 1492 aa27.43■■□□□ 1.98
SPIN3-228ENST00000639794 DIP2BQ9P265 1576 aa27.43■■□□□ 1.98
SPIN3-228ENST00000639794 RAPGEF6Q8TEU7 1601 aa27.4■■□□□ 1.98
SPIN3-228ENST00000639794 ARHGAP35Q9NRY4 1499 aa27.39■■□□□ 1.97
SPIN3-228ENST00000639794 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
SPIN3-228ENST00000639794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
SPIN3-228ENST00000639794 HNRNPUL2Q1KMD3 747 aaKnown RBP27.35■■□□□ 1.97
SPIN3-228ENST00000639794 ATP1B4Q9UN42 357 aaPredicted RBP27.33■■□□□ 1.97
SPIN3-228ENST00000639794 LOC105371045A0A1W2PR82 267 aa27.31■■□□□ 1.96
SPIN3-228ENST00000639794 KCNH8Q96L42 1107 aa27.3■■□□□ 1.96
SPIN3-228ENST00000639794 ATP10BO94823 1461 aa27.3■■□□□ 1.96
SPIN3-228ENST00000639794 NUP153P49790 1475 aaKnown RBP27.28■■□□□ 1.96
SPIN3-228ENST00000639794 WDR7Q9Y4E6 1490 aa27.28■■□□□ 1.96
SPIN3-228ENST00000639794 EPRSP07814 1512 aaKnown RBP27.26■■□□□ 1.95
SPIN3-228ENST00000639794 CLIP1P30622 1438 aa27.24■■□□□ 1.95
SPIN3-228ENST00000639794 FMN1Q68DA7 1419 aa27.22■■□□□ 1.95
SPIN3-228ENST00000639794 CDK13Q14004 1512 aaKnown RBP27.18■■□□□ 1.94
SPIN3-228ENST00000639794 GLI2P10070 1586 aa27.18■■□□□ 1.94
SPIN3-228ENST00000639794 HECW1Q76N89 1606 aa27.14■■□□□ 1.94
SPIN3-228ENST00000639794 MAP3K4Q9Y6R4 1608 aa27.13■■□□□ 1.93
SPIN3-228ENST00000639794 CEP162Q5TB80 1403 aa27.13■■□□□ 1.93
SPIN3-228ENST00000639794 PPRC1Q5VV67 1664 aaKnown RBP27.12■■□□□ 1.93
SPIN3-228ENST00000639794 PCF11O94913 1555 aaKnown RBP27.11■■□□□ 1.93
SPIN3-228ENST00000639794 PLEKHD1A6NEE1 506 aa27.08■■□□□ 1.93
SPIN3-228ENST00000639794 LRRIQ1Q96JM4 1722 aa27.08■■□□□ 1.93
SPIN3-228ENST00000639794 CD109Q6YHK3 1445 aa27.06■■□□□ 1.92
SPIN3-228ENST00000639794 CFAP43Q8NDM7 1665 aa27.05■■□□□ 1.92
SPIN3-228ENST00000639794 KDM6BO15054 1643 aa27.03■■□□□ 1.92
SPIN3-228ENST00000639794 CASKIN1Q8WXD9 1431 aa27.01■■□□□ 1.91
SPIN3-228ENST00000639794 TEX14Q8IWB6 1497 aa26.98■■□□□ 1.91
SPIN3-228ENST00000639794 ABCA9Q8IUA7 1624 aa26.97■■□□□ 1.91
SPIN3-228ENST00000639794 FYCO1Q9BQS8 1478 aa26.95■■□□□ 1.9
SPIN3-228ENST00000639794 CDK11AQ9UQ88 783 aaPredicted RBP26.93■■□□□ 1.9
SPIN3-228ENST00000639794 MAGI3Q5TCQ9 1506 aa26.91■■□□□ 1.9
SPIN3-228ENST00000639794 TTC37Q6PGP7 1564 aa26.91■■□□□ 1.9
SPIN3-228ENST00000639794 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.9■■□□□ 1.9
SPIN3-228ENST00000639794 CCDC18Q5T9S5 1454 aa26.9■■□□□ 1.9
SPIN3-228ENST00000639794 COL17A1Q9UMD9 1497 aaPredicted RBP26.89■■□□□ 1.89
SPIN3-228ENST00000639794 KIF14Q15058 1648 aa26.88■■□□□ 1.89
SPIN3-228ENST00000639794 TROQ12816 1431 aaPredicted RBP26.85■■□□□ 1.89
SPIN3-228ENST00000639794 MYO5CQ9NQX4 1742 aa26.76■■□□□ 1.87
SPIN3-228ENST00000639794 FANCAO15360 1455 aa26.75■■□□□ 1.87
SPIN3-228ENST00000639794 VPS8Q8N3P4 1428 aa26.75■■□□□ 1.87
SPIN3-228ENST00000639794 RAPGEF3O95398 923 aa26.72■■□□□ 1.87
SPIN3-228ENST00000639794 MTUS2Q5JR59 1369 aa26.72■■□□□ 1.87
SPIN3-228ENST00000639794 NEO1Q92859 1461 aa26.71■■□□□ 1.87
SPIN3-228ENST00000639794 PLCH2O75038 1416 aa26.69■■□□□ 1.86
SPIN3-228ENST00000639794 AKNAQ7Z591 1439 aa26.68■■□□□ 1.86
SPIN3-228ENST00000639794 ARAP3Q8WWN8 1544 aa26.68■■□□□ 1.86
SPIN3-228ENST00000639794 CFAP74Q9C0B2 1584 aa26.68■■□□□ 1.86
SPIN3-228ENST00000639794 ARHGAP5Q13017 1502 aa26.67■■□□□ 1.86
SPIN3-228ENST00000639794 CDC42BPBQ9Y5S2 1711 aa26.64■■□□□ 1.86
SPIN3-228ENST00000639794 PHLDB1Q86UU1 1377 aa26.64■■□□□ 1.85
SPIN3-228ENST00000639794 EFCAB2Q5VUJ9 269 aa26.63■■□□□ 1.85
SPIN3-228ENST00000639794 CDC42BPAQ5VT25 1732 aa26.62■■□□□ 1.85
SPIN3-228ENST00000639794 TIAM1Q13009 1591 aa26.61■■□□□ 1.85
SPIN3-228ENST00000639794 ADGRL1O94910 1474 aa26.61■■□□□ 1.85
SPIN3-228ENST00000639794 PREX2Q70Z35 1606 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms