RNA–Protein interactions for RNA: ENST00000639596.1

MED17-220, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 2,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-220ENST00000639596 CEP170Q5SW79 1584 aa31.53■■■□□ 2.64
MED17-220ENST00000639596 NUP160Q12769 1436 aa31.5■■■□□ 2.63
MED17-220ENST00000639596 CEP162Q5TB80 1403 aa31.45■■■□□ 2.62
MED17-220ENST00000639596 RANGAP1P46060 587 aaPredicted RBP31.4■■■□□ 2.62
MED17-220ENST00000639596 KIAA0586Q9BVV6 1533 aa31.4■■■□□ 2.62
MED17-220ENST00000639596 IQGAP2Q13576 1575 aa31.39■■■□□ 2.62
MED17-220ENST00000639596 CLIP1P30622 1438 aa31.34■■■□□ 2.61
MED17-220ENST00000639596 CLASP1Q7Z460 1538 aa31.27■■■□□ 2.6
MED17-220ENST00000639596 ARHGAP35Q9NRY4 1499 aa31.26■■■□□ 2.6
MED17-220ENST00000639596 UGGT2Q9NYU1 1516 aa31.24■■■□□ 2.59
MED17-220ENST00000639596 SAMD9Q5K651 1589 aa31.2■■■□□ 2.59
MED17-220ENST00000639596 JPH4Q96JJ6 628 aa31.18■■■□□ 2.58
MED17-220ENST00000639596 OSCARQ8IYS5 282 aa31.18■■■□□ 2.58
MED17-220ENST00000639596 EFCAB5A4FU69 1503 aa31.17■■■□□ 2.58
MED17-220ENST00000639596 ARAP1Q96P48 1450 aa31.17■■■□□ 2.58
MED17-220ENST00000639596 SHROOM2Q13796 1616 aa31.16■■■□□ 2.58
MED17-220ENST00000639596 DISP1Q96F81 1524 aa31.15■■■□□ 2.58
MED17-220ENST00000639596 P3H3Q8IVL6 736 aa31.13■■■□□ 2.57
MED17-220ENST00000639596 FHOD3Q2V2M9 1422 aa31.1■■■□□ 2.57
MED17-220ENST00000639596 KIAA0556O60303 1618 aa31.09■■■□□ 2.57
MED17-220ENST00000639596 PRG4Q92954 1404 aaPredicted RBP31.06■■■□□ 2.56
MED17-220ENST00000639596 ERCC6L2Q5T890 1561 aa31.03■■■□□ 2.56
MED17-220ENST00000639596 DNAJC5Q9H3Z4 198 aa30.98■■■□□ 2.55
MED17-220ENST00000639596 CARMIL2Q6F5E8 1435 aa30.98■■■□□ 2.55
MED17-220ENST00000639596 VPS8Q8N3P4 1428 aa30.98■■■□□ 2.55
MED17-220ENST00000639596 TTBK1Q5TCY1 1321 aaPredicted RBP30.87■■■□□ 2.53
MED17-220ENST00000639596 FMN1Q68DA7 1419 aa30.86■■■□□ 2.53
MED17-220ENST00000639596 PCF11O94913 1555 aaKnown RBP30.84■■■□□ 2.53
MED17-220ENST00000639596 PTPRGP23470 1445 aa30.77■■■□□ 2.52
MED17-220ENST00000639596 CASKIN1Q8WXD9 1431 aa30.76■■■□□ 2.51
MED17-220ENST00000639596 PLB1Q6P1J6 1458 aa30.75■■■□□ 2.51
MED17-220ENST00000639596 ARHGEF11O15085 1522 aa30.74■■■□□ 2.51
MED17-220ENST00000639596 FYCO1Q9BQS8 1478 aa30.73■■■□□ 2.51
MED17-220ENST00000639596 RAPGEF6Q8TEU7 1601 aa30.7■■■□□ 2.5
MED17-220ENST00000639596 ABCA8O94911 1581 aa30.69■■■□□ 2.5
MED17-220ENST00000639596 LRRIQ1Q96JM4 1722 aa30.69■■■□□ 2.5
MED17-220ENST00000639596 ATP1B4Q9UN42 357 aaPredicted RBP30.65■■■□□ 2.5
MED17-220ENST00000639596 RIMBP3CA6NJZ7 1639 aa30.64■■■□□ 2.5
MED17-220ENST00000639596 RIMBP3BA6NNM3 1639 aa30.64■■■□□ 2.5
MED17-220ENST00000639596 RIMBP3Q9UFD9 1639 aa30.64■■■□□ 2.5
MED17-220ENST00000639596 NUP153P49790 1475 aaKnown RBP30.64■■■□□ 2.5
MED17-220ENST00000639596 HECW1Q76N89 1606 aa30.64■■■□□ 2.5
MED17-220ENST00000639596 UACAQ9BZF9 1416 aa30.6■■■□□ 2.49
MED17-220ENST00000639596 EPRSP07814 1512 aaKnown RBP30.56■■■□□ 2.48
MED17-220ENST00000639596 ARID3CA6NKF2 412 aa30.56■■■□□ 2.48
MED17-220ENST00000639596 TIAM1Q13009 1591 aa30.56■■■□□ 2.48
MED17-220ENST00000639596 PPARGC1BQ86YN6 1023 aaKnown RBP30.55■■■□□ 2.48
MED17-220ENST00000639596 CDK13Q14004 1512 aaKnown RBP30.55■■■□□ 2.48
MED17-220ENST00000639596 CFAP43Q8NDM7 1665 aa30.55■■■□□ 2.48
MED17-220ENST00000639596 ABCC2Q92887 1545 aa30.54■■■□□ 2.48
MED17-220ENST00000639596 MAP3K1Q13233 1512 aa30.52■■■□□ 2.48
MED17-220ENST00000639596 APLP2Q06481 763 aa30.52■■■□□ 2.48
MED17-220ENST00000639596 ADCY10Q96PN6 1610 aa30.5■■■□□ 2.47
MED17-220ENST00000639596 KANK4Q5T7N3 995 aaPredicted RBP30.5■■■□□ 2.47
MED17-220ENST00000639596 CCDC18Q5T9S5 1454 aa30.5■■■□□ 2.47
MED17-220ENST00000639596 UHRF1BP1LA0JNW5 1464 aa30.49■■■□□ 2.47
MED17-220ENST00000639596 ATP10BO94823 1461 aa30.46■■■□□ 2.47
MED17-220ENST00000639596 MAGI3Q5TCQ9 1506 aa30.42■■■□□ 2.46
MED17-220ENST00000639596 LRRC9Q6ZRR7 1453 aa30.42■■■□□ 2.46
MED17-220ENST00000639596 CYB5RLQ6IPT4 315 aa30.41■■■□□ 2.46
MED17-220ENST00000639596 KDM5BQ9UGL1 1544 aa30.39■■■□□ 2.46
MED17-220ENST00000639596 ZCCHC11Q5TAX3 1644 aaKnown RBP30.36■■■□□ 2.45
MED17-220ENST00000639596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.36■■■□□ 2.45
MED17-220ENST00000639596 HNRNPUL2Q1KMD3 747 aaKnown RBP30.36■■■□□ 2.45
MED17-220ENST00000639596 MTUS2Q5JR59 1369 aa30.31■■■□□ 2.44
MED17-220ENST00000639596 EHBP1L1Q8N3D4 1523 aa30.29■■■□□ 2.44
MED17-220ENST00000639596 TROQ12816 1431 aaPredicted RBP30.23■■■□□ 2.43
MED17-220ENST00000639596 CDK11AQ9UQ88 783 aaPredicted RBP30.23■■■□□ 2.43
MED17-220ENST00000639596 PLEKHD1A6NEE1 506 aa30.2■■■□□ 2.42
MED17-220ENST00000639596 KIF14Q15058 1648 aa30.18■■■□□ 2.42
MED17-220ENST00000639596 SUPT6HQ7KZ85 1726 aaKnown RBP30.17■■■□□ 2.42
MED17-220ENST00000639596 NCOA2Q15596 1464 aa30.16■■■□□ 2.42
MED17-220ENST00000639596 PHLDB1Q86UU1 1377 aa30.13■■■□□ 2.41
MED17-220ENST00000639596 NPM1P06748 294 aaKnown RBP eCLIP30.13■■■□□ 2.41
MED17-220ENST00000639596 ASXL2Q76L83 1435 aa30.12■■■□□ 2.41
MED17-220ENST00000639596 WDR7Q9Y4E6 1490 aa30.1■■■□□ 2.41
MED17-220ENST00000639596 MAPKBP1O60336 1514 aa30.05■■■□□ 2.4
MED17-220ENST00000639596 ABCC10Q5T3U5 1492 aa30.05■■■□□ 2.4
MED17-220ENST00000639596 KCNH8Q96L42 1107 aa30.04■■■□□ 2.4
MED17-220ENST00000639596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.01■■■□□ 2.4
MED17-220ENST00000639596 TTC37Q6PGP7 1564 aa30.01■■■□□ 2.39
MED17-220ENST00000639596 MYOM3Q5VTT5 1437 aa29.98■■■□□ 2.39
MED17-220ENST00000639596 RRBP1Q9P2E9 1410 aaKnown RBP29.96■■■□□ 2.39
MED17-220ENST00000639596 GPATCH8Q9UKJ3 1502 aaKnown RBP29.95■■■□□ 2.39
MED17-220ENST00000639596 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.39
MED17-220ENST00000639596 CDC42BPAQ5VT25 1732 aa29.95■■■□□ 2.38
MED17-220ENST00000639596 CCNB3Q8WWL7 1395 aa29.94■■■□□ 2.38
MED17-220ENST00000639596 FGD6Q6ZV73 1430 aa29.93■■■□□ 2.38
MED17-220ENST00000639596 ABCA9Q8IUA7 1624 aa29.89■■■□□ 2.38
MED17-220ENST00000639596 ITSN2Q9NZM3 1697 aa29.88■■■□□ 2.37
MED17-220ENST00000639596 PREX2Q70Z35 1606 aa29.86■■■□□ 2.37
MED17-220ENST00000639596 CDC42BPBQ9Y5S2 1711 aa29.86■■■□□ 2.37
MED17-220ENST00000639596 MYO5CQ9NQX4 1742 aa29.85■■■□□ 2.37
MED17-220ENST00000639596 MIA2Q96PC5 1412 aa29.84■■■□□ 2.37
MED17-220ENST00000639596 PTPN23Q9H3S7 1636 aa29.83■■■□□ 2.37
MED17-220ENST00000639596 DIP2BQ9P265 1576 aa29.82■■■□□ 2.36
MED17-220ENST00000639596 PCGF6Q9BYE7 350 aa29.81■■■□□ 2.36
MED17-220ENST00000639596 CFDP1Q9UEE9 299 aaPredicted RBP29.8■■■□□ 2.36
MED17-220ENST00000639596 PLCH2O75038 1416 aa29.79■■■□□ 2.36
MED17-220ENST00000639596 ZNF644Q9H582 1327 aaPredicted RBP29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms