RNA–Protein interactions for RNA: ENST00000639483.1

KCNMA1-260, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-260ENST00000639483 HIRIP3Q9BW71 556 aaPredicted RBP23.16■■□□□ 1.3
KCNMA1-260ENST00000639483 TOP2BQ02880 1626 aa23.14■■□□□ 1.3
KCNMA1-260ENST00000639483 ZNF326Q5BKZ1 582 aaKnown RBP23.14■■□□□ 1.3
KCNMA1-260ENST00000639483 CDK11AQ9UQ88 783 aaPredicted RBP23.13■■□□□ 1.29
KCNMA1-260ENST00000639483 GTF3C3Q9Y5Q9 886 aa23.09■■□□□ 1.29
KCNMA1-260ENST00000639483 KIF21BO75037 1637 aa23.09■■□□□ 1.29
KCNMA1-260ENST00000639483 MIER1Q8N108 512 aa23.09■■□□□ 1.29
KCNMA1-260ENST00000639483 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
KCNMA1-260ENST00000639483 SIN3AQ96ST3 1273 aa23.08■■□□□ 1.29
KCNMA1-260ENST00000639483 PRXQ9BXM0 1461 aa23.03■■□□□ 1.28
KCNMA1-260ENST00000639483 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
KCNMA1-260ENST00000639483 ACIN1Q9UKV3 1341 aaKnown RBP23.01■■□□□ 1.27
KCNMA1-260ENST00000639483 DDX10Q13206 875 aaKnown RBP23■■□□□ 1.27
KCNMA1-260ENST00000639483 TONSLQ96HA7 1378 aa22.99■■□□□ 1.27
KCNMA1-260ENST00000639483 PELP1Q8IZL8 1130 aaKnown RBP22.98■■□□□ 1.27
KCNMA1-260ENST00000639483 ARHGAP35Q9NRY4 1499 aa22.91■■□□□ 1.26
KCNMA1-260ENST00000639483 POLA1P09884 1462 aaPredicted RBP22.9■■□□□ 1.26
KCNMA1-260ENST00000639483 GAPVD1Q14C86 1478 aa22.89■■□□□ 1.26
KCNMA1-260ENST00000639483 TOPBP1Q92547 1522 aa22.89■■□□□ 1.25
KCNMA1-260ENST00000639483 RAB3GAP2Q9H2M9 1393 aa22.89■■□□□ 1.25
KCNMA1-260ENST00000639483 AQRO60306 1485 aaKnown RBP eCLIP22.88■■□□□ 1.25
KCNMA1-260ENST00000639483 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
KCNMA1-260ENST00000639483 NEFLP07196 543 aa22.85■■□□□ 1.25
KCNMA1-260ENST00000639483 FMN1Q68DA7 1419 aa22.84■■□□□ 1.25
KCNMA1-260ENST00000639483 KCNH8Q96L42 1107 aa22.84■■□□□ 1.25
KCNMA1-260ENST00000639483 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
KCNMA1-260ENST00000639483 ANP32CO43423 234 aa22.84■■□□□ 1.25
KCNMA1-260ENST00000639483 CFDP1Q9UEE9 299 aaPredicted RBP22.83■■□□□ 1.24
KCNMA1-260ENST00000639483 PLEKHD1A6NEE1 506 aa22.82■■□□□ 1.24
KCNMA1-260ENST00000639483 SETD5Q9C0A6 1442 aa22.8■■□□□ 1.24
KCNMA1-260ENST00000639483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.78■■□□□ 1.24
KCNMA1-260ENST00000639483 SLC4A1APQ9BWU0 796 aaKnown RBP22.78■■□□□ 1.24
KCNMA1-260ENST00000639483 DHX57Q6P158 1386 aaKnown RBP22.77■■□□□ 1.24
KCNMA1-260ENST00000639483 PHLDB1Q86UU1 1377 aa22.75■■□□□ 1.23
KCNMA1-260ENST00000639483 TSPY4P0CV99 314 aa22.74■■□□□ 1.23
KCNMA1-260ENST00000639483 TSPY10P0CW01 314 aa22.74■■□□□ 1.23
KCNMA1-260ENST00000639483 BIVM-ERCC5R4GMW8 1640 aa22.74■■□□□ 1.23
KCNMA1-260ENST00000639483 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
KCNMA1-260ENST00000639483 FOXD1Q16676 465 aa22.73■■□□□ 1.23
KCNMA1-260ENST00000639483 BCANQ96GW7 911 aa22.73■■□□□ 1.23
KCNMA1-260ENST00000639483 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
KCNMA1-260ENST00000639483 KDM2AQ9Y2K7 1162 aa22.68■■□□□ 1.22
KCNMA1-260ENST00000639483 JPH4Q96JJ6 628 aa22.66■■□□□ 1.22
KCNMA1-260ENST00000639483 LRRC9Q6ZRR7 1453 aa22.64■■□□□ 1.21
KCNMA1-260ENST00000639483 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
KCNMA1-260ENST00000639483 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
KCNMA1-260ENST00000639483 LAMC3Q9Y6N6 1575 aa22.54■■□□□ 1.2
KCNMA1-260ENST00000639483 RGL3Q3MIN7 710 aa22.52■■□□□ 1.2
KCNMA1-260ENST00000639483 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
KCNMA1-260ENST00000639483 CARMIL2Q6F5E8 1435 aa22.52■■□□□ 1.19
KCNMA1-260ENST00000639483 CASKIN1Q8WXD9 1431 aa22.51■■□□□ 1.19
KCNMA1-260ENST00000639483 MRC2Q9UBG0 1479 aa22.51■■□□□ 1.19
KCNMA1-260ENST00000639483 RRBP1Q9P2E9 1410 aaKnown RBP22.51■■□□□ 1.19
KCNMA1-260ENST00000639483 EIF4G2P78344 907 aaKnown RBP eCLIP22.5■■□□□ 1.19
KCNMA1-260ENST00000639483 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
KCNMA1-260ENST00000639483 FGD6Q6ZV73 1430 aa22.47■■□□□ 1.19
KCNMA1-260ENST00000639483 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
KCNMA1-260ENST00000639483 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
KCNMA1-260ENST00000639483 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
KCNMA1-260ENST00000639483 TIAM1Q13009 1591 aa22.45■■□□□ 1.18
KCNMA1-260ENST00000639483 HNRNPUQ00839 825 aaKnown RBP eCLIP22.45■■□□□ 1.18
KCNMA1-260ENST00000639483 PPP1R15AO75807 674 aaPredicted RBP22.44■■□□□ 1.18
KCNMA1-260ENST00000639483 SENP3-EIF4A1A0A087X0R7 540 aa22.43■■□□□ 1.18
KCNMA1-260ENST00000639483 HNRNPMP52272 730 aaKnown RBP eCLIP22.41■■□□□ 1.18
KCNMA1-260ENST00000639483 FYCO1Q9BQS8 1478 aa22.41■■□□□ 1.18
KCNMA1-260ENST00000639483 CHGAP10645 457 aaKnown RBP22.41■■□□□ 1.18
KCNMA1-260ENST00000639483 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
KCNMA1-260ENST00000639483 NCOA2Q15596 1464 aa22.4■■□□□ 1.18
KCNMA1-260ENST00000639483 PCF11O94913 1555 aaKnown RBP22.4■■□□□ 1.18
KCNMA1-260ENST00000639483 CCDC18Q5T9S5 1454 aa22.38■■□□□ 1.17
KCNMA1-260ENST00000639483 PKD2Q13563 968 aa22.38■■□□□ 1.17
KCNMA1-260ENST00000639483 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
KCNMA1-260ENST00000639483 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
KCNMA1-260ENST00000639483 MYOM3Q5VTT5 1437 aa22.37■■□□□ 1.17
KCNMA1-260ENST00000639483 EFCAB5A4FU69 1503 aa22.34■■□□□ 1.17
KCNMA1-260ENST00000639483 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
KCNMA1-260ENST00000639483 FKBP8Q14318 412 aa22.34■■□□□ 1.17
KCNMA1-260ENST00000639483 L3MBTL2Q969R5 705 aa22.34■■□□□ 1.17
KCNMA1-260ENST00000639483 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
KCNMA1-260ENST00000639483 TIMELESSQ9UNS1 1208 aa22.33■■□□□ 1.16
KCNMA1-260ENST00000639483 HSPA5P11021 654 aaKnown RBP22.32■■□□□ 1.16
KCNMA1-260ENST00000639483 MRS2Q9HD23 443 aa22.31■■□□□ 1.16
KCNMA1-260ENST00000639483 PTPRGP23470 1445 aa22.29■■□□□ 1.16
KCNMA1-260ENST00000639483 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
KCNMA1-260ENST00000639483 CDK13Q14004 1512 aaKnown RBP22.27■■□□□ 1.16
KCNMA1-260ENST00000639483 NUP155O75694 1391 aa22.26■■□□□ 1.15
KCNMA1-260ENST00000639483 CUL7Q14999 1698 aa22.26■■□□□ 1.15
KCNMA1-260ENST00000639483 DCAF11Q8TEB1 546 aa22.26■■□□□ 1.15
KCNMA1-260ENST00000639483 CARD11Q9BXL7 1154 aa22.25■■□□□ 1.15
KCNMA1-260ENST00000639483 IRX6P78412 446 aaPredicted RBP22.23■■□□□ 1.15
KCNMA1-260ENST00000639483 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
KCNMA1-260ENST00000639483 ANKRD30AQ9BXX3 1397 aa22.2■■□□□ 1.14
KCNMA1-260ENST00000639483 KIF21AQ7Z4S6 1674 aa22.18■■□□□ 1.14
KCNMA1-260ENST00000639483 IQGAP2Q13576 1575 aa22.18■■□□□ 1.14
KCNMA1-260ENST00000639483 EPRSP07814 1512 aaKnown RBP22.15■■□□□ 1.14
KCNMA1-260ENST00000639483 TMC1Q8TDI8 760 aa22.15■■□□□ 1.14
KCNMA1-260ENST00000639483 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
KCNMA1-260ENST00000639483 KIAA0586Q9BVV6 1533 aa22.14■■□□□ 1.13
KCNMA1-260ENST00000639483 PLB1Q6P1J6 1458 aa22.11■■□□□ 1.13
KCNMA1-260ENST00000639483 ERICH6Q7L0X2 663 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms