RNA–Protein interactions for RNA: ENST00000639483.1

KCNMA1-260, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-260ENST00000639483 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
KCNMA1-260ENST00000639483 DCAF8L2P0C7V8 631 aa29.44■■■□□ 2.3
KCNMA1-260ENST00000639483 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
KCNMA1-260ENST00000639483 SUPT5HO00267 1087 aaKnown RBP28.43■■■□□ 2.14
KCNMA1-260ENST00000639483 EHMT2Q96KQ7 1210 aa26.87■■□□□ 1.89
KCNMA1-260ENST00000639483 ABCC9O60706 1549 aa26.75■■□□□ 1.87
KCNMA1-260ENST00000639483 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
KCNMA1-260ENST00000639483 CCDC180Q9P1Z9 1646 aa26.69■■□□□ 1.86
KCNMA1-260ENST00000639483 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
KCNMA1-260ENST00000639483 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
KCNMA1-260ENST00000639483 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
KCNMA1-260ENST00000639483 LOC105371045A0A1W2PR82 267 aa26.09■■□□□ 1.77
KCNMA1-260ENST00000639483 PCGF6Q9BYE7 350 aa26.08■■□□□ 1.77
KCNMA1-260ENST00000639483 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
KCNMA1-260ENST00000639483 PABPN1Q86U42 306 aaKnown RBP eCLIP26.05■■□□□ 1.76
KCNMA1-260ENST00000639483 TTBK1Q5TCY1 1321 aaPredicted RBP25.82■■□□□ 1.72
KCNMA1-260ENST00000639483 RANGAP1P46060 587 aaPredicted RBP25.64■■□□□ 1.69
KCNMA1-260ENST00000639483 PPARGC1BQ86YN6 1023 aaKnown RBP25.64■■□□□ 1.69
KCNMA1-260ENST00000639483 DCAF1Q9Y4B6 1507 aa25.6■■□□□ 1.69
KCNMA1-260ENST00000639483 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
KCNMA1-260ENST00000639483 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
KCNMA1-260ENST00000639483 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
KCNMA1-260ENST00000639483 NACADO15069 1562 aa25.34■■□□□ 1.65
KCNMA1-260ENST00000639483 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
KCNMA1-260ENST00000639483 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
KCNMA1-260ENST00000639483 APLP2Q06481 763 aa25.2■■□□□ 1.62
KCNMA1-260ENST00000639483 TRIM26Q12899 539 aaPredicted RBP25.17■■□□□ 1.62
KCNMA1-260ENST00000639483 HRCP23327 699 aa25.07■■□□□ 1.6
KCNMA1-260ENST00000639483 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
KCNMA1-260ENST00000639483 CCER1Q8TC90 406 aaPredicted RBP24.93■■□□□ 1.58
KCNMA1-260ENST00000639483 ATP1B4Q9UN42 357 aaPredicted RBP24.87■■□□□ 1.57
KCNMA1-260ENST00000639483 BAZ1AQ9NRL2 1556 aaPredicted RBP24.75■■□□□ 1.55
KCNMA1-260ENST00000639483 CSRNP3Q8WYN3 585 aa24.73■■□□□ 1.55
KCNMA1-260ENST00000639483 WIZO95785 1651 aa24.72■■□□□ 1.55
KCNMA1-260ENST00000639483 ZEB1P37275 1124 aaPredicted RBP24.66■■□□□ 1.54
KCNMA1-260ENST00000639483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
KCNMA1-260ENST00000639483 HNRNPUL2Q1KMD3 747 aaKnown RBP24.63■■□□□ 1.53
KCNMA1-260ENST00000639483 ITGAEP38570 1179 aa24.51■■□□□ 1.51
KCNMA1-260ENST00000639483 CCDC88BA6NC98 1476 aa24.49■■□□□ 1.51
KCNMA1-260ENST00000639483 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
KCNMA1-260ENST00000639483 ABCC8Q09428 1581 aa24.43■■□□□ 1.5
KCNMA1-260ENST00000639483 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
KCNMA1-260ENST00000639483 SOGA1O94964 1423 aa24.33■■□□□ 1.48
KCNMA1-260ENST00000639483 SMARCA4P51532 1647 aa24.31■■□□□ 1.48
KCNMA1-260ENST00000639483 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
KCNMA1-260ENST00000639483 P3H3Q8IVL6 736 aa24.26■■□□□ 1.47
KCNMA1-260ENST00000639483 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
KCNMA1-260ENST00000639483 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
KCNMA1-260ENST00000639483 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
KCNMA1-260ENST00000639483 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
KCNMA1-260ENST00000639483 CLIP1P30622 1438 aa24.01■■□□□ 1.43
KCNMA1-260ENST00000639483 FAM50AQ14320 339 aaKnown RBP24■■□□□ 1.43
KCNMA1-260ENST00000639483 GOLGA3Q08378 1498 aa24■■□□□ 1.43
KCNMA1-260ENST00000639483 EEA1Q15075 1411 aa24■■□□□ 1.43
KCNMA1-260ENST00000639483 YTHDC1Q96MU7 727 aaKnown RBP23.99■■□□□ 1.43
KCNMA1-260ENST00000639483 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
KCNMA1-260ENST00000639483 ARID3CA6NKF2 412 aa23.94■■□□□ 1.42
KCNMA1-260ENST00000639483 BICRAQ9NZM4 1560 aa23.89■■□□□ 1.41
KCNMA1-260ENST00000639483 FBLN2P98095 1184 aa23.88■■□□□ 1.41
KCNMA1-260ENST00000639483 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
KCNMA1-260ENST00000639483 DIEXFQ68CQ4 756 aaKnown RBP23.8■■□□□ 1.4
KCNMA1-260ENST00000639483 UNC13AQ9UPW8 1703 aa23.79■■□□□ 1.4
KCNMA1-260ENST00000639483 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
KCNMA1-260ENST00000639483 CENPBP07199 599 aaPredicted RBP23.72■■□□□ 1.39
KCNMA1-260ENST00000639483 CUX2O14529 1486 aa23.69■■□□□ 1.38
KCNMA1-260ENST00000639483 NEUROD1Q13562 356 aa23.69■■□□□ 1.38
KCNMA1-260ENST00000639483 EIF4G1Q04637 1599 aaKnown RBP23.67■■□□□ 1.38
KCNMA1-260ENST00000639483 RAPGEF2Q9Y4G8 1499 aa23.65■■□□□ 1.38
KCNMA1-260ENST00000639483 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
KCNMA1-260ENST00000639483 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
KCNMA1-260ENST00000639483 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
KCNMA1-260ENST00000639483 SYNJ1O43426 1573 aa23.53■■□□□ 1.36
KCNMA1-260ENST00000639483 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
KCNMA1-260ENST00000639483 ZNF316A6NFI3 1004 aaPredicted RBP23.52■■□□□ 1.36
KCNMA1-260ENST00000639483 TRIM52Q96A61 297 aa23.49■■□□□ 1.35
KCNMA1-260ENST00000639483 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
KCNMA1-260ENST00000639483 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
KCNMA1-260ENST00000639483 DNAJC5BQ9UF47 199 aa23.37■■□□□ 1.33
KCNMA1-260ENST00000639483 CHIC2Q9UKJ5 165 aa23.37■■□□□ 1.33
KCNMA1-260ENST00000639483 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
KCNMA1-260ENST00000639483 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
KCNMA1-260ENST00000639483 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
KCNMA1-260ENST00000639483 ZNF777Q9ULD5 760 aaPredicted RBP23.34■■□□□ 1.33
KCNMA1-260ENST00000639483 CHMP7Q8WUX9 453 aaPredicted RBP23.31■■□□□ 1.32
KCNMA1-260ENST00000639483 POLR3GLQ9BT43 218 aa23.31■■□□□ 1.32
KCNMA1-260ENST00000639483 CFTRP13569 1480 aa23.29■■□□□ 1.32
KCNMA1-260ENST00000639483 NESP48681 1621 aa23.28■■□□□ 1.32
KCNMA1-260ENST00000639483 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
KCNMA1-260ENST00000639483 MYT1LQ9UL68 1186 aa23.26■■□□□ 1.31
KCNMA1-260ENST00000639483 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
KCNMA1-260ENST00000639483 PEG3Q9GZU2 1588 aa23.25■■□□□ 1.31
KCNMA1-260ENST00000639483 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
KCNMA1-260ENST00000639483 IGF1RP08069 1367 aa23.24■■□□□ 1.31
KCNMA1-260ENST00000639483 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
KCNMA1-260ENST00000639483 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
KCNMA1-260ENST00000639483 CUX1P39880 1505 aa23.22■■□□□ 1.31
KCNMA1-260ENST00000639483 ERCC6Q03468 1493 aa23.18■■□□□ 1.3
KCNMA1-260ENST00000639483 CCNB3Q8WWL7 1395 aa23.17■■□□□ 1.3
KCNMA1-260ENST00000639483 RRP7BPQ9NSQ0 103 aa23.17■■□□□ 1.3
KCNMA1-260ENST00000639483 FHOD3Q2V2M9 1422 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms