RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-222ENST00000639482 ERICH3Q5RHP9 1530 aa14.64□□□□□ -0.07
SPIN3-222ENST00000639482 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
SPIN3-222ENST00000639482 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
SPIN3-222ENST00000639482 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
SPIN3-222ENST00000639482 KIF21AQ7Z4S6 1674 aa14.59□□□□□ -0.07
SPIN3-222ENST00000639482 LAMC3Q9Y6N6 1575 aa14.57□□□□□ -0.08
SPIN3-222ENST00000639482 SUPT16HQ9Y5B9 1047 aaKnown RBP14.57□□□□□ -0.08
SPIN3-222ENST00000639482 ARID3CA6NKF2 412 aa14.56□□□□□ -0.08
SPIN3-222ENST00000639482 KCNH8Q96L42 1107 aa14.55□□□□□ -0.08
SPIN3-222ENST00000639482 FHOD3Q2V2M9 1422 aa14.54□□□□□ -0.08
SPIN3-222ENST00000639482 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
SPIN3-222ENST00000639482 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.08
SPIN3-222ENST00000639482 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
SPIN3-222ENST00000639482 HIRIP3Q9BW71 556 aaPredicted RBP14.48□□□□□ -0.09
SPIN3-222ENST00000639482 FBLN2P98095 1184 aa14.45□□□□□ -0.1
SPIN3-222ENST00000639482 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
SPIN3-222ENST00000639482 ZNF608Q9ULD9 1512 aaPredicted RBP14.44□□□□□ -0.1
SPIN3-222ENST00000639482 TSHZ2Q9NRE2 1034 aa14.43□□□□□ -0.1
SPIN3-222ENST00000639482 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
SPIN3-222ENST00000639482 DDX10Q13206 875 aaKnown RBP14.42□□□□□ -0.1
SPIN3-222ENST00000639482 DHX57Q6P158 1386 aaKnown RBP14.42□□□□□ -0.1
SPIN3-222ENST00000639482 FKBP8Q14318 412 aa14.41□□□□□ -0.1
SPIN3-222ENST00000639482 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
SPIN3-222ENST00000639482 TRIM52Q96A61 297 aa14.37□□□□□ -0.11
SPIN3-222ENST00000639482 PHLDB1Q86UU1 1377 aa14.37□□□□□ -0.11
SPIN3-222ENST00000639482 PCF11O94913 1555 aaKnown RBP14.37□□□□□ -0.11
SPIN3-222ENST00000639482 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
SPIN3-222ENST00000639482 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
SPIN3-222ENST00000639482 ABCA5Q8WWZ7 1642 aa14.36□□□□□ -0.11
SPIN3-222ENST00000639482 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
SPIN3-222ENST00000639482 SIN3AQ96ST3 1273 aa14.34□□□□□ -0.11
SPIN3-222ENST00000639482 TIAM1Q13009 1591 aa14.32□□□□□ -0.12
SPIN3-222ENST00000639482 CUL7Q14999 1698 aa14.32□□□□□ -0.12
SPIN3-222ENST00000639482 LRRC9Q6ZRR7 1453 aa14.32□□□□□ -0.12
SPIN3-222ENST00000639482 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
SPIN3-222ENST00000639482 NEFLP07196 543 aa14.3□□□□□ -0.12
SPIN3-222ENST00000639482 ANP32EQ9BTT0 268 aa14.29□□□□□ -0.12
SPIN3-222ENST00000639482 CTTNBP2Q8WZ74 1663 aa14.28□□□□□ -0.12
SPIN3-222ENST00000639482 RRBP1Q9P2E9 1410 aaKnown RBP14.28□□□□□ -0.12
SPIN3-222ENST00000639482 CHMP7Q8WUX9 453 aaPredicted RBP14.27□□□□□ -0.13
SPIN3-222ENST00000639482 MTUS2Q5JR59 1369 aa14.26□□□□□ -0.13
SPIN3-222ENST00000639482 IRX6P78412 446 aaPredicted RBP14.25□□□□□ -0.13
SPIN3-222ENST00000639482 SNAPC4Q5SXM2 1469 aa14.25□□□□□ -0.13
SPIN3-222ENST00000639482 PBRM1Q86U86 1689 aa14.24□□□□□ -0.13
SPIN3-222ENST00000639482 GRIN2BQ13224 1484 aa14.24□□□□□ -0.13
SPIN3-222ENST00000639482 CLSPNQ9HAW4 1339 aa14.24□□□□□ -0.13
SPIN3-222ENST00000639482 CASKIN1Q8WXD9 1431 aa14.23□□□□□ -0.13
SPIN3-222ENST00000639482 RAB3GAP2Q9H2M9 1393 aa14.23□□□□□ -0.13
SPIN3-222ENST00000639482 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
SPIN3-222ENST00000639482 FMN1Q68DA7 1419 aa14.22□□□□□ -0.13
SPIN3-222ENST00000639482 IFT140Q96RY7 1462 aa14.21□□□□□ -0.13
SPIN3-222ENST00000639482 WDR62O43379 1518 aa14.21□□□□□ -0.13
SPIN3-222ENST00000639482 EFCAB5A4FU69 1503 aa14.2□□□□□ -0.14
SPIN3-222ENST00000639482 FYCO1Q9BQS8 1478 aa14.2□□□□□ -0.14
SPIN3-222ENST00000639482 ADAMTS12P58397 1594 aa14.19□□□□□ -0.14
SPIN3-222ENST00000639482 EIF4G3O43432 1585 aaKnown RBP14.18□□□□□ -0.14
SPIN3-222ENST00000639482 CNGB1Q14028 1251 aaPredicted RBP14.17□□□□□ -0.14
SPIN3-222ENST00000639482 CDK13Q14004 1512 aaKnown RBP14.17□□□□□ -0.14
SPIN3-222ENST00000639482 LRRIQ1Q96JM4 1722 aa14.17□□□□□ -0.14
SPIN3-222ENST00000639482 ANP32CO43423 234 aa14.16□□□□□ -0.14
SPIN3-222ENST00000639482 IQGAP2Q13576 1575 aa14.16□□□□□ -0.14
SPIN3-222ENST00000639482 RRP7BPQ9NSQ0 103 aa14.15□□□□□ -0.14
SPIN3-222ENST00000639482 RBM19Q9Y4C8 960 aaKnown RBP14.15□□□□□ -0.14
SPIN3-222ENST00000639482 SAMD9Q5K651 1589 aa14.15□□□□□ -0.14
SPIN3-222ENST00000639482 BCL11AQ9H165 835 aa14.15□□□□□ -0.14
SPIN3-222ENST00000639482 CFAP43Q8NDM7 1665 aa14.14□□□□□ -0.15
SPIN3-222ENST00000639482 MAGI3Q5TCQ9 1506 aa14.14□□□□□ -0.15
SPIN3-222ENST00000639482 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
SPIN3-222ENST00000639482 MAP3K1Q13233 1512 aa14.12□□□□□ -0.15
SPIN3-222ENST00000639482 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
SPIN3-222ENST00000639482 PTPRKQ15262 1439 aa14.12□□□□□ -0.15
SPIN3-222ENST00000639482 NCOA2Q15596 1464 aa14.11□□□□□ -0.15
SPIN3-222ENST00000639482 SETD5Q9C0A6 1442 aa14.11□□□□□ -0.15
SPIN3-222ENST00000639482 FGD6Q6ZV73 1430 aa14.11□□□□□ -0.15
SPIN3-222ENST00000639482 ZNF644Q9H582 1327 aaPredicted RBP14.1□□□□□ -0.15
SPIN3-222ENST00000639482 JPH4Q96JJ6 628 aa14.1□□□□□ -0.15
SPIN3-222ENST00000639482 HNRNPUQ00839 825 aaKnown RBP eCLIP14.1□□□□□ -0.15
SPIN3-222ENST00000639482 ERICH6Q7L0X2 663 aa14.09□□□□□ -0.15
SPIN3-222ENST00000639482 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
SPIN3-222ENST00000639482 DISP1Q96F81 1524 aa14.07□□□□□ -0.16
SPIN3-222ENST00000639482 EPRSP07814 1512 aaKnown RBP14.06□□□□□ -0.16
SPIN3-222ENST00000639482 KIAA0586Q9BVV6 1533 aa14.06□□□□□ -0.16
SPIN3-222ENST00000639482 PLB1Q6P1J6 1458 aa14.06□□□□□ -0.16
SPIN3-222ENST00000639482 SENP3-EIF4A1A0A087X0R7 540 aa14.05□□□□□ -0.16
SPIN3-222ENST00000639482 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
SPIN3-222ENST00000639482 FOXD1Q16676 465 aa14.03□□□□□ -0.16
SPIN3-222ENST00000639482 MYOM3Q5VTT5 1437 aa14.03□□□□□ -0.16
SPIN3-222ENST00000639482 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
SPIN3-222ENST00000639482 MAPKBP1O60336 1514 aa14.03□□□□□ -0.16
SPIN3-222ENST00000639482 SYNJ2O15056 1496 aa14.02□□□□□ -0.16
SPIN3-222ENST00000639482 PRG4Q92954 1404 aaPredicted RBP14.01□□□□□ -0.17
SPIN3-222ENST00000639482 TONSLQ96HA7 1378 aa14.01□□□□□ -0.17
SPIN3-222ENST00000639482 KIAA0556O60303 1618 aa14□□□□□ -0.17
SPIN3-222ENST00000639482 UGGT2Q9NYU1 1516 aa14□□□□□ -0.17
SPIN3-222ENST00000639482 NUP153P49790 1475 aaKnown RBP13.99□□□□□ -0.17
SPIN3-222ENST00000639482 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
SPIN3-222ENST00000639482 HECW1Q76N89 1606 aa13.98□□□□□ -0.17
SPIN3-222ENST00000639482 SUPT6HQ7KZ85 1726 aaKnown RBP13.97□□□□□ -0.17
SPIN3-222ENST00000639482 MSH5O43196 834 aa13.97□□□□□ -0.17
SPIN3-222ENST00000639482 CDK11AQ9UQ88 783 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms