RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-222ENST00000639482 NISCHQ9Y2I1 1504 aa20.66■□□□□ 0.9
SPIN3-222ENST00000639482 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
SPIN3-222ENST00000639482 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
SPIN3-222ENST00000639482 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.4
SPIN3-222ENST00000639482 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
SPIN3-222ENST00000639482 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
SPIN3-222ENST00000639482 ABCC9O60706 1549 aa16.98■□□□□ 0.31
SPIN3-222ENST00000639482 PCGF6Q9BYE7 350 aa16.75■□□□□ 0.27
SPIN3-222ENST00000639482 DCAF1Q9Y4B6 1507 aa16.73■□□□□ 0.27
SPIN3-222ENST00000639482 SCRIBQ14160 1630 aa16.71■□□□□ 0.27
SPIN3-222ENST00000639482 HRCP23327 699 aa16.66■□□□□ 0.26
SPIN3-222ENST00000639482 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
SPIN3-222ENST00000639482 CHIC1Q5VXU3 224 aa16.58■□□□□ 0.24
SPIN3-222ENST00000639482 MYO15BQ96JP2 1530 aa16.52■□□□□ 0.24
SPIN3-222ENST00000639482 LOC105371045A0A1W2PR82 267 aa16.41■□□□□ 0.22
SPIN3-222ENST00000639482 NACADO15069 1562 aa16.36■□□□□ 0.21
SPIN3-222ENST00000639482 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
SPIN3-222ENST00000639482 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
SPIN3-222ENST00000639482 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
SPIN3-222ENST00000639482 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.19
SPIN3-222ENST00000639482 RB1CC1Q8TDY2 1594 aa16.23■□□□□ 0.19
SPIN3-222ENST00000639482 MROH2BQ7Z745 1585 aa16.15■□□□□ 0.18
SPIN3-222ENST00000639482 FAM9AQ8IZU1 332 aaPredicted RBP16.11■□□□□ 0.17
SPIN3-222ENST00000639482 WIZO95785 1651 aa16.05■□□□□ 0.16
SPIN3-222ENST00000639482 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.15
SPIN3-222ENST00000639482 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-222ENST00000639482 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
SPIN3-222ENST00000639482 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
SPIN3-222ENST00000639482 BAZ1AQ9NRL2 1556 aaPredicted RBP15.85■□□□□ 0.13
SPIN3-222ENST00000639482 SMARCA4P51532 1647 aa15.79■□□□□ 0.12
SPIN3-222ENST00000639482 TTBK1Q5TCY1 1321 aaPredicted RBP15.77■□□□□ 0.11
SPIN3-222ENST00000639482 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
SPIN3-222ENST00000639482 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
SPIN3-222ENST00000639482 ZEB1P37275 1124 aaPredicted RBP15.69■□□□□ 0.1
SPIN3-222ENST00000639482 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
SPIN3-222ENST00000639482 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
SPIN3-222ENST00000639482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
SPIN3-222ENST00000639482 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
SPIN3-222ENST00000639482 CCER1Q8TC90 406 aaPredicted RBP15.57■□□□□ 0.08
SPIN3-222ENST00000639482 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
SPIN3-222ENST00000639482 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
SPIN3-222ENST00000639482 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
SPIN3-222ENST00000639482 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
SPIN3-222ENST00000639482 SOGA1O94964 1423 aa15.44■□□□□ 0.06
SPIN3-222ENST00000639482 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
SPIN3-222ENST00000639482 RUSC2Q8N2Y8 1516 aa15.42■□□□□ 0.06
SPIN3-222ENST00000639482 RANGAP1P46060 587 aaPredicted RBP15.38■□□□□ 0.05
SPIN3-222ENST00000639482 YTHDC1Q96MU7 727 aaKnown RBP15.38■□□□□ 0.05
SPIN3-222ENST00000639482 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
SPIN3-222ENST00000639482 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
SPIN3-222ENST00000639482 ACIN1Q9UKV3 1341 aaKnown RBP15.36■□□□□ 0.05
SPIN3-222ENST00000639482 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
SPIN3-222ENST00000639482 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
SPIN3-222ENST00000639482 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
SPIN3-222ENST00000639482 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
SPIN3-222ENST00000639482 CENPBP07199 599 aaPredicted RBP15.27■□□□□ 0.03
SPIN3-222ENST00000639482 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
SPIN3-222ENST00000639482 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
SPIN3-222ENST00000639482 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
SPIN3-222ENST00000639482 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
SPIN3-222ENST00000639482 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
SPIN3-222ENST00000639482 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
SPIN3-222ENST00000639482 HMGXB3Q12766 1538 aa15.1■□□□□ 0.01
SPIN3-222ENST00000639482 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
SPIN3-222ENST00000639482 CUX1P39880 1505 aa15.03■□□□□ -0
SPIN3-222ENST00000639482 TNIKQ9UKE5 1360 aa15.03■□□□□ -0
SPIN3-222ENST00000639482 CFTRP13569 1480 aa15.02■□□□□ -0
SPIN3-222ENST00000639482 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
SPIN3-222ENST00000639482 NESP48681 1621 aa15.02■□□□□ -0
SPIN3-222ENST00000639482 GOLGA3Q08378 1498 aa15.01□□□□□ -0.01
SPIN3-222ENST00000639482 MIER1Q8N108 512 aa15□□□□□ -0.01
SPIN3-222ENST00000639482 EEA1Q15075 1411 aa14.99□□□□□ -0.01
SPIN3-222ENST00000639482 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
SPIN3-222ENST00000639482 TOP2BQ02880 1626 aa14.99□□□□□ -0.01
SPIN3-222ENST00000639482 CEP164Q9UPV0 1460 aa14.94□□□□□ -0.02
SPIN3-222ENST00000639482 CLIP1P30622 1438 aa14.91□□□□□ -0.02
SPIN3-222ENST00000639482 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
SPIN3-222ENST00000639482 APLP2Q06481 763 aa14.87□□□□□ -0.03
SPIN3-222ENST00000639482 CUX2O14529 1486 aa14.87□□□□□ -0.03
SPIN3-222ENST00000639482 FANCD2Q9BXW9 1451 aa14.87□□□□□ -0.03
SPIN3-222ENST00000639482 KIF27Q86VH2 1401 aa14.85□□□□□ -0.03
SPIN3-222ENST00000639482 FGD5Q6ZNL6 1462 aa14.84□□□□□ -0.03
SPIN3-222ENST00000639482 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
SPIN3-222ENST00000639482 P3H3Q8IVL6 736 aa14.84□□□□□ -0.03
SPIN3-222ENST00000639482 KIF21BO75037 1637 aa14.83□□□□□ -0.04
SPIN3-222ENST00000639482 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
SPIN3-222ENST00000639482 IGF1RP08069 1367 aa14.78□□□□□ -0.04
SPIN3-222ENST00000639482 ATP1B4Q9UN42 357 aaPredicted RBP14.76□□□□□ -0.05
SPIN3-222ENST00000639482 KANK4Q5T7N3 995 aaPredicted RBP14.75□□□□□ -0.05
SPIN3-222ENST00000639482 ITGAEP38570 1179 aa14.75□□□□□ -0.05
SPIN3-222ENST00000639482 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
SPIN3-222ENST00000639482 VPS8Q8N3P4 1428 aa14.73□□□□□ -0.05
SPIN3-222ENST00000639482 MYT1Q01538 1121 aa14.72□□□□□ -0.05
SPIN3-222ENST00000639482 CARMIL1Q5VZK9 1371 aa14.72□□□□□ -0.05
SPIN3-222ENST00000639482 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
SPIN3-222ENST00000639482 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
SPIN3-222ENST00000639482 POLA1P09884 1462 aaPredicted RBP14.7□□□□□ -0.06
SPIN3-222ENST00000639482 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
SPIN3-222ENST00000639482 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
SPIN3-222ENST00000639482 BCANQ96GW7 911 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms