RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 IGF1RP08069 1367 aa29.5■■■□□ 2.31
SMN2-216ENST00000638794 CUL7Q14999 1698 aa29.49■■■□□ 2.31
SMN2-216ENST00000638794 KIAA0586Q9BVV6 1533 aa29.39■■■□□ 2.3
SMN2-216ENST00000638794 KIF13AQ9H1H9 1805 aa29.32■■■□□ 2.28
SMN2-216ENST00000638794 CARMIL1Q5VZK9 1371 aa29.3■■■□□ 2.28
SMN2-216ENST00000638794 ADCY10Q96PN6 1610 aa29.26■■■□□ 2.27
SMN2-216ENST00000638794 MAPKBP1O60336 1514 aa29.2■■■□□ 2.26
SMN2-216ENST00000638794 NPM1P06748 294 aaKnown RBP eCLIP29.17■■■□□ 2.26
SMN2-216ENST00000638794 ABCC10Q5T3U5 1492 aa29.15■■■□□ 2.26
SMN2-216ENST00000638794 IQGAP2Q13576 1575 aa29.14■■■□□ 2.26
SMN2-216ENST00000638794 DIP2BQ9P265 1576 aa29.11■■■□□ 2.25
SMN2-216ENST00000638794 FAM69CQ0P6D2 419 aa29.09■■■□□ 2.25
SMN2-216ENST00000638794 PTPRGP23470 1445 aa29.09■■■□□ 2.25
SMN2-216ENST00000638794 CARMIL2Q6F5E8 1435 aa29.08■■■□□ 2.25
SMN2-216ENST00000638794 RAPGEF2Q9Y4G8 1499 aa29.05■■■□□ 2.24
SMN2-216ENST00000638794 TNIKQ9UKE5 1360 aa29.05■■■□□ 2.24
SMN2-216ENST00000638794 TTBK1Q5TCY1 1321 aaPredicted RBP29.04■■■□□ 2.24
SMN2-216ENST00000638794 DISP1Q96F81 1524 aa28.99■■■□□ 2.23
SMN2-216ENST00000638794 AEBP2Q6ZN18 517 aaPredicted RBP28.98■■■□□ 2.23
SMN2-216ENST00000638794 ABCC2Q92887 1545 aa28.96■■■□□ 2.23
SMN2-216ENST00000638794 UGGT2Q9NYU1 1516 aa28.95■■■□□ 2.23
SMN2-216ENST00000638794 TSPOAP1O95153 1857 aa28.93■■■□□ 2.22
SMN2-216ENST00000638794 UHRF1BP1LA0JNW5 1464 aa28.91■■■□□ 2.22
SMN2-216ENST00000638794 KIAA0556O60303 1618 aa28.89■■■□□ 2.22
SMN2-216ENST00000638794 UACAQ9BZF9 1416 aa28.88■■■□□ 2.21
SMN2-216ENST00000638794 CTTNBP2Q8WZ74 1663 aa28.87■■■□□ 2.21
SMN2-216ENST00000638794 ASXL2Q76L83 1435 aa28.85■■■□□ 2.21
SMN2-216ENST00000638794 KDM6BO15054 1643 aa28.83■■■□□ 2.21
SMN2-216ENST00000638794 PLB1Q6P1J6 1458 aa28.82■■■□□ 2.2
SMN2-216ENST00000638794 KDM5BQ9UGL1 1544 aa28.79■■■□□ 2.2
SMN2-216ENST00000638794 GLI2P10070 1586 aa28.78■■■□□ 2.2
SMN2-216ENST00000638794 PRXQ9BXM0 1461 aa28.78■■■□□ 2.2
SMN2-216ENST00000638794 ZCCHC11Q5TAX3 1644 aaKnown RBP28.76■■■□□ 2.19
SMN2-216ENST00000638794 PPRC1Q5VV67 1664 aaKnown RBP28.74■■■□□ 2.19
SMN2-216ENST00000638794 GOLGA3Q08378 1498 aa28.7■■■□□ 2.18
SMN2-216ENST00000638794 EPRSP07814 1512 aaKnown RBP28.68■■■□□ 2.18
SMN2-216ENST00000638794 MAP3K4Q9Y6R4 1608 aa28.65■■■□□ 2.18
SMN2-216ENST00000638794 ABCA8O94911 1581 aa28.61■■■□□ 2.17
SMN2-216ENST00000638794 WDR7Q9Y4E6 1490 aa28.59■■■□□ 2.17
SMN2-216ENST00000638794 CSRNP3Q8WYN3 585 aa28.52■■■□□ 2.16
SMN2-216ENST00000638794 TEX14Q8IWB6 1497 aa28.52■■■□□ 2.16
SMN2-216ENST00000638794 COL17A1Q9UMD9 1497 aaPredicted RBP28.5■■■□□ 2.15
SMN2-216ENST00000638794 KDM4FA0A1W2PPD8 638 aa28.48■■■□□ 2.15
SMN2-216ENST00000638794 SAMD9Q5K651 1589 aa28.45■■■□□ 2.14
SMN2-216ENST00000638794 P3H3Q8IVL6 736 aa28.44■■■□□ 2.14
SMN2-216ENST00000638794 CFAP43Q8NDM7 1665 aa28.44■■■□□ 2.14
SMN2-216ENST00000638794 EEA1Q15075 1411 aa28.43■■■□□ 2.14
SMN2-216ENST00000638794 KCNH8Q96L42 1107 aa28.41■■■□□ 2.14
SMN2-216ENST00000638794 CD109Q6YHK3 1445 aa28.39■■■□□ 2.14
SMN2-216ENST00000638794 MAGI3Q5TCQ9 1506 aa28.37■■■□□ 2.13
SMN2-216ENST00000638794 ARID3CA6NKF2 412 aa28.36■■■□□ 2.13
SMN2-216ENST00000638794 FAM9AQ8IZU1 332 aaPredicted RBP28.36■■■□□ 2.13
SMN2-216ENST00000638794 ATP10BO94823 1461 aa28.35■■■□□ 2.13
SMN2-216ENST00000638794 RAPGEF6Q8TEU7 1601 aa28.32■■■□□ 2.12
SMN2-216ENST00000638794 ADGRL1O94910 1474 aa28.3■■■□□ 2.12
SMN2-216ENST00000638794 RANGAP1P46060 587 aaPredicted RBP28.26■■■□□ 2.11
SMN2-216ENST00000638794 KIF21BO75037 1637 aa28.25■■■□□ 2.11
SMN2-216ENST00000638794 FHOD3Q2V2M9 1422 aa28.23■■■□□ 2.11
SMN2-216ENST00000638794 ABCA9Q8IUA7 1624 aa28.22■■■□□ 2.11
SMN2-216ENST00000638794 NUP153P49790 1475 aaKnown RBP28.21■■■□□ 2.11
SMN2-216ENST00000638794 EFCAB5A4FU69 1503 aa28.15■■■□□ 2.1
SMN2-216ENST00000638794 ARAP3Q8WWN8 1544 aa28.15■■■□□ 2.1
SMN2-216ENST00000638794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.15■■■□□ 2.1
SMN2-216ENST00000638794 HNRNPUL2Q1KMD3 747 aaKnown RBP28.15■■■□□ 2.1
SMN2-216ENST00000638794 PHLDB1Q86UU1 1377 aa28.06■■■□□ 2.08
SMN2-216ENST00000638794 CHIC1Q5VXU3 224 aa28.05■■■□□ 2.08
SMN2-216ENST00000638794 NEO1Q92859 1461 aa28.04■■■□□ 2.08
SMN2-216ENST00000638794 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
SMN2-216ENST00000638794 PLEKHD1A6NEE1 506 aa27.99■■■□□ 2.07
SMN2-216ENST00000638794 RAPGEF3O95398 923 aa27.98■■■□□ 2.07
SMN2-216ENST00000638794 UBTFP17480 764 aaKnown RBP27.98■■■□□ 2.07
SMN2-216ENST00000638794 FRMPD1Q5SYB0 1578 aa27.97■■■□□ 2.07
SMN2-216ENST00000638794 CDK13Q14004 1512 aaKnown RBP27.95■■■□□ 2.06
SMN2-216ENST00000638794 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.95■■■□□ 2.06
SMN2-216ENST00000638794 TTC37Q6PGP7 1564 aa27.93■■■□□ 2.06
SMN2-216ENST00000638794 HECW2Q9P2P5 1572 aa27.91■■■□□ 2.06
SMN2-216ENST00000638794 ARHGAP35Q9NRY4 1499 aa27.91■■■□□ 2.06
SMN2-216ENST00000638794 CFAP74Q9C0B2 1584 aa27.89■■■□□ 2.05
SMN2-216ENST00000638794 FMN1Q68DA7 1419 aa27.88■■■□□ 2.05
SMN2-216ENST00000638794 HECW1Q76N89 1606 aa27.87■■■□□ 2.05
SMN2-216ENST00000638794 FANCAO15360 1455 aa27.87■■■□□ 2.05
SMN2-216ENST00000638794 RICTORQ6R327 1708 aa27.87■■■□□ 2.05
SMN2-216ENST00000638794 AKNAQ7Z591 1439 aa27.86■■■□□ 2.05
SMN2-216ENST00000638794 DENND4BO75064 1496 aaPredicted RBP27.84■■■□□ 2.05
SMN2-216ENST00000638794 ADAMTSL3P82987 1691 aa27.83■■■□□ 2.05
SMN2-216ENST00000638794 ARHGEF40Q8TER5 1519 aa27.82■■■□□ 2.04
SMN2-216ENST00000638794 ATP1B4Q9UN42 357 aaPredicted RBP27.8■■■□□ 2.04
SMN2-216ENST00000638794 BCORL1Q5H9F3 1711 aa27.78■■■□□ 2.04
SMN2-216ENST00000638794 ZMYM4Q5VZL5 1548 aa27.75■■■□□ 2.03
SMN2-216ENST00000638794 LRRIQ1Q96JM4 1722 aa27.74■■■□□ 2.03
SMN2-216ENST00000638794 PTPRMP28827 1452 aa27.74■■■□□ 2.03
SMN2-216ENST00000638794 PLCH2O75038 1416 aa27.74■■■□□ 2.03
SMN2-216ENST00000638794 ARID4BQ4LE39 1312 aaPredicted RBP27.73■■■□□ 2.03
SMN2-216ENST00000638794 MYO5CQ9NQX4 1742 aa27.72■■■□□ 2.03
SMN2-216ENST00000638794 KIF14Q15058 1648 aa27.72■■■□□ 2.03
SMN2-216ENST00000638794 MADDQ8WXG6 1647 aa27.72■■■□□ 2.03
SMN2-216ENST00000638794 CDK11AQ9UQ88 783 aaPredicted RBP27.7■■■□□ 2.02
SMN2-216ENST00000638794 ZFYVE16Q7Z3T8 1539 aa27.68■■■□□ 2.02
SMN2-216ENST00000638794 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
SMN2-216ENST00000638794 POGZQ7Z3K3 1410 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms