RNA–Protein interactions for RNA: ENST00000638696.1

PAX6-237, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-237ENST00000638696 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
PAX6-237ENST00000638696 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
PAX6-237ENST00000638696 ERCC6L2Q5T890 1561 aa22.34■■□□□ 1.17
PAX6-237ENST00000638696 KIAA0586Q9BVV6 1533 aa22.31■■□□□ 1.16
PAX6-237ENST00000638696 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
PAX6-237ENST00000638696 RAPGEF2Q9Y4G8 1499 aa22.26■■□□□ 1.15
PAX6-237ENST00000638696 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
PAX6-237ENST00000638696 TTBK1Q5TCY1 1321 aaPredicted RBP22.16■■□□□ 1.14
PAX6-237ENST00000638696 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
PAX6-237ENST00000638696 CARMIL2Q6F5E8 1435 aa22.14■■□□□ 1.13
PAX6-237ENST00000638696 NPM1P06748 294 aaKnown RBP eCLIP22.13■■□□□ 1.13
PAX6-237ENST00000638696 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
PAX6-237ENST00000638696 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
PAX6-237ENST00000638696 PRXQ9BXM0 1461 aa22.1■■□□□ 1.13
PAX6-237ENST00000638696 PTPRGP23470 1445 aa22.1■■□□□ 1.13
PAX6-237ENST00000638696 TNIKQ9UKE5 1360 aa22.07■■□□□ 1.12
PAX6-237ENST00000638696 EEA1Q15075 1411 aa22.06■■□□□ 1.12
PAX6-237ENST00000638696 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
PAX6-237ENST00000638696 DISP1Q96F81 1524 aa21.99■■□□□ 1.11
PAX6-237ENST00000638696 ADCY10Q96PN6 1610 aa21.94■■□□□ 1.1
PAX6-237ENST00000638696 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
PAX6-237ENST00000638696 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
PAX6-237ENST00000638696 GOLGA3Q08378 1498 aa21.91■■□□□ 1.1
PAX6-237ENST00000638696 UACAQ9BZF9 1416 aa21.9■■□□□ 1.1
PAX6-237ENST00000638696 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
PAX6-237ENST00000638696 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
PAX6-237ENST00000638696 RANGAP1P46060 587 aaPredicted RBP21.89■■□□□ 1.09
PAX6-237ENST00000638696 EHMT2Q96KQ7 1210 aa21.89■■□□□ 1.09
PAX6-237ENST00000638696 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
PAX6-237ENST00000638696 KIF13AQ9H1H9 1805 aa21.88■■□□□ 1.09
PAX6-237ENST00000638696 ABCC2Q92887 1545 aa21.84■■□□□ 1.09
PAX6-237ENST00000638696 UHRF1BP1LA0JNW5 1464 aa21.83■■□□□ 1.09
PAX6-237ENST00000638696 UBTFP17480 764 aaKnown RBP21.83■■□□□ 1.09
PAX6-237ENST00000638696 MAPKBP1O60336 1514 aa21.83■■□□□ 1.09
PAX6-237ENST00000638696 ABCC10Q5T3U5 1492 aa21.81■■□□□ 1.08
PAX6-237ENST00000638696 KDM4FA0A1W2PPD8 638 aa21.79■■□□□ 1.08
PAX6-237ENST00000638696 KIF21BO75037 1637 aa21.77■■□□□ 1.08
PAX6-237ENST00000638696 PLB1Q6P1J6 1458 aa21.77■■□□□ 1.07
PAX6-237ENST00000638696 ASXL2Q76L83 1435 aa21.75■■□□□ 1.07
PAX6-237ENST00000638696 KDM5BQ9UGL1 1544 aa21.73■■□□□ 1.07
PAX6-237ENST00000638696 DIP2BQ9P265 1576 aa21.7■■□□□ 1.06
PAX6-237ENST00000638696 ARID3CA6NKF2 412 aa21.69■■□□□ 1.06
PAX6-237ENST00000638696 ABCA8O94911 1581 aa21.67■■□□□ 1.06
PAX6-237ENST00000638696 SAMD9Q5K651 1589 aa21.66■■□□□ 1.06
PAX6-237ENST00000638696 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
PAX6-237ENST00000638696 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
PAX6-237ENST00000638696 FHOD3Q2V2M9 1422 aa21.63■■□□□ 1.05
PAX6-237ENST00000638696 KDM6BO15054 1643 aa21.63■■□□□ 1.05
PAX6-237ENST00000638696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.63■■□□□ 1.05
PAX6-237ENST00000638696 HNRNPUL2Q1KMD3 747 aaKnown RBP21.63■■□□□ 1.05
PAX6-237ENST00000638696 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
PAX6-237ENST00000638696 WDR7Q9Y4E6 1490 aa21.58■■□□□ 1.05
PAX6-237ENST00000638696 TSPOAP1O95153 1857 aa21.58■■□□□ 1.04
PAX6-237ENST00000638696 ATP10BO94823 1461 aa21.58■■□□□ 1.04
PAX6-237ENST00000638696 EFCAB5A4FU69 1503 aa21.57■■□□□ 1.04
PAX6-237ENST00000638696 GLI2P10070 1586 aa21.57■■□□□ 1.04
PAX6-237ENST00000638696 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
PAX6-237ENST00000638696 RAPGEF6Q8TEU7 1601 aa21.53■■□□□ 1.04
PAX6-237ENST00000638696 NUP153P49790 1475 aaKnown RBP21.48■■□□□ 1.03
PAX6-237ENST00000638696 PLEKHD1A6NEE1 506 aa21.48■■□□□ 1.03
PAX6-237ENST00000638696 CD109Q6YHK3 1445 aa21.47■■□□□ 1.03
PAX6-237ENST00000638696 ARHGAP35Q9NRY4 1499 aa21.47■■□□□ 1.03
PAX6-237ENST00000638696 FMN1Q68DA7 1419 aa21.45■■□□□ 1.02
PAX6-237ENST00000638696 TEX14Q8IWB6 1497 aa21.44■■□□□ 1.02
PAX6-237ENST00000638696 MAP3K4Q9Y6R4 1608 aa21.44■■□□□ 1.02
PAX6-237ENST00000638696 ADGRL1O94910 1474 aa21.42■■□□□ 1.02
PAX6-237ENST00000638696 PPRC1Q5VV67 1664 aaKnown RBP21.4■■□□□ 1.02
PAX6-237ENST00000638696 MAGI3Q5TCQ9 1506 aa21.36■■□□□ 1.01
PAX6-237ENST00000638696 HECW2Q9P2P5 1572 aa21.36■■□□□ 1.01
PAX6-237ENST00000638696 CFAP43Q8NDM7 1665 aa21.35■■□□□ 1.01
PAX6-237ENST00000638696 CDK11AQ9UQ88 783 aaPredicted RBP21.35■■□□□ 1.01
PAX6-237ENST00000638696 CLIP1P30622 1438 aa21.35■■□□□ 1.01
PAX6-237ENST00000638696 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
PAX6-237ENST00000638696 CDK13Q14004 1512 aaKnown RBP21.32■■□□□ 1
PAX6-237ENST00000638696 LOC105371045A0A1W2PR82 267 aa21.31■■□□□ 1
PAX6-237ENST00000638696 HECW1Q76N89 1606 aa21.29■■□□□ 1
PAX6-237ENST00000638696 ABCA9Q8IUA7 1624 aa21.28■■□□□ 1
PAX6-237ENST00000638696 PHLDB1Q86UU1 1377 aa21.25■□□□□ 0.99
PAX6-237ENST00000638696 CASKIN1Q8WXD9 1431 aa21.25■□□□□ 0.99
PAX6-237ENST00000638696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.19■□□□□ 0.98
PAX6-237ENST00000638696 RAPGEF3O95398 923 aa21.19■□□□□ 0.98
PAX6-237ENST00000638696 CEP162Q5TB80 1403 aa21.19■□□□□ 0.98
PAX6-237ENST00000638696 NEO1Q92859 1461 aa21.19■□□□□ 0.98
PAX6-237ENST00000638696 ARAP3Q8WWN8 1544 aa21.19■□□□□ 0.98
PAX6-237ENST00000638696 FBXO41Q8TF61 875 aa21.17■□□□□ 0.98
PAX6-237ENST00000638696 TROQ12816 1431 aaPredicted RBP21.17■□□□□ 0.98
PAX6-237ENST00000638696 PCF11O94913 1555 aaKnown RBP21.16■□□□□ 0.98
PAX6-237ENST00000638696 CCDC18Q5T9S5 1454 aa21.16■□□□□ 0.98
PAX6-237ENST00000638696 FYCO1Q9BQS8 1478 aa21.15■□□□□ 0.98
PAX6-237ENST00000638696 EFCAB2Q5VUJ9 269 aa21.14■□□□□ 0.97
PAX6-237ENST00000638696 FANCAO15360 1455 aa21.13■□□□□ 0.97
PAX6-237ENST00000638696 AKNAQ7Z591 1439 aa21.13■□□□□ 0.97
PAX6-237ENST00000638696 TTC37Q6PGP7 1564 aa21.13■□□□□ 0.97
PAX6-237ENST00000638696 PLCH2O75038 1416 aa21.12■□□□□ 0.97
PAX6-237ENST00000638696 LRRIQ1Q96JM4 1722 aa21.1■□□□□ 0.97
PAX6-237ENST00000638696 KIF14Q15058 1648 aa21.08■□□□□ 0.97
PAX6-237ENST00000638696 DENND4BO75064 1496 aaPredicted RBP21.07■□□□□ 0.96
PAX6-237ENST00000638696 CFAP74Q9C0B2 1584 aa21.05■□□□□ 0.96
PAX6-237ENST00000638696 SCAPERQ9BY12 1400 aa21.04■□□□□ 0.96
PAX6-237ENST00000638696 MTUS2Q5JR59 1369 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms