RNA–Protein interactions for RNA: ENST00000638252.1

KCNMA1-230, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-230ENST00000638252 CEP164Q9UPV0 1460 aa12.44□□□□□ -0.42
KCNMA1-230ENST00000638252 TRIM52Q96A61 297 aa12.43□□□□□ -0.42
KCNMA1-230ENST00000638252 IRX6P78412 446 aaPredicted RBP12.41□□□□□ -0.42
KCNMA1-230ENST00000638252 CFTRP13569 1480 aa12.39□□□□□ -0.43
KCNMA1-230ENST00000638252 PKNOX2Q96KN3 472 aa12.37□□□□□ -0.43
KCNMA1-230ENST00000638252 NOP58Q9Y2X3 529 aaKnown RBP12.36□□□□□ -0.43
KCNMA1-230ENST00000638252 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
KCNMA1-230ENST00000638252 CUX1P39880 1505 aa12.34□□□□□ -0.43
KCNMA1-230ENST00000638252 RANGAP1P46060 587 aaPredicted RBP12.3□□□□□ -0.44
KCNMA1-230ENST00000638252 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
KCNMA1-230ENST00000638252 RAPGEF2Q9Y4G8 1499 aa12.29□□□□□ -0.44
KCNMA1-230ENST00000638252 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
KCNMA1-230ENST00000638252 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-230ENST00000638252 CLIP1P30622 1438 aa12.26□□□□□ -0.45
KCNMA1-230ENST00000638252 VPS8Q8N3P4 1428 aa12.25□□□□□ -0.45
KCNMA1-230ENST00000638252 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
KCNMA1-230ENST00000638252 TIMELESSQ9UNS1 1208 aa12.24□□□□□ -0.45
KCNMA1-230ENST00000638252 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
KCNMA1-230ENST00000638252 ZBTB47Q9UFB7 747 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-230ENST00000638252 ANP32AP39687 249 aaKnown RBP12.21□□□□□ -0.45
KCNMA1-230ENST00000638252 KIF27Q86VH2 1401 aa12.21□□□□□ -0.45
KCNMA1-230ENST00000638252 CADPSQ9ULU8 1353 aa12.2□□□□□ -0.46
KCNMA1-230ENST00000638252 PODXL2Q9NZ53 605 aa12.19□□□□□ -0.46
KCNMA1-230ENST00000638252 B4GALNT3Q6L9W6 998 aa12.18□□□□□ -0.46
KCNMA1-230ENST00000638252 ANP32CO43423 234 aa12.17□□□□□ -0.46
KCNMA1-230ENST00000638252 GLIPR1L2Q4G1C9 344 aa12.16□□□□□ -0.46
KCNMA1-230ENST00000638252 HNRNPUQ00839 825 aaKnown RBP eCLIP12.16□□□□□ -0.46
KCNMA1-230ENST00000638252 ARAP1Q96P48 1450 aa12.15□□□□□ -0.46
KCNMA1-230ENST00000638252 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
KCNMA1-230ENST00000638252 NEFMP07197 916 aa12.14□□□□□ -0.47
KCNMA1-230ENST00000638252 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
KCNMA1-230ENST00000638252 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
KCNMA1-230ENST00000638252 PPP4R2Q9NY27 417 aa12.13□□□□□ -0.47
KCNMA1-230ENST00000638252 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
KCNMA1-230ENST00000638252 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
KCNMA1-230ENST00000638252 HIRIP3Q9BW71 556 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-230ENST00000638252 IPO9Q96P70 1041 aaKnown RBP12.11□□□□□ -0.47
KCNMA1-230ENST00000638252 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
KCNMA1-230ENST00000638252 FGD5Q6ZNL6 1462 aa12.1□□□□□ -0.47
KCNMA1-230ENST00000638252 FANCD2Q9BXW9 1451 aa12.09□□□□□ -0.47
KCNMA1-230ENST00000638252 CUX2O14529 1486 aa12.07□□□□□ -0.48
KCNMA1-230ENST00000638252 LAMC3Q9Y6N6 1575 aa12.07□□□□□ -0.48
KCNMA1-230ENST00000638252 IGF1RP08069 1367 aa12.06□□□□□ -0.48
KCNMA1-230ENST00000638252 ZMYND15Q9H091 742 aa12.05□□□□□ -0.48
KCNMA1-230ENST00000638252 ARHGAP35Q9NRY4 1499 aa12.05□□□□□ -0.48
KCNMA1-230ENST00000638252 WDR97A6NE52 1622 aa12.05□□□□□ -0.48
KCNMA1-230ENST00000638252 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
KCNMA1-230ENST00000638252 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
KCNMA1-230ENST00000638252 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
KCNMA1-230ENST00000638252 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
KCNMA1-230ENST00000638252 CCER2I3L3R5 266 aa12.02□□□□□ -0.48
KCNMA1-230ENST00000638252 TOPBP1Q92547 1522 aa12.02□□□□□ -0.48
KCNMA1-230ENST00000638252 CUL7Q14999 1698 aa12.02□□□□□ -0.49
KCNMA1-230ENST00000638252 POLA1P09884 1462 aaPredicted RBP11.99□□□□□ -0.49
KCNMA1-230ENST00000638252 RRBP1Q9P2E9 1410 aaKnown RBP11.99□□□□□ -0.49
KCNMA1-230ENST00000638252 CARMIL1Q5VZK9 1371 aa11.98□□□□□ -0.49
KCNMA1-230ENST00000638252 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
KCNMA1-230ENST00000638252 CFAP43Q8NDM7 1665 aa11.96□□□□□ -0.49
KCNMA1-230ENST00000638252 CTTNBP2Q8WZ74 1663 aa11.96□□□□□ -0.49
KCNMA1-230ENST00000638252 NESP48681 1621 aa11.96□□□□□ -0.5
KCNMA1-230ENST00000638252 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.5
KCNMA1-230ENST00000638252 A0A0U1RQG5 324 aaPredicted RBP11.96□□□□□ -0.5
KCNMA1-230ENST00000638252 C11orf95C9JLR9 678 aaPredicted RBP11.96□□□□□ -0.5
KCNMA1-230ENST00000638252 TIAM1Q13009 1591 aa11.95□□□□□ -0.5
KCNMA1-230ENST00000638252 SIN3AQ96ST3 1273 aa11.95□□□□□ -0.5
KCNMA1-230ENST00000638252 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
KCNMA1-230ENST00000638252 GSE1Q14687 1217 aa11.95□□□□□ -0.5
KCNMA1-230ENST00000638252 EFCAB5A4FU69 1503 aa11.95□□□□□ -0.5
KCNMA1-230ENST00000638252 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-230ENST00000638252 PPP1R15AO75807 674 aaPredicted RBP11.94□□□□□ -0.5
KCNMA1-230ENST00000638252 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
KCNMA1-230ENST00000638252 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
KCNMA1-230ENST00000638252 RAD54L2Q9Y4B4 1467 aa11.92□□□□□ -0.5
KCNMA1-230ENST00000638252 WASHC2CQ9Y4E1 1318 aa11.91□□□□□ -0.5
KCNMA1-230ENST00000638252 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.5
KCNMA1-230ENST00000638252 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.51
KCNMA1-230ENST00000638252 FHAD1B1AJZ9 1412 aa11.89□□□□□ -0.51
KCNMA1-230ENST00000638252 KIF21AQ7Z4S6 1674 aa11.89□□□□□ -0.51
KCNMA1-230ENST00000638252 KANK4Q5T7N3 995 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-230ENST00000638252 FRAT1Q92837 279 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-230ENST00000638252 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
KCNMA1-230ENST00000638252 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
KCNMA1-230ENST00000638252 HSP90AA2PQ14568 343 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-230ENST00000638252 NAP1L5Q96NT1 182 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-230ENST00000638252 DNAJC5BQ9UF47 199 aa11.88□□□□□ -0.51
KCNMA1-230ENST00000638252 FYCO1Q9BQS8 1478 aa11.87□□□□□ -0.51
KCNMA1-230ENST00000638252 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-230ENST00000638252 LRRC9Q6ZRR7 1453 aa11.86□□□□□ -0.51
KCNMA1-230ENST00000638252 SAMD9Q5K651 1589 aa11.86□□□□□ -0.51
KCNMA1-230ENST00000638252 CCNB3Q8WWL7 1395 aa11.85□□□□□ -0.51
KCNMA1-230ENST00000638252 FAM43AQ8N2R8 423 aa11.84□□□□□ -0.51
KCNMA1-230ENST00000638252 CASKIN1Q8WXD9 1431 aa11.83□□□□□ -0.52
KCNMA1-230ENST00000638252 CNGB1Q14028 1251 aaPredicted RBP11.82□□□□□ -0.52
KCNMA1-230ENST00000638252 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
KCNMA1-230ENST00000638252 GAPVD1Q14C86 1478 aa11.81□□□□□ -0.52
KCNMA1-230ENST00000638252 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-230ENST00000638252 ARXQ96QS3 562 aa11.81□□□□□ -0.52
KCNMA1-230ENST00000638252 NFKBIBQ15653 356 aa11.81□□□□□ -0.52
KCNMA1-230ENST00000638252 PBRM1Q86U86 1689 aa11.8□□□□□ -0.52
KCNMA1-230ENST00000638252 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms