RNA–Protein interactions for RNA: ENST00000638252.1

KCNMA1-230, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-230ENST00000638252 NISCHQ9Y2I1 1504 aa17.1■□□□□ 0.33
KCNMA1-230ENST00000638252 PELP1Q8IZL8 1130 aaKnown RBP15.17■□□□□ 0.02
KCNMA1-230ENST00000638252 HRCP23327 699 aa14.94□□□□□ -0.02
KCNMA1-230ENST00000638252 CCDC180Q9P1Z9 1646 aa14.79□□□□□ -0.04
KCNMA1-230ENST00000638252 PPARGC1BQ86YN6 1023 aaKnown RBP14.77□□□□□ -0.04
KCNMA1-230ENST00000638252 MYT1Q01538 1121 aa14.72□□□□□ -0.05
KCNMA1-230ENST00000638252 PCGF6Q9BYE7 350 aa14.61□□□□□ -0.07
KCNMA1-230ENST00000638252 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
KCNMA1-230ENST00000638252 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
KCNMA1-230ENST00000638252 DCAF1Q9Y4B6 1507 aa14.21□□□□□ -0.13
KCNMA1-230ENST00000638252 SHROOM4Q9ULL8 1493 aa14.16□□□□□ -0.14
KCNMA1-230ENST00000638252 DCAF8L2P0C7V8 631 aa14.15□□□□□ -0.14
KCNMA1-230ENST00000638252 SUPT5HO00267 1087 aaKnown RBP14.13□□□□□ -0.15
KCNMA1-230ENST00000638252 GTF3C3Q9Y5Q9 886 aa13.97□□□□□ -0.17
KCNMA1-230ENST00000638252 ACIN1Q9UKV3 1341 aaKnown RBP13.95□□□□□ -0.18
KCNMA1-230ENST00000638252 NEUROD1Q13562 356 aa13.92□□□□□ -0.18
KCNMA1-230ENST00000638252 MYO15BQ96JP2 1530 aa13.89□□□□□ -0.19
KCNMA1-230ENST00000638252 ZEB1P37275 1124 aaPredicted RBP13.89□□□□□ -0.19
KCNMA1-230ENST00000638252 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
KCNMA1-230ENST00000638252 TRIM26Q12899 539 aaPredicted RBP13.84□□□□□ -0.19
KCNMA1-230ENST00000638252 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
KCNMA1-230ENST00000638252 CHIC1Q5VXU3 224 aa13.79□□□□□ -0.2
KCNMA1-230ENST00000638252 BCL11AQ9H165 835 aa13.78□□□□□ -0.2
KCNMA1-230ENST00000638252 LOC105371045A0A1W2PR82 267 aa13.7□□□□□ -0.22
KCNMA1-230ENST00000638252 ABCC9O60706 1549 aa13.67□□□□□ -0.22
KCNMA1-230ENST00000638252 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
KCNMA1-230ENST00000638252 NACADO15069 1562 aa13.62□□□□□ -0.23
KCNMA1-230ENST00000638252 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
KCNMA1-230ENST00000638252 SCRIBQ14160 1630 aa13.56□□□□□ -0.24
KCNMA1-230ENST00000638252 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
KCNMA1-230ENST00000638252 DIEXFQ68CQ4 756 aaKnown RBP13.54□□□□□ -0.24
KCNMA1-230ENST00000638252 ANP32EQ9BTT0 268 aa13.44□□□□□ -0.26
KCNMA1-230ENST00000638252 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-230ENST00000638252 CCER1Q8TC90 406 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-230ENST00000638252 RB1CC1Q8TDY2 1594 aa13.38□□□□□ -0.27
KCNMA1-230ENST00000638252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
KCNMA1-230ENST00000638252 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
KCNMA1-230ENST00000638252 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
KCNMA1-230ENST00000638252 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
KCNMA1-230ENST00000638252 MROH2BQ7Z745 1585 aa13.21□□□□□ -0.29
KCNMA1-230ENST00000638252 CECR2Q9BXF3 1484 aa13.21□□□□□ -0.29
KCNMA1-230ENST00000638252 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.3
KCNMA1-230ENST00000638252 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
KCNMA1-230ENST00000638252 WIZO95785 1651 aa13.14□□□□□ -0.31
KCNMA1-230ENST00000638252 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
KCNMA1-230ENST00000638252 MIER1Q8N108 512 aa13.11□□□□□ -0.31
KCNMA1-230ENST00000638252 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-230ENST00000638252 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-230ENST00000638252 SMARCA4P51532 1647 aa13.07□□□□□ -0.32
KCNMA1-230ENST00000638252 SUPT16HQ9Y5B9 1047 aaKnown RBP13.07□□□□□ -0.32
KCNMA1-230ENST00000638252 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
KCNMA1-230ENST00000638252 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
KCNMA1-230ENST00000638252 BICRAQ9NZM4 1560 aa13.01□□□□□ -0.33
KCNMA1-230ENST00000638252 BCANQ96GW7 911 aa13□□□□□ -0.33
KCNMA1-230ENST00000638252 PEG3Q9GZU2 1588 aa12.95□□□□□ -0.34
KCNMA1-230ENST00000638252 APLP2Q06481 763 aa12.95□□□□□ -0.34
KCNMA1-230ENST00000638252 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
KCNMA1-230ENST00000638252 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
KCNMA1-230ENST00000638252 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
KCNMA1-230ENST00000638252 CCDC88BA6NC98 1476 aa12.86□□□□□ -0.35
KCNMA1-230ENST00000638252 RBM19Q9Y4C8 960 aaKnown RBP12.84□□□□□ -0.35
KCNMA1-230ENST00000638252 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
KCNMA1-230ENST00000638252 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
KCNMA1-230ENST00000638252 FKBP8Q14318 412 aa12.77□□□□□ -0.37
KCNMA1-230ENST00000638252 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-230ENST00000638252 ITGAEP38570 1179 aa12.73□□□□□ -0.37
KCNMA1-230ENST00000638252 SALL2Q9Y467 1007 aaPredicted RBP12.72□□□□□ -0.37
KCNMA1-230ENST00000638252 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
KCNMA1-230ENST00000638252 NEFLP07196 543 aa12.72□□□□□ -0.37
KCNMA1-230ENST00000638252 ATAD2BQ9ULI0 1458 aa12.71□□□□□ -0.37
KCNMA1-230ENST00000638252 MSH5O43196 834 aa12.69□□□□□ -0.38
KCNMA1-230ENST00000638252 EEA1Q15075 1411 aa12.66□□□□□ -0.38
KCNMA1-230ENST00000638252 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.38
KCNMA1-230ENST00000638252 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
KCNMA1-230ENST00000638252 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
KCNMA1-230ENST00000638252 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
KCNMA1-230ENST00000638252 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
KCNMA1-230ENST00000638252 NBR1Q14596 966 aa12.61□□□□□ -0.39
KCNMA1-230ENST00000638252 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
KCNMA1-230ENST00000638252 WRNQ14191 1432 aaPredicted RBP eCLIP12.57□□□□□ -0.4
KCNMA1-230ENST00000638252 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
KCNMA1-230ENST00000638252 SOGA1O94964 1423 aa12.55□□□□□ -0.4
KCNMA1-230ENST00000638252 EIF5BO60841 1220 aaKnown RBP12.55□□□□□ -0.4
KCNMA1-230ENST00000638252 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
KCNMA1-230ENST00000638252 UBE2Q2Q8WVN8 375 aa12.54□□□□□ -0.4
KCNMA1-230ENST00000638252 CDK11AQ9UQ88 783 aaPredicted RBP12.53□□□□□ -0.4
KCNMA1-230ENST00000638252 KIF21BO75037 1637 aa12.52□□□□□ -0.4
KCNMA1-230ENST00000638252 TNIKQ9UKE5 1360 aa12.52□□□□□ -0.41
KCNMA1-230ENST00000638252 KCNH8Q96L42 1107 aa12.52□□□□□ -0.41
KCNMA1-230ENST00000638252 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
KCNMA1-230ENST00000638252 TOP2BQ02880 1626 aa12.5□□□□□ -0.41
KCNMA1-230ENST00000638252 ERICH6BQ5W0A0 696 aa12.5□□□□□ -0.41
KCNMA1-230ENST00000638252 GOLGA3Q08378 1498 aa12.48□□□□□ -0.41
KCNMA1-230ENST00000638252 RUSC2Q8N2Y8 1516 aa12.48□□□□□ -0.41
KCNMA1-230ENST00000638252 RTL5Q5HYW3 569 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-230ENST00000638252 CEP162Q5TB80 1403 aa12.47□□□□□ -0.41
KCNMA1-230ENST00000638252 FANCIQ9NVI1 1328 aa12.47□□□□□ -0.41
KCNMA1-230ENST00000638252 IL27Q8NEV9 243 aa12.47□□□□□ -0.41
KCNMA1-230ENST00000638252 PRDM2Q13029 1718 aa12.46□□□□□ -0.42
KCNMA1-230ENST00000638252 UBTFP17480 764 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms