RNA–Protein interactions for RNA: ENST00000638203.1

KCNMA1-227, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-227ENST00000638203 IRX6P78412 446 aaPredicted RBP18.52■□□□□ 0.56
KCNMA1-227ENST00000638203 RRBP1Q9P2E9 1410 aaKnown RBP18.51■□□□□ 0.55
KCNMA1-227ENST00000638203 ARHGAP35Q9NRY4 1499 aa18.51■□□□□ 0.55
KCNMA1-227ENST00000638203 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
KCNMA1-227ENST00000638203 KCNH8Q96L42 1107 aa18.5■□□□□ 0.55
KCNMA1-227ENST00000638203 SIN3AQ96ST3 1273 aa18.48■□□□□ 0.55
KCNMA1-227ENST00000638203 MAP3K1Q13233 1512 aa18.47■□□□□ 0.55
KCNMA1-227ENST00000638203 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
KCNMA1-227ENST00000638203 IGF1RP08069 1367 aa18.46■□□□□ 0.55
KCNMA1-227ENST00000638203 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
KCNMA1-227ENST00000638203 CC2D2AQ9P2K1 1620 aa18.43■□□□□ 0.54
KCNMA1-227ENST00000638203 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
KCNMA1-227ENST00000638203 DHX57Q6P158 1386 aaKnown RBP18.41■□□□□ 0.54
KCNMA1-227ENST00000638203 ANP32CO43423 234 aa18.39■□□□□ 0.53
KCNMA1-227ENST00000638203 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
KCNMA1-227ENST00000638203 SUPT16HQ9Y5B9 1047 aaKnown RBP18.38■□□□□ 0.53
KCNMA1-227ENST00000638203 TIAM1Q13009 1591 aa18.38■□□□□ 0.53
KCNMA1-227ENST00000638203 FHAD1B1AJZ9 1412 aa18.38■□□□□ 0.53
KCNMA1-227ENST00000638203 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
KCNMA1-227ENST00000638203 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
KCNMA1-227ENST00000638203 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
KCNMA1-227ENST00000638203 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
KCNMA1-227ENST00000638203 CUL7Q14999 1698 aa18.31■□□□□ 0.52
KCNMA1-227ENST00000638203 CFAP43Q8NDM7 1665 aa18.3■□□□□ 0.52
KCNMA1-227ENST00000638203 EFCAB5A4FU69 1503 aa18.29■□□□□ 0.52
KCNMA1-227ENST00000638203 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
KCNMA1-227ENST00000638203 LRRC9Q6ZRR7 1453 aa18.28■□□□□ 0.52
KCNMA1-227ENST00000638203 TOPBP1Q92547 1522 aa18.27■□□□□ 0.51
KCNMA1-227ENST00000638203 FAM9BQ8IZU0 186 aa18.23■□□□□ 0.51
KCNMA1-227ENST00000638203 CTTNBP2Q8WZ74 1663 aa18.23■□□□□ 0.51
KCNMA1-227ENST00000638203 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
KCNMA1-227ENST00000638203 PCF11O94913 1555 aaKnown RBP18.22■□□□□ 0.51
KCNMA1-227ENST00000638203 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
KCNMA1-227ENST00000638203 FYCO1Q9BQS8 1478 aa18.22■□□□□ 0.51
KCNMA1-227ENST00000638203 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.51
KCNMA1-227ENST00000638203 SETD5Q9C0A6 1442 aa18.19■□□□□ 0.5
KCNMA1-227ENST00000638203 RAB3GAP2Q9H2M9 1393 aa18.18■□□□□ 0.5
KCNMA1-227ENST00000638203 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
KCNMA1-227ENST00000638203 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
KCNMA1-227ENST00000638203 CASKIN1Q8WXD9 1431 aa18.17■□□□□ 0.5
KCNMA1-227ENST00000638203 SALL2Q9Y467 1007 aaPredicted RBP18.16■□□□□ 0.5
KCNMA1-227ENST00000638203 FMN1Q68DA7 1419 aa18.15■□□□□ 0.5
KCNMA1-227ENST00000638203 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
KCNMA1-227ENST00000638203 TONSLQ96HA7 1378 aa18.14■□□□□ 0.49
KCNMA1-227ENST00000638203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.14■□□□□ 0.49
KCNMA1-227ENST00000638203 PHLDB1Q86UU1 1377 aa18.13■□□□□ 0.49
KCNMA1-227ENST00000638203 FHOD3Q2V2M9 1422 aa18.12■□□□□ 0.49
KCNMA1-227ENST00000638203 NESP48681 1621 aa18.11■□□□□ 0.49
KCNMA1-227ENST00000638203 TSHZ2Q9NRE2 1034 aa18.11■□□□□ 0.49
KCNMA1-227ENST00000638203 MAPKBP1O60336 1514 aa18.09■□□□□ 0.49
KCNMA1-227ENST00000638203 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
KCNMA1-227ENST00000638203 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.49
KCNMA1-227ENST00000638203 ZNF777Q9ULD5 760 aaPredicted RBP18.08■□□□□ 0.48
KCNMA1-227ENST00000638203 ABCA5Q8WWZ7 1642 aa18.07■□□□□ 0.48
KCNMA1-227ENST00000638203 TIMELESSQ9UNS1 1208 aa18.07■□□□□ 0.48
KCNMA1-227ENST00000638203 URB2Q14146 1524 aaKnown RBP18.06■□□□□ 0.48
KCNMA1-227ENST00000638203 FBLN2P98095 1184 aa18.05■□□□□ 0.48
KCNMA1-227ENST00000638203 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
KCNMA1-227ENST00000638203 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
KCNMA1-227ENST00000638203 GAPVD1Q14C86 1478 aa18.03■□□□□ 0.48
KCNMA1-227ENST00000638203 SAMD9Q5K651 1589 aa18.03■□□□□ 0.48
KCNMA1-227ENST00000638203 FOXD1Q16676 465 aa18.03■□□□□ 0.48
KCNMA1-227ENST00000638203 MTUS2Q5JR59 1369 aa18■□□□□ 0.47
KCNMA1-227ENST00000638203 SNAPC4Q5SXM2 1469 aa18■□□□□ 0.47
KCNMA1-227ENST00000638203 NBR1Q14596 966 aa17.99■□□□□ 0.47
KCNMA1-227ENST00000638203 FGD6Q6ZV73 1430 aa17.99■□□□□ 0.47
KCNMA1-227ENST00000638203 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
KCNMA1-227ENST00000638203 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
KCNMA1-227ENST00000638203 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
KCNMA1-227ENST00000638203 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-227ENST00000638203 EHBP1L1Q8N3D4 1523 aa17.95■□□□□ 0.46
KCNMA1-227ENST00000638203 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-227ENST00000638203 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
KCNMA1-227ENST00000638203 RBM19Q9Y4C8 960 aaKnown RBP17.92■□□□□ 0.46
KCNMA1-227ENST00000638203 B4GALNT3Q6L9W6 998 aa17.92■□□□□ 0.46
KCNMA1-227ENST00000638203 CCDC18Q5T9S5 1454 aa17.91■□□□□ 0.46
KCNMA1-227ENST00000638203 MYOM3Q5VTT5 1437 aa17.9■□□□□ 0.46
KCNMA1-227ENST00000638203 KDM2AQ9Y2K7 1162 aa17.9■□□□□ 0.46
KCNMA1-227ENST00000638203 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
KCNMA1-227ENST00000638203 HFM1A2PYH4 1435 aa17.89■□□□□ 0.45
KCNMA1-227ENST00000638203 NCOA2Q15596 1464 aa17.88■□□□□ 0.45
KCNMA1-227ENST00000638203 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
KCNMA1-227ENST00000638203 LRRIQ1Q96JM4 1722 aa17.87■□□□□ 0.45
KCNMA1-227ENST00000638203 UACAQ9BZF9 1416 aa17.86■□□□□ 0.45
KCNMA1-227ENST00000638203 HECW1Q76N89 1606 aa17.86■□□□□ 0.45
KCNMA1-227ENST00000638203 PTPN23Q9H3S7 1636 aa17.86■□□□□ 0.45
KCNMA1-227ENST00000638203 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
KCNMA1-227ENST00000638203 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
KCNMA1-227ENST00000638203 DAXXQ9UER7 740 aaPredicted RBP17.84■□□□□ 0.45
KCNMA1-227ENST00000638203 UGGT2Q9NYU1 1516 aa17.83■□□□□ 0.44
KCNMA1-227ENST00000638203 PPP1R15AO75807 674 aaPredicted RBP17.83■□□□□ 0.44
KCNMA1-227ENST00000638203 IQGAP2Q13576 1575 aa17.82■□□□□ 0.44
KCNMA1-227ENST00000638203 ADAMTS12P58397 1594 aa17.8■□□□□ 0.44
KCNMA1-227ENST00000638203 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
KCNMA1-227ENST00000638203 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
KCNMA1-227ENST00000638203 NAIPQ13075 1403 aa17.78■□□□□ 0.44
KCNMA1-227ENST00000638203 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
KCNMA1-227ENST00000638203 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.44
KCNMA1-227ENST00000638203 TCOF1Q13428 1488 aaKnown RBP17.77■□□□□ 0.44
KCNMA1-227ENST00000638203 HSPA5P11021 654 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms