RNA–Protein interactions for RNA: ENST00000638203.1

KCNMA1-227, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-227ENST00000638203 NISCHQ9Y2I1 1504 aa26.01■■□□□ 1.75
KCNMA1-227ENST00000638203 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
KCNMA1-227ENST00000638203 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
KCNMA1-227ENST00000638203 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
KCNMA1-227ENST00000638203 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
KCNMA1-227ENST00000638203 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
KCNMA1-227ENST00000638203 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
KCNMA1-227ENST00000638203 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
KCNMA1-227ENST00000638203 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
KCNMA1-227ENST00000638203 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
KCNMA1-227ENST00000638203 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
KCNMA1-227ENST00000638203 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
KCNMA1-227ENST00000638203 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
KCNMA1-227ENST00000638203 TTBK1Q5TCY1 1321 aaPredicted RBP20.98■□□□□ 0.95
KCNMA1-227ENST00000638203 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
KCNMA1-227ENST00000638203 HRCP23327 699 aa20.91■□□□□ 0.94
KCNMA1-227ENST00000638203 ABCC9O60706 1549 aa20.79■□□□□ 0.92
KCNMA1-227ENST00000638203 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
KCNMA1-227ENST00000638203 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
KCNMA1-227ENST00000638203 NACADO15069 1562 aa20.58■□□□□ 0.89
KCNMA1-227ENST00000638203 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
KCNMA1-227ENST00000638203 RB1CC1Q8TDY2 1594 aa20.4■□□□□ 0.86
KCNMA1-227ENST00000638203 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
KCNMA1-227ENST00000638203 RANGAP1P46060 587 aaPredicted RBP20.35■□□□□ 0.85
KCNMA1-227ENST00000638203 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.83
KCNMA1-227ENST00000638203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
KCNMA1-227ENST00000638203 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
KCNMA1-227ENST00000638203 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
KCNMA1-227ENST00000638203 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
KCNMA1-227ENST00000638203 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
KCNMA1-227ENST00000638203 WIZO95785 1651 aa20.03■□□□□ 0.8
KCNMA1-227ENST00000638203 ZEB1P37275 1124 aaPredicted RBP19.99■□□□□ 0.79
KCNMA1-227ENST00000638203 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
KCNMA1-227ENST00000638203 TOP2AP11388 1531 aaKnown RBP19.85■□□□□ 0.77
KCNMA1-227ENST00000638203 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
KCNMA1-227ENST00000638203 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
KCNMA1-227ENST00000638203 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
KCNMA1-227ENST00000638203 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
KCNMA1-227ENST00000638203 APLP2Q06481 763 aa19.74■□□□□ 0.75
KCNMA1-227ENST00000638203 CENPBP07199 599 aaPredicted RBP19.7■□□□□ 0.74
KCNMA1-227ENST00000638203 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
KCNMA1-227ENST00000638203 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
KCNMA1-227ENST00000638203 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
KCNMA1-227ENST00000638203 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
KCNMA1-227ENST00000638203 GTF3C3Q9Y5Q9 886 aa19.6■□□□□ 0.73
KCNMA1-227ENST00000638203 ITGAEP38570 1179 aa19.55■□□□□ 0.72
KCNMA1-227ENST00000638203 EEA1Q15075 1411 aa19.54■□□□□ 0.72
KCNMA1-227ENST00000638203 ABCC8Q09428 1581 aa19.52■□□□□ 0.72
KCNMA1-227ENST00000638203 BICRAQ9NZM4 1560 aa19.52■□□□□ 0.72
KCNMA1-227ENST00000638203 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
KCNMA1-227ENST00000638203 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
KCNMA1-227ENST00000638203 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
KCNMA1-227ENST00000638203 ATP1B4Q9UN42 357 aaPredicted RBP19.47■□□□□ 0.71
KCNMA1-227ENST00000638203 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
KCNMA1-227ENST00000638203 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
KCNMA1-227ENST00000638203 TNIKQ9UKE5 1360 aa19.38■□□□□ 0.69
KCNMA1-227ENST00000638203 ACIN1Q9UKV3 1341 aaKnown RBP19.37■□□□□ 0.69
KCNMA1-227ENST00000638203 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
KCNMA1-227ENST00000638203 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.68
KCNMA1-227ENST00000638203 SOGA1O94964 1423 aa19.32■□□□□ 0.68
KCNMA1-227ENST00000638203 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
KCNMA1-227ENST00000638203 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
KCNMA1-227ENST00000638203 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.68
KCNMA1-227ENST00000638203 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
KCNMA1-227ENST00000638203 KIF21BO75037 1637 aa19.19■□□□□ 0.66
KCNMA1-227ENST00000638203 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
KCNMA1-227ENST00000638203 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
KCNMA1-227ENST00000638203 ZNF316A6NFI3 1004 aaPredicted RBP19.15■□□□□ 0.66
KCNMA1-227ENST00000638203 BCANQ96GW7 911 aa19.13■□□□□ 0.65
KCNMA1-227ENST00000638203 MIER1Q8N108 512 aa19.09■□□□□ 0.65
KCNMA1-227ENST00000638203 CNGB1Q14028 1251 aaPredicted RBP19.07■□□□□ 0.64
KCNMA1-227ENST00000638203 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
KCNMA1-227ENST00000638203 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
KCNMA1-227ENST00000638203 CLIP1P30622 1438 aa19.01■□□□□ 0.63
KCNMA1-227ENST00000638203 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
KCNMA1-227ENST00000638203 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
KCNMA1-227ENST00000638203 VPS8Q8N3P4 1428 aa18.96■□□□□ 0.63
KCNMA1-227ENST00000638203 ERICH6Q7L0X2 663 aa18.92■□□□□ 0.62
KCNMA1-227ENST00000638203 ERICH3Q5RHP9 1530 aa18.91■□□□□ 0.62
KCNMA1-227ENST00000638203 P3H3Q8IVL6 736 aa18.91■□□□□ 0.62
KCNMA1-227ENST00000638203 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
KCNMA1-227ENST00000638203 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
KCNMA1-227ENST00000638203 HIRIP3Q9BW71 556 aaPredicted RBP18.87■□□□□ 0.61
KCNMA1-227ENST00000638203 PRXQ9BXM0 1461 aa18.8■□□□□ 0.6
KCNMA1-227ENST00000638203 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
KCNMA1-227ENST00000638203 KIF27Q86VH2 1401 aa18.78■□□□□ 0.6
KCNMA1-227ENST00000638203 CFTRP13569 1480 aa18.78■□□□□ 0.6
KCNMA1-227ENST00000638203 CUX1P39880 1505 aa18.76■□□□□ 0.59
KCNMA1-227ENST00000638203 NEFLP07196 543 aa18.76■□□□□ 0.59
KCNMA1-227ENST00000638203 POLR3GLQ9BT43 218 aa18.74■□□□□ 0.59
KCNMA1-227ENST00000638203 MYT1Q01538 1121 aa18.72■□□□□ 0.59
KCNMA1-227ENST00000638203 ARID3CA6NKF2 412 aa18.69■□□□□ 0.58
KCNMA1-227ENST00000638203 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
KCNMA1-227ENST00000638203 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
KCNMA1-227ENST00000638203 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
KCNMA1-227ENST00000638203 CLSPNQ9HAW4 1339 aa18.61■□□□□ 0.57
KCNMA1-227ENST00000638203 FKBP8Q14318 412 aa18.57■□□□□ 0.56
KCNMA1-227ENST00000638203 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
KCNMA1-227ENST00000638203 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
KCNMA1-227ENST00000638203 CUX2O14529 1486 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms