RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 SHROOM2Q13796 1616 aa28.99■■■□□ 2.23
CTSD-214ENST00000637937 PRG4Q92954 1404 aaPredicted RBP28.99■■■□□ 2.23
CTSD-214ENST00000637937 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
CTSD-214ENST00000637937 KIAA0586Q9BVV6 1533 aa28.9■■■□□ 2.22
CTSD-214ENST00000637937 RAPGEF2Q9Y4G8 1499 aa28.75■■■□□ 2.19
CTSD-214ENST00000637937 TTBK1Q5TCY1 1321 aaPredicted RBP28.67■■■□□ 2.18
CTSD-214ENST00000637937 NPM1P06748 294 aaKnown RBP eCLIP28.66■■■□□ 2.18
CTSD-214ENST00000637937 IQGAP2Q13576 1575 aa28.66■■■□□ 2.18
CTSD-214ENST00000637937 CARMIL2Q6F5E8 1435 aa28.65■■■□□ 2.18
CTSD-214ENST00000637937 PTPRGP23470 1445 aa28.61■■■□□ 2.17
CTSD-214ENST00000637937 TNIKQ9UKE5 1360 aa28.58■■■□□ 2.17
CTSD-214ENST00000637937 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
CTSD-214ENST00000637937 ADCY10Q96PN6 1610 aa28.51■■■□□ 2.15
CTSD-214ENST00000637937 CSRNP3Q8WYN3 585 aa28.51■■■□□ 2.15
CTSD-214ENST00000637937 DISP1Q96F81 1524 aa28.49■■■□□ 2.15
CTSD-214ENST00000637937 UGGT2Q9NYU1 1516 aa28.48■■■□□ 2.15
CTSD-214ENST00000637937 FAM69CQ0P6D2 419 aa28.43■■■□□ 2.14
CTSD-214ENST00000637937 FAM9AQ8IZU1 332 aaPredicted RBP28.41■■■□□ 2.14
CTSD-214ENST00000637937 MAPKBP1O60336 1514 aa28.41■■■□□ 2.14
CTSD-214ENST00000637937 EEA1Q15075 1411 aa28.38■■■□□ 2.13
CTSD-214ENST00000637937 UACAQ9BZF9 1416 aa28.38■■■□□ 2.13
CTSD-214ENST00000637937 CTTNBP2Q8WZ74 1663 aa28.38■■■□□ 2.13
CTSD-214ENST00000637937 KIAA0556O60303 1618 aa28.37■■■□□ 2.13
CTSD-214ENST00000637937 ABCC10Q5T3U5 1492 aa28.37■■■□□ 2.13
CTSD-214ENST00000637937 ABCC2Q92887 1545 aa28.34■■■□□ 2.13
CTSD-214ENST00000637937 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
CTSD-214ENST00000637937 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
CTSD-214ENST00000637937 UHRF1BP1LA0JNW5 1464 aa28.32■■■□□ 2.12
CTSD-214ENST00000637937 KIF13AQ9H1H9 1805 aa28.32■■■□□ 2.12
CTSD-214ENST00000637937 DIP2BQ9P265 1576 aa28.27■■■□□ 2.12
CTSD-214ENST00000637937 P3H3Q8IVL6 736 aa28.24■■■□□ 2.11
CTSD-214ENST00000637937 ASXL2Q76L83 1435 aa28.23■■■□□ 2.11
CTSD-214ENST00000637937 PLB1Q6P1J6 1458 aa28.21■■■□□ 2.11
CTSD-214ENST00000637937 KDM5BQ9UGL1 1544 aa28.19■■■□□ 2.1
CTSD-214ENST00000637937 RANGAP1P46060 587 aaPredicted RBP28.19■■■□□ 2.1
CTSD-214ENST00000637937 EHMT2Q96KQ7 1210 aa28.12■■■□□ 2.09
CTSD-214ENST00000637937 ZCCHC11Q5TAX3 1644 aaKnown RBP28.1■■■□□ 2.09
CTSD-214ENST00000637937 ABCA8O94911 1581 aa28.08■■■□□ 2.09
CTSD-214ENST00000637937 KIF21BO75037 1637 aa28.07■■■□□ 2.08
CTSD-214ENST00000637937 ARID3CA6NKF2 412 aa28.05■■■□□ 2.08
CTSD-214ENST00000637937 TSPOAP1O95153 1857 aa28.05■■■□□ 2.08
CTSD-214ENST00000637937 EPRSP07814 1512 aaKnown RBP28.04■■■□□ 2.08
CTSD-214ENST00000637937 UBTFP17480 764 aaKnown RBP28.04■■■□□ 2.08
CTSD-214ENST00000637937 GLI2P10070 1586 aa28.03■■■□□ 2.08
CTSD-214ENST00000637937 SAMD9Q5K651 1589 aa28.03■■■□□ 2.08
CTSD-214ENST00000637937 WDR7Q9Y4E6 1490 aa28.01■■■□□ 2.07
CTSD-214ENST00000637937 KCNH8Q96L42 1107 aa28■■■□□ 2.07
CTSD-214ENST00000637937 FHOD3Q2V2M9 1422 aa27.96■■■□□ 2.07
CTSD-214ENST00000637937 KDM6BO15054 1643 aa27.95■■■□□ 2.06
CTSD-214ENST00000637937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
CTSD-214ENST00000637937 HNRNPUL2Q1KMD3 747 aaKnown RBP27.92■■■□□ 2.06
CTSD-214ENST00000637937 ATP10BO94823 1461 aa27.91■■■□□ 2.06
CTSD-214ENST00000637937 AEBP2Q6ZN18 517 aaPredicted RBP27.9■■■□□ 2.06
CTSD-214ENST00000637937 MAP3K4Q9Y6R4 1608 aa27.87■■■□□ 2.05
CTSD-214ENST00000637937 EFCAB5A4FU69 1503 aa27.87■■■□□ 2.05
CTSD-214ENST00000637937 RAPGEF6Q8TEU7 1601 aa27.86■■■□□ 2.05
CTSD-214ENST00000637937 PPRC1Q5VV67 1664 aaKnown RBP27.86■■■□□ 2.05
CTSD-214ENST00000637937 TEX14Q8IWB6 1497 aa27.85■■■□□ 2.05
CTSD-214ENST00000637937 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
CTSD-214ENST00000637937 NUP153P49790 1475 aaKnown RBP27.8■■■□□ 2.04
CTSD-214ENST00000637937 COL17A1Q9UMD9 1497 aaPredicted RBP27.74■■■□□ 2.03
CTSD-214ENST00000637937 CFAP43Q8NDM7 1665 aa27.74■■■□□ 2.03
CTSD-214ENST00000637937 MAGI3Q5TCQ9 1506 aa27.73■■■□□ 2.03
CTSD-214ENST00000637937 ATP1B4Q9UN42 357 aaPredicted RBP27.73■■■□□ 2.03
CTSD-214ENST00000637937 PLEKHD1A6NEE1 506 aa27.72■■■□□ 2.03
CTSD-214ENST00000637937 ARHGAP35Q9NRY4 1499 aa27.71■■■□□ 2.03
CTSD-214ENST00000637937 FMN1Q68DA7 1419 aa27.67■■■□□ 2.02
CTSD-214ENST00000637937 ABCA9Q8IUA7 1624 aa27.61■■■□□ 2.01
CTSD-214ENST00000637937 CDK13Q14004 1512 aaKnown RBP27.58■■■□□ 2.01
CTSD-214ENST00000637937 KDM4FA0A1W2PPD8 638 aa27.56■■■□□ 2
CTSD-214ENST00000637937 HECW1Q76N89 1606 aa27.53■■■□□ 2
CTSD-214ENST00000637937 PHLDB1Q86UU1 1377 aa27.53■■■□□ 2
CTSD-214ENST00000637937 CDK11AQ9UQ88 783 aaPredicted RBP27.52■■■□□ 2
CTSD-214ENST00000637937 ARAP3Q8WWN8 1544 aa27.51■■□□□ 1.99
CTSD-214ENST00000637937 NEO1Q92859 1461 aa27.48■■□□□ 1.99
CTSD-214ENST00000637937 RAPGEF3O95398 923 aa27.46■■□□□ 1.99
CTSD-214ENST00000637937 CLIP1P30622 1438 aa27.46■■□□□ 1.99
CTSD-214ENST00000637937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.46■■□□□ 1.99
CTSD-214ENST00000637937 CASKIN1Q8WXD9 1431 aa27.41■■□□□ 1.98
CTSD-214ENST00000637937 TTC37Q6PGP7 1564 aa27.4■■□□□ 1.98
CTSD-214ENST00000637937 ADGRL1O94910 1474 aa27.4■■□□□ 1.98
CTSD-214ENST00000637937 FANCAO15360 1455 aa27.38■■□□□ 1.97
CTSD-214ENST00000637937 AKNAQ7Z591 1439 aa27.38■■□□□ 1.97
CTSD-214ENST00000637937 TROQ12816 1431 aaPredicted RBP27.36■■□□□ 1.97
CTSD-214ENST00000637937 PCF11O94913 1555 aaKnown RBP27.35■■□□□ 1.97
CTSD-214ENST00000637937 PLCH2O75038 1416 aa27.33■■□□□ 1.97
CTSD-214ENST00000637937 DENND4BO75064 1496 aaPredicted RBP27.32■■□□□ 1.96
CTSD-214ENST00000637937 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
CTSD-214ENST00000637937 CFAP74Q9C0B2 1584 aa27.31■■□□□ 1.96
CTSD-214ENST00000637937 EFCAB2Q5VUJ9 269 aa27.29■■□□□ 1.96
CTSD-214ENST00000637937 FYCO1Q9BQS8 1478 aa27.29■■□□□ 1.96
CTSD-214ENST00000637937 KIF14Q15058 1648 aa27.29■■□□□ 1.96
CTSD-214ENST00000637937 LRRIQ1Q96JM4 1722 aa27.28■■□□□ 1.96
CTSD-214ENST00000637937 FRMPD1Q5SYB0 1578 aa27.26■■□□□ 1.95
CTSD-214ENST00000637937 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
CTSD-214ENST00000637937 SCAPERQ9BY12 1400 aa27.24■■□□□ 1.95
CTSD-214ENST00000637937 LOC105371045A0A1W2PR82 267 aa27.23■■□□□ 1.95
CTSD-214ENST00000637937 ARID4BQ4LE39 1312 aaPredicted RBP27.21■■□□□ 1.95
CTSD-214ENST00000637937 MYO5CQ9NQX4 1742 aa27.19■■□□□ 1.94
CTSD-214ENST00000637937 ARHGAP5Q13017 1502 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms