RNA–Protein interactions for RNA: ENST00000637722.1

ARID1B-228, Transcript of AT-rich interaction domain 1B, humanhuman

Gene ARID1B, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-228ENST00000637722 WDR97A6NE52 1622 aa9.64□□□□□ -0.87
ARID1B-228ENST00000637722 AQRO60306 1485 aaKnown RBP eCLIP9.63□□□□□ -0.87
ARID1B-228ENST00000637722 PRXQ9BXM0 1461 aa9.63□□□□□ -0.87
ARID1B-228ENST00000637722 ERICH3Q5RHP9 1530 aa9.63□□□□□ -0.87
ARID1B-228ENST00000637722 FMN1Q68DA7 1419 aa9.62□□□□□ -0.87
ARID1B-228ENST00000637722 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
ARID1B-228ENST00000637722 PLEKHD1A6NEE1 506 aa9.61□□□□□ -0.87
ARID1B-228ENST00000637722 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
ARID1B-228ENST00000637722 FHOD3Q2V2M9 1422 aa9.6□□□□□ -0.87
ARID1B-228ENST00000637722 IFT140Q96RY7 1462 aa9.6□□□□□ -0.87
ARID1B-228ENST00000637722 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
ARID1B-228ENST00000637722 CARMIL2Q6F5E8 1435 aa9.6□□□□□ -0.87
ARID1B-228ENST00000637722 URB2Q14146 1524 aaKnown RBP9.59□□□□□ -0.87
ARID1B-228ENST00000637722 GRIN2BQ13224 1484 aa9.59□□□□□ -0.87
ARID1B-228ENST00000637722 NEUROD1Q13562 356 aa9.58□□□□□ -0.88
ARID1B-228ENST00000637722 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
ARID1B-228ENST00000637722 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
ARID1B-228ENST00000637722 CCNB3Q8WWL7 1395 aa9.55□□□□□ -0.88
ARID1B-228ENST00000637722 KCNH8Q96L42 1107 aa9.53□□□□□ -0.88
ARID1B-228ENST00000637722 TSPY4P0CV99 314 aa9.53□□□□□ -0.88
ARID1B-228ENST00000637722 TSPY10P0CW01 314 aa9.53□□□□□ -0.88
ARID1B-228ENST00000637722 CFDP1Q9UEE9 299 aaPredicted RBP9.52□□□□□ -0.88
ARID1B-228ENST00000637722 ARHGAP35Q9NRY4 1499 aa9.51□□□□□ -0.89
ARID1B-228ENST00000637722 ARAP1Q96P48 1450 aa9.5□□□□□ -0.89
ARID1B-228ENST00000637722 RRP7BPQ9NSQ0 103 aa9.49□□□□□ -0.89
ARID1B-228ENST00000637722 SNAPC4Q5SXM2 1469 aa9.48□□□□□ -0.89
ARID1B-228ENST00000637722 CUL7Q14999 1698 aa9.48□□□□□ -0.89
ARID1B-228ENST00000637722 DIEXFQ68CQ4 756 aaKnown RBP9.46□□□□□ -0.9
ARID1B-228ENST00000637722 KIF21AQ7Z4S6 1674 aa9.46□□□□□ -0.9
ARID1B-228ENST00000637722 ZNF608Q9ULD9 1512 aaPredicted RBP9.45□□□□□ -0.9
ARID1B-228ENST00000637722 EFCAB5A4FU69 1503 aa9.45□□□□□ -0.9
ARID1B-228ENST00000637722 CENPBP07199 599 aaPredicted RBP9.45□□□□□ -0.9
ARID1B-228ENST00000637722 ZNF316A6NFI3 1004 aaPredicted RBP9.45□□□□□ -0.9
ARID1B-228ENST00000637722 PTPRGP23470 1445 aa9.44□□□□□ -0.9
ARID1B-228ENST00000637722 CASKIN1Q8WXD9 1431 aa9.43□□□□□ -0.9
ARID1B-228ENST00000637722 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
ARID1B-228ENST00000637722 TONSLQ96HA7 1378 aa9.43□□□□□ -0.9
ARID1B-228ENST00000637722 CCDC18Q5T9S5 1454 aa9.42□□□□□ -0.9
ARID1B-228ENST00000637722 OSCARQ8IYS5 282 aa9.42□□□□□ -0.9
ARID1B-228ENST00000637722 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
ARID1B-228ENST00000637722 KIAA0586Q9BVV6 1533 aa9.42□□□□□ -0.9
ARID1B-228ENST00000637722 ZNF326Q5BKZ1 582 aaKnown RBP9.41□□□□□ -0.9
ARID1B-228ENST00000637722 MAGI1Q96QZ7 1491 aaPredicted RBP9.41□□□□□ -0.9
ARID1B-228ENST00000637722 SYNJ2O15056 1496 aa9.4□□□□□ -0.9
ARID1B-228ENST00000637722 FYCO1Q9BQS8 1478 aa9.4□□□□□ -0.9
ARID1B-228ENST00000637722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.4□□□□□ -0.91
ARID1B-228ENST00000637722 CLSPNQ9HAW4 1339 aa9.4□□□□□ -0.91
ARID1B-228ENST00000637722 LRRC9Q6ZRR7 1453 aa9.4□□□□□ -0.91
ARID1B-228ENST00000637722 SLC4A1APQ9BWU0 796 aaKnown RBP9.39□□□□□ -0.91
ARID1B-228ENST00000637722 SETD5Q9C0A6 1442 aa9.39□□□□□ -0.91
ARID1B-228ENST00000637722 GRIN2AQ12879 1464 aa9.39□□□□□ -0.91
ARID1B-228ENST00000637722 YTHDC1Q96MU7 727 aaKnown RBP9.39□□□□□ -0.91
ARID1B-228ENST00000637722 IQGAP2Q13576 1575 aa9.38□□□□□ -0.91
ARID1B-228ENST00000637722 WDR62O43379 1518 aa9.38□□□□□ -0.91
ARID1B-228ENST00000637722 PRG4Q92954 1404 aaPredicted RBP9.37□□□□□ -0.91
ARID1B-228ENST00000637722 RAB3GAP2Q9H2M9 1393 aa9.35□□□□□ -0.91
ARID1B-228ENST00000637722 PHLDB1Q86UU1 1377 aa9.35□□□□□ -0.91
ARID1B-228ENST00000637722 EFCAB2Q5VUJ9 269 aa9.35□□□□□ -0.91
ARID1B-228ENST00000637722 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
ARID1B-228ENST00000637722 FGD6Q6ZV73 1430 aa9.32□□□□□ -0.92
ARID1B-228ENST00000637722 SIN3AQ96ST3 1273 aa9.32□□□□□ -0.92
ARID1B-228ENST00000637722 MYOM3Q5VTT5 1437 aa9.32□□□□□ -0.92
ARID1B-228ENST00000637722 NCOA2Q15596 1464 aa9.32□□□□□ -0.92
ARID1B-228ENST00000637722 ABCA5Q8WWZ7 1642 aa9.31□□□□□ -0.92
ARID1B-228ENST00000637722 RSPH4AQ5TD94 716 aa9.31□□□□□ -0.92
ARID1B-228ENST00000637722 ADAMTS12P58397 1594 aa9.3□□□□□ -0.92
ARID1B-228ENST00000637722 RRBP1Q9P2E9 1410 aaKnown RBP9.3□□□□□ -0.92
ARID1B-228ENST00000637722 HNRNPMP52272 730 aaKnown RBP eCLIP9.3□□□□□ -0.92
ARID1B-228ENST00000637722 PCF11O94913 1555 aaKnown RBP9.3□□□□□ -0.92
ARID1B-228ENST00000637722 HECW1Q76N89 1606 aa9.3□□□□□ -0.92
ARID1B-228ENST00000637722 TARBP1Q13395 1621 aaKnown RBP9.3□□□□□ -0.92
ARID1B-228ENST00000637722 ANKRD30AQ9BXX3 1397 aa9.3□□□□□ -0.92
ARID1B-228ENST00000637722 EIF4G3O43432 1585 aaKnown RBP9.3□□□□□ -0.92
ARID1B-228ENST00000637722 CNGB1Q14028 1251 aaPredicted RBP9.29□□□□□ -0.92
ARID1B-228ENST00000637722 ESF1Q9H501 851 aaKnown RBP9.29□□□□□ -0.92
ARID1B-228ENST00000637722 MAP3K1Q13233 1512 aa9.29□□□□□ -0.92
ARID1B-228ENST00000637722 CTTNBP2Q8WZ74 1663 aa9.28□□□□□ -0.92
ARID1B-228ENST00000637722 EPRSP07814 1512 aaKnown RBP9.28□□□□□ -0.92
ARID1B-228ENST00000637722 EHBP1L1Q8N3D4 1523 aa9.28□□□□□ -0.92
ARID1B-228ENST00000637722 CHGAP10645 457 aaKnown RBP9.27□□□□□ -0.92
ARID1B-228ENST00000637722 CYB5RLQ6IPT4 315 aa9.27□□□□□ -0.92
ARID1B-228ENST00000637722 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.92
ARID1B-228ENST00000637722 ANP32CO43423 234 aa9.26□□□□□ -0.93
ARID1B-228ENST00000637722 KDM2AQ9Y2K7 1162 aa9.26□□□□□ -0.93
ARID1B-228ENST00000637722 PBRM1Q86U86 1689 aa9.26□□□□□ -0.93
ARID1B-228ENST00000637722 TROQ12816 1431 aaPredicted RBP9.26□□□□□ -0.93
ARID1B-228ENST00000637722 ZNF644Q9H582 1327 aaPredicted RBP9.26□□□□□ -0.93
ARID1B-228ENST00000637722 MPHOSPH9Q99550 1183 aa9.26□□□□□ -0.93
ARID1B-228ENST00000637722 DHX57Q6P158 1386 aaKnown RBP9.25□□□□□ -0.93
ARID1B-228ENST00000637722 CDK13Q14004 1512 aaKnown RBP9.25□□□□□ -0.93
ARID1B-228ENST00000637722 PLB1Q6P1J6 1458 aa9.25□□□□□ -0.93
ARID1B-228ENST00000637722 UACAQ9BZF9 1416 aa9.24□□□□□ -0.93
ARID1B-228ENST00000637722 PELP1Q8IZL8 1130 aaKnown RBP9.23□□□□□ -0.93
ARID1B-228ENST00000637722 UGGT2Q9NYU1 1516 aa9.23□□□□□ -0.93
ARID1B-228ENST00000637722 PKD2Q13563 968 aa9.23□□□□□ -0.93
ARID1B-228ENST00000637722 MIA2Q96PC5 1412 aa9.23□□□□□ -0.93
ARID1B-228ENST00000637722 NUP155O75694 1391 aa9.23□□□□□ -0.93
ARID1B-228ENST00000637722 SPAG9O60271 1321 aaKnown RBP9.23□□□□□ -0.93
ARID1B-228ENST00000637722 DDX10Q13206 875 aaKnown RBP9.23□□□□□ -0.93
ARID1B-228ENST00000637722 RGL3Q3MIN7 710 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms