RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-215ENST00000637657 MAP3K1Q13233 1512 aa18.09■□□□□ 0.49
PCCA-215ENST00000637657 RAB3GAP2Q9H2M9 1393 aa18.09■□□□□ 0.49
PCCA-215ENST00000637657 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
PCCA-215ENST00000637657 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
PCCA-215ENST00000637657 SETD5Q9C0A6 1442 aa18.06■□□□□ 0.48
PCCA-215ENST00000637657 RTL5Q5HYW3 569 aaPredicted RBP18.02■□□□□ 0.48
PCCA-215ENST00000637657 PRXQ9BXM0 1461 aa18.02■□□□□ 0.48
PCCA-215ENST00000637657 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
PCCA-215ENST00000637657 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
PCCA-215ENST00000637657 KANK4Q5T7N3 995 aaPredicted RBP17.97■□□□□ 0.47
PCCA-215ENST00000637657 ANO8Q9HCE9 1232 aaPredicted RBP17.96■□□□□ 0.47
PCCA-215ENST00000637657 UBE2Q2Q8WVN8 375 aa17.94■□□□□ 0.46
PCCA-215ENST00000637657 ANP32AP39687 249 aaKnown RBP17.93■□□□□ 0.46
PCCA-215ENST00000637657 HNRNPUQ00839 825 aaKnown RBP eCLIP17.93■□□□□ 0.46
PCCA-215ENST00000637657 USP35Q9P2H5 1018 aa17.91■□□□□ 0.46
PCCA-215ENST00000637657 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
PCCA-215ENST00000637657 IPO9Q96P70 1041 aaKnown RBP17.89■□□□□ 0.45
PCCA-215ENST00000637657 FHAD1B1AJZ9 1412 aa17.88■□□□□ 0.45
PCCA-215ENST00000637657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.87■□□□□ 0.45
PCCA-215ENST00000637657 NBR1Q14596 966 aa17.85■□□□□ 0.45
PCCA-215ENST00000637657 C11orf95C9JLR9 678 aaPredicted RBP17.84■□□□□ 0.45
PCCA-215ENST00000637657 ZBTB47Q9UFB7 747 aaPredicted RBP17.84■□□□□ 0.45
PCCA-215ENST00000637657 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.45
PCCA-215ENST00000637657 ARHGAP35Q9NRY4 1499 aa17.83■□□□□ 0.44
PCCA-215ENST00000637657 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
PCCA-215ENST00000637657 ZBED9Q6R2W3 1325 aa17.82■□□□□ 0.44
PCCA-215ENST00000637657 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
PCCA-215ENST00000637657 CFAP43Q8NDM7 1665 aa17.8■□□□□ 0.44
PCCA-215ENST00000637657 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
PCCA-215ENST00000637657 LRRC9Q6ZRR7 1453 aa17.78■□□□□ 0.44
PCCA-215ENST00000637657 NCAPD3P42695 1498 aa17.78■□□□□ 0.44
PCCA-215ENST00000637657 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.44
PCCA-215ENST00000637657 NCOA2Q15596 1464 aa17.77■□□□□ 0.44
PCCA-215ENST00000637657 PAK3O75914 559 aaPredicted RBP17.77■□□□□ 0.43
PCCA-215ENST00000637657 IRX6P78412 446 aaPredicted RBP17.77■□□□□ 0.43
PCCA-215ENST00000637657 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
PCCA-215ENST00000637657 CCDC136Q96JN2 1154 aa17.74■□□□□ 0.43
PCCA-215ENST00000637657 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
PCCA-215ENST00000637657 WASHC2CQ9Y4E1 1318 aa17.72■□□□□ 0.43
PCCA-215ENST00000637657 B4GALNT3Q6L9W6 998 aa17.72■□□□□ 0.43
PCCA-215ENST00000637657 CNTLNQ9NXG0 1405 aa17.71■□□□□ 0.43
PCCA-215ENST00000637657 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.42
PCCA-215ENST00000637657 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
PCCA-215ENST00000637657 SMG6Q86US8 1419 aaKnown RBP17.68■□□□□ 0.42
PCCA-215ENST00000637657 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
PCCA-215ENST00000637657 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
PCCA-215ENST00000637657 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
PCCA-215ENST00000637657 POLR1AO95602 1720 aaPredicted RBP17.64■□□□□ 0.41
PCCA-215ENST00000637657 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
PCCA-215ENST00000637657 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
PCCA-215ENST00000637657 CCDC18Q5T9S5 1454 aa17.61■□□□□ 0.41
PCCA-215ENST00000637657 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
PCCA-215ENST00000637657 KDM5BQ9UGL1 1544 aa17.59■□□□□ 0.41
PCCA-215ENST00000637657 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
PCCA-215ENST00000637657 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
PCCA-215ENST00000637657 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
PCCA-215ENST00000637657 TCERG1O14776 1098 aaKnown RBP17.57■□□□□ 0.4
PCCA-215ENST00000637657 NEFMP07197 916 aa17.57■□□□□ 0.4
PCCA-215ENST00000637657 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
PCCA-215ENST00000637657 PTPN23Q9H3S7 1636 aa17.56■□□□□ 0.4
PCCA-215ENST00000637657 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
PCCA-215ENST00000637657 MS4A1P11836 297 aa17.55■□□□□ 0.4
PCCA-215ENST00000637657 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.4
PCCA-215ENST00000637657 FYCO1Q9BQS8 1478 aa17.55■□□□□ 0.4
PCCA-215ENST00000637657 DDRGK1Q96HY6 314 aa17.54■□□□□ 0.4
PCCA-215ENST00000637657 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCCA-215ENST00000637657 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
PCCA-215ENST00000637657 MRS2Q9HD23 443 aa17.54■□□□□ 0.4
PCCA-215ENST00000637657 PCF11O94913 1555 aaKnown RBP17.51■□□□□ 0.39
PCCA-215ENST00000637657 GSE1Q14687 1217 aa17.5■□□□□ 0.39
PCCA-215ENST00000637657 HECW1Q76N89 1606 aa17.5■□□□□ 0.39
PCCA-215ENST00000637657 CUX1P39880 1505 aa17.5■□□□□ 0.39
PCCA-215ENST00000637657 RTN4Q9NQC3 1192 aaKnown RBP17.5■□□□□ 0.39
PCCA-215ENST00000637657 FMN1Q68DA7 1419 aa17.49■□□□□ 0.39
PCCA-215ENST00000637657 HSPA5P11021 654 aaKnown RBP17.49■□□□□ 0.39
PCCA-215ENST00000637657 GLIPR1L2Q4G1C9 344 aa17.49■□□□□ 0.39
PCCA-215ENST00000637657 CCDC7Q96M83 1385 aa17.49■□□□□ 0.39
PCCA-215ENST00000637657 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.48■□□□□ 0.39
PCCA-215ENST00000637657 EFCAB5A4FU69 1503 aa17.48■□□□□ 0.39
PCCA-215ENST00000637657 FGD6Q6ZV73 1430 aa17.48■□□□□ 0.39
PCCA-215ENST00000637657 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
PCCA-215ENST00000637657 AKNAQ7Z591 1439 aa17.44■□□□□ 0.38
PCCA-215ENST00000637657 BICRAQ9NZM4 1560 aa17.44■□□□□ 0.38
PCCA-215ENST00000637657 CASKIN1Q8WXD9 1431 aa17.44■□□□□ 0.38
PCCA-215ENST00000637657 FAM43AQ8N2R8 423 aa17.44■□□□□ 0.38
PCCA-215ENST00000637657 GCC2Q8IWJ2 1684 aa17.42■□□□□ 0.38
PCCA-215ENST00000637657 NAIPQ13075 1403 aa17.42■□□□□ 0.38
PCCA-215ENST00000637657 BACH2Q9BYV9 841 aa17.41■□□□□ 0.38
PCCA-215ENST00000637657 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
PCCA-215ENST00000637657 CCDC184Q52MB2 194 aa17.39■□□□□ 0.38
PCCA-215ENST00000637657 PDE4AP27815 886 aa17.39■□□□□ 0.37
PCCA-215ENST00000637657 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
PCCA-215ENST00000637657 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
PCCA-215ENST00000637657 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
PCCA-215ENST00000637657 PKNOX2Q96KN3 472 aa17.35■□□□□ 0.37
PCCA-215ENST00000637657 MIA2Q96PC5 1412 aa17.35■□□□□ 0.37
PCCA-215ENST00000637657 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
PCCA-215ENST00000637657 IGF1RP08069 1367 aa17.34■□□□□ 0.37
PCCA-215ENST00000637657 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
PCCA-215ENST00000637657 BRPF3Q9ULD4 1205 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms