RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-215ENST00000637657 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
PCCA-215ENST00000637657 HRCP23327 699 aa22.08■■□□□ 1.13
PCCA-215ENST00000637657 PELP1Q8IZL8 1130 aaKnown RBP22.06■■□□□ 1.12
PCCA-215ENST00000637657 MYT1Q01538 1121 aa21.47■■□□□ 1.03
PCCA-215ENST00000637657 DCAF1Q9Y4B6 1507 aa21.27■■□□□ 1
PCCA-215ENST00000637657 PCGF6Q9BYE7 350 aa21.25■□□□□ 0.99
PCCA-215ENST00000637657 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
PCCA-215ENST00000637657 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
PCCA-215ENST00000637657 CCDC180Q9P1Z9 1646 aa21.09■□□□□ 0.97
PCCA-215ENST00000637657 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
PCCA-215ENST00000637657 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
PCCA-215ENST00000637657 ZEB1P37275 1124 aaPredicted RBP21.04■□□□□ 0.96
PCCA-215ENST00000637657 SHROOM4Q9ULL8 1493 aa20.99■□□□□ 0.95
PCCA-215ENST00000637657 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
PCCA-215ENST00000637657 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
PCCA-215ENST00000637657 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
PCCA-215ENST00000637657 ACIN1Q9UKV3 1341 aaKnown RBP20.43■□□□□ 0.86
PCCA-215ENST00000637657 CENPBP07199 599 aaPredicted RBP20.33■□□□□ 0.85
PCCA-215ENST00000637657 TTBK1Q5TCY1 1321 aaPredicted RBP20.28■□□□□ 0.84
PCCA-215ENST00000637657 LOC105371045A0A1W2PR82 267 aa20.28■□□□□ 0.84
PCCA-215ENST00000637657 NEUROD1Q13562 356 aa20.14■□□□□ 0.81
PCCA-215ENST00000637657 GTF3C3Q9Y5Q9 886 aa20.11■□□□□ 0.81
PCCA-215ENST00000637657 DIEXFQ68CQ4 756 aaKnown RBP19.93■□□□□ 0.78
PCCA-215ENST00000637657 ABCC9O60706 1549 aa19.83■□□□□ 0.76
PCCA-215ENST00000637657 CLSPNQ9HAW4 1339 aa19.77■□□□□ 0.76
PCCA-215ENST00000637657 CCER1Q8TC90 406 aaPredicted RBP19.76■□□□□ 0.75
PCCA-215ENST00000637657 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
PCCA-215ENST00000637657 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
PCCA-215ENST00000637657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
PCCA-215ENST00000637657 ZNF316A6NFI3 1004 aaPredicted RBP19.58■□□□□ 0.73
PCCA-215ENST00000637657 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
PCCA-215ENST00000637657 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
PCCA-215ENST00000637657 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
PCCA-215ENST00000637657 ANP32EQ9BTT0 268 aa19.42■□□□□ 0.7
PCCA-215ENST00000637657 BCL11AQ9H165 835 aa19.37■□□□□ 0.69
PCCA-215ENST00000637657 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
PCCA-215ENST00000637657 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
PCCA-215ENST00000637657 MIER1Q8N108 512 aa19.24■□□□□ 0.67
PCCA-215ENST00000637657 SUPT16HQ9Y5B9 1047 aaKnown RBP19.18■□□□□ 0.66
PCCA-215ENST00000637657 TSHZ2Q9NRE2 1034 aa19.12■□□□□ 0.65
PCCA-215ENST00000637657 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
PCCA-215ENST00000637657 TNIKQ9UKE5 1360 aa19.08■□□□□ 0.65
PCCA-215ENST00000637657 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
PCCA-215ENST00000637657 EEA1Q15075 1411 aa19.06■□□□□ 0.64
PCCA-215ENST00000637657 SCRIBQ14160 1630 aa19.02■□□□□ 0.64
PCCA-215ENST00000637657 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
PCCA-215ENST00000637657 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
PCCA-215ENST00000637657 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
PCCA-215ENST00000637657 SLC24A1O60721 1099 aa18.91■□□□□ 0.62
PCCA-215ENST00000637657 MYT1LQ9UL68 1186 aa18.88■□□□□ 0.61
PCCA-215ENST00000637657 GOLGA3Q08378 1498 aa18.83■□□□□ 0.61
PCCA-215ENST00000637657 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.6
PCCA-215ENST00000637657 ERICH6Q7L0X2 663 aa18.82■□□□□ 0.6
PCCA-215ENST00000637657 WIZO95785 1651 aa18.79■□□□□ 0.6
PCCA-215ENST00000637657 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
PCCA-215ENST00000637657 CECR2Q9BXF3 1484 aa18.7■□□□□ 0.58
PCCA-215ENST00000637657 NACADO15069 1562 aa18.7■□□□□ 0.58
PCCA-215ENST00000637657 KIF21BO75037 1637 aa18.69■□□□□ 0.58
PCCA-215ENST00000637657 RBM19Q9Y4C8 960 aaKnown RBP18.68■□□□□ 0.58
PCCA-215ENST00000637657 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
PCCA-215ENST00000637657 ABCC8Q09428 1581 aa18.67■□□□□ 0.58
PCCA-215ENST00000637657 NEFLP07196 543 aa18.67■□□□□ 0.58
PCCA-215ENST00000637657 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
PCCA-215ENST00000637657 PRKCSHP14314 528 aaPredicted RBP18.66■□□□□ 0.58
PCCA-215ENST00000637657 CEP164Q9UPV0 1460 aa18.66■□□□□ 0.58
PCCA-215ENST00000637657 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
PCCA-215ENST00000637657 FANCIQ9NVI1 1328 aa18.64■□□□□ 0.57
PCCA-215ENST00000637657 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
PCCA-215ENST00000637657 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
PCCA-215ENST00000637657 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
PCCA-215ENST00000637657 SOGA1O94964 1423 aa18.61■□□□□ 0.57
PCCA-215ENST00000637657 APLP2Q06481 763 aa18.59■□□□□ 0.57
PCCA-215ENST00000637657 CLIP1P30622 1438 aa18.56■□□□□ 0.56
PCCA-215ENST00000637657 FKBP8Q14318 412 aa18.56■□□□□ 0.56
PCCA-215ENST00000637657 CUX2O14529 1486 aa18.54■□□□□ 0.56
PCCA-215ENST00000637657 SMARCA2P51531 1590 aa18.52■□□□□ 0.56
PCCA-215ENST00000637657 CCER2I3L3R5 266 aa18.44■□□□□ 0.54
PCCA-215ENST00000637657 BCANQ96GW7 911 aa18.43■□□□□ 0.54
PCCA-215ENST00000637657 ERICH6BQ5W0A0 696 aa18.42■□□□□ 0.54
PCCA-215ENST00000637657 RUSC2Q8N2Y8 1516 aa18.41■□□□□ 0.54
PCCA-215ENST00000637657 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
PCCA-215ENST00000637657 MSH5O43196 834 aa18.4■□□□□ 0.54
PCCA-215ENST00000637657 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
PCCA-215ENST00000637657 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
PCCA-215ENST00000637657 TIMELESSQ9UNS1 1208 aa18.32■□□□□ 0.52
PCCA-215ENST00000637657 DEKP35659 375 aaKnown RBP18.28■□□□□ 0.52
PCCA-215ENST00000637657 ERICH3Q5RHP9 1530 aa18.25■□□□□ 0.51
PCCA-215ENST00000637657 KCNH8Q96L42 1107 aa18.24■□□□□ 0.51
PCCA-215ENST00000637657 ANP32CO43423 234 aa18.23■□□□□ 0.51
PCCA-215ENST00000637657 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
PCCA-215ENST00000637657 MAPKBP1O60336 1514 aa18.2■□□□□ 0.5
PCCA-215ENST00000637657 PPP1R15AO75807 674 aaPredicted RBP18.2■□□□□ 0.5
PCCA-215ENST00000637657 CCNB3Q8WWL7 1395 aa18.19■□□□□ 0.5
PCCA-215ENST00000637657 RAPGEF2Q9Y4G8 1499 aa18.18■□□□□ 0.5
PCCA-215ENST00000637657 ITGAEP38570 1179 aa18.17■□□□□ 0.5
PCCA-215ENST00000637657 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
PCCA-215ENST00000637657 ARAP1Q96P48 1450 aa18.13■□□□□ 0.49
PCCA-215ENST00000637657 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
PCCA-215ENST00000637657 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
PCCA-215ENST00000637657 NOP58Q9Y2X3 529 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms